data_8INY # _model_server_result.job_id RPRR7oSsQiqusH5MB_3hUA _model_server_result.datetime_utc '2025-06-30 14:16:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8iny # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 8INY # _exptl.entry_id 8INY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 531.878 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 6-[(6-chloranyl-2-methyl-indazol-5-yl)amino]-3-[(1-methyl-1,2,4-triazol-3-yl)methyl]-1-[[2,4,5-tris(fluoranyl)phenyl]methyl]-1,3,5-triazine-2,4-dione _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 114.7 _cell.angle_gamma 90 _cell.entry_id 8INY _cell.length_a 96.351 _cell.length_b 82.076 _cell.length_c 51.476 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8INY _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_556 -x,y,-z+1 -1 0 0 0 1 0 0 0 -1 -21.510125 0 46.766367 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C22 H17 Cl F3 N9 O2' _chem_comp.formula_weight 531.878 _chem_comp.id 7YY _chem_comp.mon_nstd_flag . _chem_comp.name 6-[(6-chloranyl-2-methyl-indazol-5-yl)amino]-3-[(1-methyl-1,2,4-triazol-3-yl)methyl]-1-[[2,4,5-tris(fluoranyl)phenyl]methyl]-1,3,5-triazine-2,4-dione _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C18 N17 7YY sing 1 n n N17 N19 7YY sing 2 n y N17 C16 7YY sing 3 n y N19 C20 7YY doub 4 n y C16 C15 7YY doub 5 n y C20 C15 7YY sing 6 n y C20 C21 7YY sing 7 n y C15 C14 7YY sing 8 n y C21 C22 7YY doub 9 n y C14 C13 7YY doub 10 n y C22 C13 7YY sing 11 n y C22 CL2 7YY sing 12 n n C13 N12 7YY sing 13 n n N12 C11 7YY sing 14 n n N10 C11 7YY doub 15 n n N10 C08 7YY sing 16 n n C11 N24 7YY sing 17 n n O09 C08 7YY doub 18 n n C08 N07 7YY sing 19 n n N24 C25 7YY sing 20 n n N24 C35 7YY sing 21 n n C25 C26 7YY sing 22 n n C26 C34 7YY doub 23 n y C26 C27 7YY sing 24 n y C34 C32 7YY sing 25 n y F28 C27 7YY sing 26 n n C27 C29 7YY doub 27 n y C32 F33 7YY sing 28 n n C32 C30 7YY doub 29 n y N07 C35 7YY sing 30 n n N07 C06 7YY sing 31 n n C35 O36 7YY doub 32 n n C29 C30 7YY sing 33 n y C30 F31 7YY sing 34 n n N37 C05 7YY doub 35 n y N37 N02 7YY sing 36 n y C06 C05 7YY sing 37 n n C01 N02 7YY sing 38 n n C05 N04 7YY sing 39 n y N02 C03 7YY sing 40 n y N04 C03 7YY doub 41 n y C14 H1 7YY sing 42 n n C01 H2 7YY sing 43 n n C01 H3 7YY sing 44 n n C01 H4 7YY sing 45 n n C03 H5 7YY sing 46 n n C06 H6 7YY sing 47 n n C06 H7 7YY sing 48 n n N12 H8 7YY sing 49 n n C16 H9 7YY sing 50 n n C18 H10 7YY sing 51 n n C18 H11 7YY sing 52 n n C18 H12 7YY sing 53 n n C21 H13 7YY sing 54 n n C25 H14 7YY sing 55 n n C25 H15 7YY sing 56 n n C29 H16 7YY sing 57 n n C34 H17 7YY sing 58 n n # _atom_sites.entry_id 8INY _atom_sites.fract_transf_matrix[1][1] 0.010379 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004774 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012184 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021383 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 7YY A 1 401 401 7YY 7YY . C 3 HOH A 1 501 53 HOH HOH . C 3 HOH A 2 502 176 HOH HOH . C 3 HOH A 3 503 78 HOH HOH . C 3 HOH A 4 504 194 HOH HOH . C 3 HOH A 5 505 164 HOH HOH . C 3 HOH A 6 506 34 HOH HOH . C 3 HOH A 7 507 35 HOH HOH . C 3 HOH A 8 508 184 HOH HOH . C 3 HOH A 9 509 85 HOH HOH . C 3 HOH A 10 510 148 HOH HOH . C 3 HOH A 11 511 84 HOH HOH . C 3 HOH A 12 512 89 HOH HOH . C 3 HOH A 13 513 33 HOH HOH . C 3 HOH A 14 514 68 HOH HOH . C 3 HOH A 15 515 143 HOH HOH . C 3 HOH A 16 516 94 HOH HOH . C 3 HOH A 17 517 7 HOH HOH . C 3 HOH A 18 518 41 HOH HOH . C 3 HOH A 19 519 125 HOH HOH . C 3 HOH A 20 520 160 HOH HOH . C 3 HOH A 21 521 17 HOH HOH . C 3 HOH A 22 522 29 HOH HOH . C 3 HOH A 23 523 109 HOH HOH . C 3 HOH A 24 524 18 HOH HOH . C 3 HOH A 25 525 15 HOH HOH . C 3 HOH A 26 526 87 HOH HOH . C 3 HOH A 27 527 93 HOH HOH . C 3 HOH A 28 528 10 HOH HOH . C 3 HOH A 29 529 134 HOH HOH . C 3 HOH A 30 530 32 HOH HOH . C 3 HOH A 31 531 169 HOH HOH . C 3 HOH A 32 532 91 HOH HOH . C 3 HOH A 33 533 22 HOH HOH . C 3 HOH A 34 534 177 HOH HOH . C 3 HOH A 35 535 21 HOH HOH . C 3 HOH A 36 536 80 HOH HOH . C 3 HOH A 37 537 16 HOH HOH . C 3 HOH A 38 538 46 HOH HOH . C 3 HOH A 39 539 60 HOH HOH . C 3 HOH A 40 540 63 HOH HOH . C 3 HOH A 41 541 83 HOH HOH . C 3 HOH A 42 542 37 HOH HOH . C 3 HOH A 43 543 167 HOH HOH . C 3 HOH A 44 544 82 HOH HOH . C 3 HOH A 45 545 107 HOH HOH . C 3 HOH A 46 546 188 HOH HOH . C 3 HOH A 47 547 99 HOH HOH . C 3 HOH A 48 548 5 HOH HOH . C 3 HOH A 49 549 4 HOH HOH . C 3 HOH A 50 550 110 HOH HOH . C 3 HOH A 51 551 172 HOH HOH . C 3 HOH A 52 552 3 HOH HOH . C 3 HOH A 53 553 20 HOH HOH . C 3 HOH A 54 554 39 HOH HOH . C 3 HOH A 55 555 1 HOH HOH . C 3 HOH A 56 556 19 HOH HOH . C 3 HOH A 57 557 101 HOH HOH . C 3 HOH A 58 558 48 HOH HOH . C 3 HOH A 59 559 66 HOH HOH . C 3 HOH A 60 560 123 HOH HOH . C 3 HOH A 61 561 70 HOH HOH . C 3 HOH A 62 562 126 HOH HOH . C 3 HOH A 63 563 103 HOH HOH . C 3 HOH A 64 564 44 HOH HOH . C 3 HOH A 65 565 64 HOH HOH . C 3 HOH A 66 566 149 HOH HOH . C 3 HOH A 67 567 24 HOH HOH . C 3 HOH A 68 568 96 HOH HOH . C 3 HOH A 69 569 73 HOH HOH . C 3 HOH A 70 570 30 HOH HOH . C 3 HOH A 71 571 137 HOH HOH . C 3 HOH A 72 572 170 HOH HOH . C 3 HOH A 73 573 13 HOH HOH . C 3 HOH A 74 574 86 HOH HOH . C 3 HOH A 75 575 12 HOH HOH . C 3 HOH A 76 576 98 HOH HOH . C 3 HOH A 77 577 155 HOH HOH . C 3 HOH A 78 578 105 HOH HOH . C 3 HOH A 79 579 77 HOH HOH . C 3 HOH A 80 580 28 HOH HOH . C 3 HOH A 81 581 173 HOH HOH . C 3 HOH A 82 582 196 HOH HOH . C 3 HOH A 83 583 118 HOH HOH . C 3 HOH A 84 584 23 HOH HOH . C 3 HOH A 85 585 9 HOH HOH . C 3 HOH A 86 586 114 HOH HOH . C 3 HOH A 87 587 50 HOH HOH . C 3 HOH A 88 588 43 HOH HOH . C 3 HOH A 89 589 62 HOH HOH . C 3 HOH A 90 590 106 HOH HOH . C 3 HOH A 91 591 141 HOH HOH . C 3 HOH A 92 592 154 HOH HOH . C 3 HOH A 93 593 52 HOH HOH . C 3 HOH A 94 594 72 HOH HOH . C 3 HOH A 95 595 158 HOH HOH . C 3 HOH A 96 596 8 HOH HOH . C 3 HOH A 97 597 61 HOH HOH . C 3 HOH A 98 598 92 HOH HOH . C 3 HOH A 99 599 128 HOH HOH . C 3 HOH A 100 600 27 HOH HOH . C 3 HOH A 101 601 56 HOH HOH . C 3 HOH A 102 602 121 HOH HOH . C 3 HOH A 103 603 2 HOH HOH . C 3 HOH A 104 604 132 HOH HOH . C 3 HOH A 105 605 11 HOH HOH . C 3 HOH A 106 606 54 HOH HOH . C 3 HOH A 107 607 153 HOH HOH . C 3 HOH A 108 608 45 HOH HOH . C 3 HOH A 109 609 74 HOH HOH . C 3 HOH A 110 610 150 HOH HOH . C 3 HOH A 111 611 127 HOH HOH . C 3 HOH A 112 612 145 HOH HOH . C 3 HOH A 113 613 58 HOH HOH . C 3 HOH A 114 614 40 HOH HOH . C 3 HOH A 115 615 124 HOH HOH . C 3 HOH A 116 616 38 HOH HOH . C 3 HOH A 117 617 193 HOH HOH . C 3 HOH A 118 618 6 HOH HOH . C 3 HOH A 119 619 69 HOH HOH . C 3 HOH A 120 620 36 HOH HOH . C 3 HOH A 121 621 31 HOH HOH . C 3 HOH A 122 622 65 HOH HOH . C 3 HOH A 123 623 47 HOH HOH . C 3 HOH A 124 624 55 HOH HOH . C 3 HOH A 125 625 59 HOH HOH . C 3 HOH A 126 626 51 HOH HOH . C 3 HOH A 127 627 129 HOH HOH . C 3 HOH A 128 628 192 HOH HOH . C 3 HOH A 129 629 198 HOH HOH . C 3 HOH A 130 630 14 HOH HOH . C 3 HOH A 131 631 117 HOH HOH . C 3 HOH A 132 632 185 HOH HOH . C 3 HOH A 133 633 26 HOH HOH . C 3 HOH A 134 634 122 HOH HOH . C 3 HOH A 135 635 161 HOH HOH . C 3 HOH A 136 636 97 HOH HOH . C 3 HOH A 137 637 156 HOH HOH . C 3 HOH A 138 638 42 HOH HOH . C 3 HOH A 139 639 57 HOH HOH . C 3 HOH A 140 640 104 HOH HOH . C 3 HOH A 141 641 108 HOH HOH . C 3 HOH A 142 642 81 HOH HOH . C 3 HOH A 143 643 67 HOH HOH . C 3 HOH A 144 644 75 HOH HOH . C 3 HOH A 145 645 197 HOH HOH . C 3 HOH A 146 646 146 HOH HOH . C 3 HOH A 147 647 183 HOH HOH . C 3 HOH A 148 648 191 HOH HOH . C 3 HOH A 149 649 142 HOH HOH . C 3 HOH A 150 650 25 HOH HOH . C 3 HOH A 151 651 112 HOH HOH . C 3 HOH A 152 652 79 HOH HOH . C 3 HOH A 153 653 168 HOH HOH . C 3 HOH A 154 654 187 HOH HOH . C 3 HOH A 155 655 182 HOH HOH . C 3 HOH A 156 656 189 HOH HOH . C 3 HOH A 157 657 115 HOH HOH . C 3 HOH A 158 658 190 HOH HOH . C 3 HOH A 159 659 133 HOH HOH . C 3 HOH A 160 660 111 HOH HOH . C 3 HOH A 161 661 138 HOH HOH . C 3 HOH A 162 662 144 HOH HOH . C 3 HOH A 163 663 174 HOH HOH . C 3 HOH A 164 664 139 HOH HOH . C 3 HOH A 165 665 113 HOH HOH . C 3 HOH A 166 666 147 HOH HOH . C 3 HOH A 167 667 186 HOH HOH . C 3 HOH A 168 668 116 HOH HOH . C 3 HOH A 169 669 120 HOH HOH . C 3 HOH A 170 670 119 HOH HOH . C 3 HOH A 171 671 130 HOH HOH . C 3 HOH A 172 672 171 HOH HOH . C 3 HOH A 173 673 135 HOH HOH . C 3 HOH A 174 674 71 HOH HOH . C 3 HOH A 175 675 157 HOH HOH . C 3 HOH A 176 676 140 HOH HOH . C 3 HOH A 177 677 100 HOH HOH . C 3 HOH A 178 678 136 HOH HOH . C 3 HOH A 179 679 90 HOH HOH . C 3 HOH A 180 680 95 HOH HOH . C 3 HOH A 181 681 165 HOH HOH . C 3 HOH A 182 682 49 HOH HOH . C 3 HOH A 183 683 166 HOH HOH . C 3 HOH A 184 684 163 HOH HOH . C 3 HOH A 185 685 159 HOH HOH . C 3 HOH A 186 686 199 HOH HOH . C 3 HOH A 187 687 195 HOH HOH . C 3 HOH A 188 688 102 HOH HOH . C 3 HOH A 189 689 76 HOH HOH . C 3 HOH A 190 690 88 HOH HOH . C 3 HOH A 191 691 131 HOH HOH . C 3 HOH A 192 692 179 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C11 7YY . . . B 2 -22.135 -11.244 2.697 1 25.81 ? C11 7YY 401 A 1 HETATM 2 C C13 7YY . . . B 2 -23.639 -9.531 1.857 1 29.89 ? C13 7YY 401 A 1 HETATM 3 C C14 7YY . . . B 2 -25.009 -9.446 1.888 1 33.68 ? C14 7YY 401 A 1 HETATM 4 C C15 7YY . . . B 2 -25.579 -8.192 2.152 1 31.67 ? C15 7YY 401 A 1 HETATM 5 C C01 7YY . . . B 2 -22.644 -16.36 7.563 1 28.5 ? C01 7YY 401 A 1 HETATM 6 N N02 7YY . . . B 2 -21.502 -15.48 7.363 1 26.82 ? N02 7YY 401 A 1 HETATM 7 C C03 7YY . . . B 2 -20.324 -15.618 7.938 1 28.25 ? C03 7YY 401 A 1 HETATM 8 N N04 7YY . . . B 2 -19.537 -14.633 7.509 1 26.17 ? N04 7YY 401 A 1 HETATM 9 C C05 7YY . . . B 2 -20.262 -13.903 6.657 1 27.99 ? C05 7YY 401 A 1 HETATM 10 C C06 7YY . . . B 2 -19.739 -12.684 5.947 1 25.19 ? C06 7YY 401 A 1 HETATM 11 N N07 7YY . . . B 2 -20.562 -12.237 4.851 1 27.92 ? N07 7YY 401 A 1 HETATM 12 C C08 7YY . . . B 2 -21.323 -11.017 5.034 1 28.35 ? C08 7YY 401 A 1 HETATM 13 O O09 7YY . . . B 2 -21.298 -10.447 6.076 1 29.34 ? O09 7YY 401 A 1 HETATM 14 N N10 7YY . . . B 2 -22.12 -10.523 3.941 1 28.32 ? N10 7YY 401 A 1 HETATM 15 N N12 7YY . . . B 2 -22.932 -10.758 1.597 1 28.18 ? N12 7YY 401 A 1 HETATM 16 C C16 7YY . . . B 2 -26.904 -7.816 2.247 1 35.61 ? C16 7YY 401 A 1 HETATM 17 N N17 7YY . . . B 2 -26.939 -6.516 2.515 1 38.89 ? N17 7YY 401 A 1 HETATM 18 C C18 7YY . . . B 2 -27.973 -5.528 2.732 1 41.96 ? C18 7YY 401 A 1 HETATM 19 N N19 7YY . . . B 2 -25.631 -6.044 2.592 1 37.77 ? N19 7YY 401 A 1 HETATM 20 C C20 7YY . . . B 2 -24.799 -7.086 2.366 1 33.47 ? C20 7YY 401 A 1 HETATM 21 C C21 7YY . . . B 2 -23.387 -7.187 2.323 1 28.6 ? C21 7YY 401 A 1 HETATM 22 C C22 7YY . . . B 2 -22.842 -8.432 2.061 1 25.76 ? C22 7YY 401 A 1 HETATM 23 CL CL2 7YY . . . B 2 -21.08 -8.146 2.102 1 28.05 ? CL2 7YY 401 A 1 HETATM 24 N N24 7YY . . . B 2 -21.38 -12.449 2.514 1 26.45 ? N24 7YY 401 A 1 HETATM 25 C C25 7YY . . . B 2 -21.407 -13.149 1.243 1 25.74 ? C25 7YY 401 A 1 HETATM 26 C C26 7YY . . . B 2 -20.221 -12.683 0.391 1 25.24 ? C26 7YY 401 A 1 HETATM 27 C C27 7YY . . . B 2 -19.969 -13.363 -0.775 1 31.52 ? C27 7YY 401 A 1 HETATM 28 F F28 7YY . . . B 2 -20.783 -14.399 -1.099 1 33.25 ? F28 7YY 401 A 1 HETATM 29 C C29 7YY . . . B 2 -18.915 -12.998 -1.596 1 32.4 ? C29 7YY 401 A 1 HETATM 30 C C30 7YY . . . B 2 -18.115 -11.937 -1.219 1 32.08 ? C30 7YY 401 A 1 HETATM 31 F F31 7YY . . . B 2 -17.074 -11.548 -2 1 35.93 ? F31 7YY 401 A 1 HETATM 32 C C32 7YY . . . B 2 -18.356 -11.247 -0.05 1 26.88 ? C32 7YY 401 A 1 HETATM 33 F F33 7YY . . . B 2 -17.545 -10.204 0.292 1 28.43 ? F33 7YY 401 A 1 HETATM 34 C C34 7YY . . . B 2 -19.417 -11.618 0.766 1 26.34 ? C34 7YY 401 A 1 HETATM 35 C C35 7YY . . . B 2 -20.58 -12.954 3.596 1 25.29 ? C35 7YY 401 A 1 HETATM 36 O O36 7YY . . . B 2 -19.977 -13.953 3.433 1 27.25 ? O36 7YY 401 A 1 HETATM 37 N N37 7YY . . . B 2 -21.468 -14.405 6.551 1 28.24 ? N37 7YY 401 A 1 # _model_server_stats.io_time_ms 27 _model_server_stats.parse_time_ms 29 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 37 #