data_8IOK # _model_server_result.job_id 7w9eyXvEugQdWdeegslCOQ _model_server_result.datetime_utc '2024-10-11 00:33:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8iok # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":502}' # _entry.id 8IOK # _exptl.entry_id 8IOK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 400.359 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 6-[diethylcarbamoyl(methyl)amino]-N-(1-methyl-1,2,3,4-tetrazol-5-yl)-2-(trifluoromethyl)pyridine-3-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.53 _cell.angle_gamma 90 _cell.entry_id 8IOK _cell.length_a 77.67 _cell.length_b 84.251 _cell.length_c 64.191 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8IOK _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_557 -x,y,-z+2 -1 0 0 0 1 0 0 0 -1 -23.461853 0 126.219964 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 373 A CYS 401 1_555 A SG CYS 388 A CYS 416 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.929 ? metalc ? metalc1 A NE2 HIS 198 A HIS 226 1_555 B CO CO . A CO 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.288 ? metalc ? metalc2 A NE2 HIS 280 A HIS 308 1_555 B CO CO . A CO 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.366 ? metalc ? metalc3 A OE1 GLU 366 A GLU 394 1_555 B CO CO . A CO 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? metalc ? metalc4 B CO CO . A CO 501 1_555 C N20 SYI . A SYI 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? metalc ? metalc5 B CO CO . A CO 501 1_555 C O08 SYI . A SYI 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.206 ? # _chem_comp.formula 'C15 H19 F3 N8 O2' _chem_comp.formula_weight 400.359 _chem_comp.id SYI _chem_comp.mon_nstd_flag . _chem_comp.name 6-[diethylcarbamoyl(methyl)amino]-N-(1-methyl-1,2,3,4-tetrazol-5-yl)-2-(trifluoromethyl)pyridine-3-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N21 N20 SYI sing 290 n y N21 N22 SYI doub 291 n y N20 C19 SYI doub 292 n y F26 C25 SYI sing 293 n n O08 C7 SYI doub 294 n n N22 N23 SYI sing 295 n y C19 N23 SYI sing 296 n y C19 N9 SYI sing 297 n n F28 C25 SYI sing 298 n n N23 C24 SYI sing 299 n n C7 N9 SYI sing 300 n n C7 C1 SYI sing 301 n n C25 F27 SYI sing 302 n n C25 C6 SYI sing 303 n n C17 C16 SYI sing 304 n n C16 N14 SYI sing 305 n n C1 C6 SYI doub 306 n y C1 C2 SYI sing 307 n y C6 N5 SYI sing 308 n y C2 C3 SYI doub 309 n y N5 C4 SYI doub 310 n y C18 C15 SYI sing 311 n n N14 C15 SYI sing 312 n n N14 C12 SYI sing 313 n n C4 C3 SYI sing 314 n y C4 N10 SYI sing 315 n n C12 N10 SYI sing 316 n n C12 O13 SYI doub 317 n n N10 C11 SYI sing 318 n n C15 H1 SYI sing 319 n n C15 H2 SYI sing 320 n n C17 H3 SYI sing 321 n n C17 H4 SYI sing 322 n n C17 H5 SYI sing 323 n n C24 H6 SYI sing 324 n n C24 H7 SYI sing 325 n n C24 H8 SYI sing 326 n n C2 H9 SYI sing 327 n n C3 H10 SYI sing 328 n n C11 H11 SYI sing 329 n n C11 H12 SYI sing 330 n n C11 H13 SYI sing 331 n n C16 H14 SYI sing 332 n n C16 H15 SYI sing 333 n n C18 H16 SYI sing 334 n n C18 H17 SYI sing 335 n n C18 H18 SYI sing 336 n n N9 H19 SYI sing 337 n n # _atom_sites.entry_id 8IOK _atom_sites.fract_transf_matrix[1][1] 0.012875 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002393 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011869 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015845 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CO A 1 501 1 CO CO . C 3 SYI A 1 502 501 SYI LIG . D 4 HOH A 1 601 3 HOH HOH . D 4 HOH A 2 602 2 HOH HOH . D 4 HOH A 3 603 1 HOH HOH . D 4 HOH A 4 604 5 HOH HOH . D 4 HOH A 5 605 4 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C15 SYI . . . C 3 -5.824 -1.727 87.029 1 97.32 ? C15 SYI 502 A 1 HETATM 2 C C17 SYI . . . C 3 -4.756 -3.306 84.979 1 88.99 ? C17 SYI 502 A 1 HETATM 3 C C24 SYI . . . C 3 5.063 -6.365 85.917 1 69.4 ? C24 SYI 502 A 1 HETATM 4 C C1 SYI . . . C 3 1.089 -2.78 85.682 1 78.25 ? C1 SYI 502 A 1 HETATM 5 C C2 SYI . . . C 3 1.253 -1.619 86.606 1 82.79 ? C2 SYI 502 A 1 HETATM 6 C C3 SYI . . . C 3 0.142 -1.254 87.55 1 88.18 ? C3 SYI 502 A 1 HETATM 7 C C4 SYI . . . C 3 -1.143 -2.083 87.545 1 90.36 ? C4 SYI 502 A 1 HETATM 8 C C6 SYI . . . C 3 -0.177 -3.614 85.722 1 82.5 ? C6 SYI 502 A 1 HETATM 9 C C7 SYI . . . C 3 2.246 -3.141 84.737 1 72.08 ? C7 SYI 502 A 1 HETATM 10 C C11 SYI . . . C 3 -1.8 -1.471 89.836 1 95.82 ? C11 SYI 502 A 1 HETATM 11 C C12 SYI . . . C 3 -3.631 -1.678 88.198 1 96.82 ? C12 SYI 502 A 1 HETATM 12 C C16 SYI . . . C 3 -3.848 -2.253 85.643 1 89.66 ? C16 SYI 502 A 1 HETATM 13 C C18 SYI . . . C 3 -6.18 -0.263 86.777 1 97.8 ? C18 SYI 502 A 1 HETATM 14 C C19 SYI . . . C 3 4.266 -4.587 84.358 1 68.6 ? C19 SYI 502 A 1 HETATM 15 C C25 SYI . . . C 3 -0.397 -4.796 84.785 1 80.83 ? C25 SYI 502 A 1 HETATM 16 F F26 SYI . . . C 3 -0.682 -4.198 83.588 1 80.2 ? F26 SYI 502 A 1 HETATM 17 F F27 SYI . . . C 3 -1.484 -5.537 85.196 1 88.67 ? F27 SYI 502 A 1 HETATM 18 F F28 SYI . . . C 3 0.718 -5.592 84.69 1 83.38 ? F28 SYI 502 A 1 HETATM 19 N N5 SYI . . . C 3 -1.266 -3.253 86.648 1 90.59 ? N5 SYI 502 A 1 HETATM 20 N N9 SYI . . . C 3 3.138 -4.199 85.177 1 72.79 ? N9 SYI 502 A 1 HETATM 21 N N10 SYI . . . C 3 -2.215 -1.749 88.473 1 93.33 ? N10 SYI 502 A 1 HETATM 22 N N14 SYI . . . C 3 -4.387 -1.893 86.95 1 96.76 ? N14 SYI 502 A 1 HETATM 23 N N20 SYI . . . C 3 4.635 -4.06 83.171 1 64.37 ? N20 SYI 502 A 1 HETATM 24 N N21 SYI . . . C 3 5.745 -4.716 82.763 1 67.34 ? N21 SYI 502 A 1 HETATM 25 N N22 SYI . . . C 3 6.063 -5.638 83.707 1 69.89 ? N22 SYI 502 A 1 HETATM 26 N N23 SYI . . . C 3 5.138 -5.557 84.698 1 71.42 ? N23 SYI 502 A 1 HETATM 27 O O08 SYI . . . C 3 2.43 -2.592 83.7 1 68.47 ? O08 SYI 502 A 1 HETATM 28 O O13 SYI . . . C 3 -4.289 -1.384 89.145 1 102.24 ? O13 SYI 502 A 1 # _model_server_stats.io_time_ms 68 _model_server_stats.parse_time_ms 101 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 28 #