data_8IPR
#
_model_server_result.job_id            XasA0K6M5cRFkBxYzynWBA 
_model_server_result.datetime_utc      '2025-02-05 15:05:13' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8ipr 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"L","auth_seq_id":602}' 
#
_entry.id    8IPR 
#
_exptl.entry_id    8IPR 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              507.181 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "ADENOSINE-5'-TRIPHOSPHATE" 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8IPR 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8IPR 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? dimeric 2 author_defined_assembly 1 
? dimeric 2 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,G,H 1 1 
C,D,I,J,K,L 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 F N N 
? 4 H N N 
? 4 J N N 
? 4 L N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OG1 THR 348 A THR 351 1_555 E MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? 
metalc ? metalc2 E MG MG . A MG 601 1_555 F O3G ATP . A ATP 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.659 ? 
metalc ? metalc3 E MG MG . A MG 601 1_555 F O2B ATP . A ATP 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.612 ? 
metalc ? metalc4 B OG SER 343 C SER 337 1_555 G MG MG . C MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.978 ? 
metalc ? metalc5 G MG MG . C MG 601 1_555 H O2B ATP . C ATP 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.186 ? 
metalc ? metalc6 G MG MG . C MG 601 1_555 H O1G ATP . C ATP 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? 
metalc ? metalc7 C OG1 THR 348 D THR 351 1_555 I MG MG . D MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? 
metalc ? metalc8 I MG MG . D MG 601 1_555 J O3G ATP . D ATP 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.66 ? 
metalc ? metalc9 I MG MG . D MG 601 1_555 J O2B ATP . D ATP 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.62 ? 
metalc ? metalc10 D OG SER 343 E SER 337 1_555 K MG MG . E MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.978 ? 
metalc ? metalc11 K MG MG . E MG 601 1_555 L O2B ATP . E ATP 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.189 ? 
metalc ? metalc12 K MG MG . E MG 601 1_555 L O1G ATP . E ATP 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? 
#
_chem_comp.formula           'C10 H16 N5 O13 P3' 
_chem_comp.formula_weight    507.181 
_chem_comp.id                ATP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "ADENOSINE-5'-TRIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G ATP doub 70 n n 
PG O2G ATP sing 71 n n 
PG O3G ATP sing 72 n n 
PG O3B ATP sing 73 n n 
O2G HOG2 ATP sing 74 n n 
O3G HOG3 ATP sing 75 n n 
PB O1B ATP doub 76 n n 
PB O2B ATP sing 77 n n 
PB O3B ATP sing 78 n n 
PB O3A ATP sing 79 n n 
O2B HOB2 ATP sing 80 n n 
PA O1A ATP doub 81 n n 
PA O2A ATP sing 82 n n 
PA O3A ATP sing 83 n n 
PA O5' ATP sing 84 n n 
O2A HOA2 ATP sing 85 n n 
O5' C5' ATP sing 86 n n 
C5' C4' ATP sing 87 n n 
C5' "H5'1" ATP sing 88 n n 
C5' "H5'2" ATP sing 89 n n 
C4' O4' ATP sing 90 n n 
C4' C3' ATP sing 91 n n 
C4' H4' ATP sing 92 n n 
O4' C1' ATP sing 93 n n 
C3' O3' ATP sing 94 n n 
C3' C2' ATP sing 95 n n 
C3' H3' ATP sing 96 n n 
O3' HO3' ATP sing 97 n n 
C2' O2' ATP sing 98 n n 
C2' C1' ATP sing 99 n n 
C2' H2' ATP sing 100 n n 
O2' HO2' ATP sing 101 n n 
C1' N9 ATP sing 102 n n 
C1' H1' ATP sing 103 n n 
N9 C8 ATP sing 104 n y 
N9 C4 ATP sing 105 n y 
C8 N7 ATP doub 106 n y 
C8 H8 ATP sing 107 n n 
N7 C5 ATP sing 108 n y 
C5 C6 ATP sing 109 n y 
C5 C4 ATP doub 110 n y 
C6 N6 ATP sing 111 n n 
C6 N1 ATP doub 112 n y 
N6 HN61 ATP sing 113 n n 
N6 HN62 ATP sing 114 n n 
N1 C2 ATP sing 115 n y 
C2 N3 ATP doub 116 n y 
C2 H2 ATP sing 117 n n 
N3 C4 ATP sing 118 n y 
#
_atom_sites.entry_id                     8IPR 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 MG A 1 601 602 MG MG . 
F 4 ATP A 1 602 603 ATP ATP . 
G 3 MG C 1 601 602 MG MG . 
H 4 ATP C 1 602 603 ATP ATP . 
I 3 MG D 1 601 602 MG MG . 
J 4 ATP D 1 602 603 ATP ATP . 
K 3 MG E 1 601 602 MG MG . 
L 4 ATP E 1 602 603 ATP ATP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG ATP . . . L 4 161.288 139.244 206.98 1 20 ? PG ATP 602 E 1 
HETATM 2 O O1G ATP . . . L 4 161.279 137.991 206.221 1 20 ? O1G ATP 602 E 1 
HETATM 3 O O2G ATP . . . L 4 160.442 140.279 206.385 1 20 ? O2G ATP 602 E 1 
HETATM 4 O O3G ATP . . . L 4 160.991 139.028 208.394 1 20 ? O3G ATP 602 E 1 
HETATM 5 P PB ATP . . . L 4 164.112 139.242 206.173 1 20 ? PB ATP 602 E 1 
HETATM 6 O O1B ATP . . . L 4 165.071 139.213 207.264 1 20 ? O1B ATP 602 E 1 
HETATM 7 O O2B ATP . . . L 4 163.781 137.996 205.469 1 20 ? O2B ATP 602 E 1 
HETATM 8 O O3B ATP . . . L 4 162.761 139.822 206.775 1 20 ? O3B ATP 602 E 1 
HETATM 9 P PA ATP . . . L 4 164.836 140.295 203.507 1 20 ? PA ATP 602 E 1 
HETATM 10 O O1A ATP . . . L 4 163.713 139.662 202.802 1 20 ? O1A ATP 602 E 1 
HETATM 11 O O2A ATP . . . L 4 166.166 139.759 203.179 1 20 ? O2A ATP 602 E 1 
HETATM 12 O O3A ATP . . . L 4 164.595 140.285 205.078 1 20 ? O3A ATP 602 E 1 
HETATM 13 O O5' ATP . . . L 4 164.81 141.835 203.177 1 20 ? O5' ATP 602 E 1 
HETATM 14 C C5' ATP . . . L 4 166.001 142.626 203.283 1 20 ? C5' ATP 602 E 1 
HETATM 15 C C4' ATP . . . L 4 165.721 143.986 202.709 1 20 ? C4' ATP 602 E 1 
HETATM 16 O O4' ATP . . . L 4 165.778 143.914 201.266 1 20 ? O4' ATP 602 E 1 
HETATM 17 C C3' ATP . . . L 4 164.341 144.581 203.01 1 20 ? C3' ATP 602 E 1 
HETATM 18 O O3' ATP . . . L 4 164.499 145.908 203.478 1 20 ? O3' ATP 602 E 1 
HETATM 19 C C2' ATP . . . L 4 163.657 144.58 201.647 1 20 ? C2' ATP 602 E 1 
HETATM 20 O O2' ATP . . . L 4 162.675 145.581 201.562 1 20 ? O2' ATP 602 E 1 
HETATM 21 C C1' ATP . . . L 4 164.875 144.872 200.793 1 20 ? C1' ATP 602 E 1 
HETATM 22 N N9 ATP . . . L 4 164.765 144.77 199.343 1 20 ? N9 ATP 602 E 1 
HETATM 23 C C8 ATP . . . L 4 164.902 145.799 198.448 1 20 ? C8 ATP 602 E 1 
HETATM 24 N N7 ATP . . . L 4 164.767 145.418 197.203 1 20 ? N7 ATP 602 E 1 
HETATM 25 C C5 ATP . . . L 4 164.545 144.057 197.294 1 20 ? C5 ATP 602 E 1 
HETATM 26 C C6 ATP . . . L 4 164.327 143.08 196.317 1 20 ? C6 ATP 602 E 1 
HETATM 27 N N6 ATP . . . L 4 164.294 143.334 195.014 1 20 ? N6 ATP 602 E 1 
HETATM 28 N N1 ATP . . . L 4 164.136 141.814 196.751 1 20 ? N1 ATP 602 E 1 
HETATM 29 C C2 ATP . . . L 4 164.169 141.573 198.069 1 20 ? C2 ATP 602 E 1 
HETATM 30 N N3 ATP . . . L 4 164.368 142.412 199.075 1 20 ? N3 ATP 602 E 1 
HETATM 31 C C4 ATP . . . L 4 164.551 143.648 198.608 1 20 ? C4 ATP 602 E 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    25 
_model_server_stats.query_time_ms           313 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           31 
#