data_8IQR # _model_server_result.job_id 5Yccg4Cs69Y-1TxTSKSCag _model_server_result.datetime_utc '2025-08-03 08:35:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8iqr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":201}' # _entry.id 8IQR # _exptl.entry_id 8IQR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 412.516 _entity.id 3 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 2,5,8,11,14,17,20,23,26-nonaoxaoctacosane _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 117.01 _cell.angle_gamma 90 _cell.entry_id 8IQR _cell.length_a 69.1 _cell.length_b 82.78 _cell.length_c 71.17 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8IQR _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,G,H 1 1 C,D,F,I,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 38 L CYS 24 1_555 A SG CYS 108 L CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf2 B SG CYS 37 H CYS 23 1_555 B SG CYS 111 H CYS 97 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf3 C SG CYS 38 l CYS 24 1_555 C SG CYS 108 l CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf4 D SG CYS 37 h CYS 23 1_555 D SG CYS 111 h CYS 97 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? # _chem_comp.formula 'C19 H40 O9' _chem_comp.formula_weight 412.516 _chem_comp.id HZA _chem_comp.mon_nstd_flag . _chem_comp.name 2,5,8,11,14,17,20,23,26-nonaoxaoctacosane _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C28 O27 HZA sing 152 n n O27 C26 HZA sing 153 n n C26 C25 HZA sing 154 n n C1 C2 HZA sing 155 n n C25 O24 HZA sing 156 n n C19 O18 HZA sing 157 n n C19 C20 HZA sing 158 n n O3 C2 HZA sing 159 n n O3 C4 HZA sing 160 n n O6 C5 HZA sing 161 n n O6 C7 HZA sing 162 n n C22 O21 HZA sing 163 n n C22 C23 HZA sing 164 n n O18 C17 HZA sing 165 n n C5 C4 HZA sing 166 n n O24 C23 HZA sing 167 n n C20 O21 HZA sing 168 n n C8 C7 HZA sing 169 n n C8 O9 HZA sing 170 n n C17 C16 HZA sing 171 n n O9 C10 HZA sing 172 n n C16 O15 HZA sing 173 n n C10 C11 HZA sing 174 n n O12 C11 HZA sing 175 n n O12 C13 HZA sing 176 n n O15 C14 HZA sing 177 n n C13 C14 HZA sing 178 n n C1 H1 HZA sing 179 n n C1 H2 HZA sing 180 n n C1 H3 HZA sing 181 n n C2 H4 HZA sing 182 n n C2 H5 HZA sing 183 n n C4 H6 HZA sing 184 n n C4 H7 HZA sing 185 n n C5 H8 HZA sing 186 n n C5 H9 HZA sing 187 n n C7 H10 HZA sing 188 n n C7 H11 HZA sing 189 n n C8 H12 HZA sing 190 n n C8 H13 HZA sing 191 n n C10 H14 HZA sing 192 n n C10 H15 HZA sing 193 n n C11 H16 HZA sing 194 n n C11 H17 HZA sing 195 n n C13 H18 HZA sing 196 n n C13 H19 HZA sing 197 n n C14 H20 HZA sing 198 n n C14 H21 HZA sing 199 n n C16 H22 HZA sing 200 n n C16 H23 HZA sing 201 n n C17 H24 HZA sing 202 n n C17 H25 HZA sing 203 n n C19 H26 HZA sing 204 n n C19 H27 HZA sing 205 n n C20 H28 HZA sing 206 n n C20 H29 HZA sing 207 n n C22 H30 HZA sing 208 n n C22 H31 HZA sing 209 n n C23 H32 HZA sing 210 n n C23 H33 HZA sing 211 n n C25 H34 HZA sing 212 n n C25 H35 HZA sing 213 n n C26 H36 HZA sing 214 n n C26 H37 HZA sing 215 n n C28 H38 HZA sing 216 n n C28 H39 HZA sing 217 n n C28 H40 HZA sing 218 n n # _atom_sites.entry_id 8IQR _atom_sites.fract_transf_matrix[1][1] 0.014472 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007377 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01208 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015771 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 HZA H 1 201 201 HZA 1P2 . F 3 HZA h 1 201 201 HZA 1P2 . G 4 HOH L 1 201 113 HOH HOH . G 4 HOH L 2 202 2 HOH HOH . G 4 HOH L 3 203 32 HOH HOH . G 4 HOH L 4 204 41 HOH HOH . G 4 HOH L 5 205 23 HOH HOH . G 4 HOH L 6 206 90 HOH HOH . G 4 HOH L 7 207 16 HOH HOH . G 4 HOH L 8 208 134 HOH HOH . G 4 HOH L 9 209 35 HOH HOH . G 4 HOH L 10 210 12 HOH HOH . G 4 HOH L 11 211 108 HOH HOH . G 4 HOH L 12 212 60 HOH HOH . G 4 HOH L 13 213 26 HOH HOH . G 4 HOH L 14 214 119 HOH HOH . G 4 HOH L 15 215 47 HOH HOH . G 4 HOH L 16 216 68 HOH HOH . G 4 HOH L 17 217 73 HOH HOH . G 4 HOH L 18 218 65 HOH HOH . G 4 HOH L 19 219 61 HOH HOH . G 4 HOH L 20 220 109 HOH HOH . G 4 HOH L 21 221 50 HOH HOH . G 4 HOH L 22 222 22 HOH HOH . G 4 HOH L 23 223 13 HOH HOH . G 4 HOH L 24 224 101 HOH HOH . G 4 HOH L 25 225 57 HOH HOH . G 4 HOH L 26 226 98 HOH HOH . G 4 HOH L 27 227 77 HOH HOH . G 4 HOH L 28 228 28 HOH HOH . G 4 HOH L 29 229 76 HOH HOH . G 4 HOH L 30 230 81 HOH HOH . G 4 HOH L 31 231 1 HOH HOH . G 4 HOH L 32 232 71 HOH HOH . G 4 HOH L 33 233 91 HOH HOH . G 4 HOH L 34 234 132 HOH HOH . G 4 HOH L 35 235 75 HOH HOH . G 4 HOH L 36 236 25 HOH HOH . G 4 HOH L 37 237 116 HOH HOH . G 4 HOH L 38 238 67 HOH HOH . G 4 HOH L 39 239 104 HOH HOH . H 4 HOH H 1 301 106 HOH HOH . H 4 HOH H 2 302 5 HOH HOH . H 4 HOH H 3 303 107 HOH HOH . H 4 HOH H 4 304 78 HOH HOH . H 4 HOH H 5 305 44 HOH HOH . H 4 HOH H 6 306 31 HOH HOH . H 4 HOH H 7 307 19 HOH HOH . H 4 HOH H 8 308 7 HOH HOH . H 4 HOH H 9 309 3 HOH HOH . H 4 HOH H 10 310 62 HOH HOH . H 4 HOH H 11 311 64 HOH HOH . H 4 HOH H 12 312 20 HOH HOH . H 4 HOH H 13 313 49 HOH HOH . H 4 HOH H 14 314 127 HOH HOH . H 4 HOH H 15 315 79 HOH HOH . H 4 HOH H 16 316 51 HOH HOH . H 4 HOH H 17 317 131 HOH HOH . H 4 HOH H 18 318 59 HOH HOH . H 4 HOH H 19 319 82 HOH HOH . H 4 HOH H 20 320 46 HOH HOH . H 4 HOH H 21 321 58 HOH HOH . H 4 HOH H 22 322 126 HOH HOH . H 4 HOH H 23 323 69 HOH HOH . H 4 HOH H 24 324 30 HOH HOH . H 4 HOH H 25 325 100 HOH HOH . H 4 HOH H 26 326 88 HOH HOH . H 4 HOH H 27 327 118 HOH HOH . H 4 HOH H 28 328 80 HOH HOH . H 4 HOH H 29 329 94 HOH HOH . H 4 HOH H 30 330 66 HOH HOH . H 4 HOH H 31 331 133 HOH HOH . H 4 HOH H 32 332 92 HOH HOH . H 4 HOH H 33 333 125 HOH HOH . H 4 HOH H 34 334 120 HOH HOH . I 4 HOH l 1 201 95 HOH HOH . I 4 HOH l 2 202 112 HOH HOH . I 4 HOH l 3 203 14 HOH HOH . I 4 HOH l 4 204 48 HOH HOH . I 4 HOH l 5 205 102 HOH HOH . I 4 HOH l 6 206 27 HOH HOH . I 4 HOH l 7 207 8 HOH HOH . I 4 HOH l 8 208 36 HOH HOH . I 4 HOH l 9 209 10 HOH HOH . I 4 HOH l 10 210 6 HOH HOH . I 4 HOH l 11 211 54 HOH HOH . I 4 HOH l 12 212 129 HOH HOH . I 4 HOH l 13 213 17 HOH HOH . I 4 HOH l 14 214 11 HOH HOH . I 4 HOH l 15 215 55 HOH HOH . I 4 HOH l 16 216 15 HOH HOH . I 4 HOH l 17 217 21 HOH HOH . I 4 HOH l 18 218 130 HOH HOH . I 4 HOH l 19 219 37 HOH HOH . I 4 HOH l 20 220 45 HOH HOH . I 4 HOH l 21 221 128 HOH HOH . I 4 HOH l 22 222 33 HOH HOH . I 4 HOH l 23 223 52 HOH HOH . I 4 HOH l 24 224 72 HOH HOH . I 4 HOH l 25 225 114 HOH HOH . I 4 HOH l 26 226 123 HOH HOH . I 4 HOH l 27 227 53 HOH HOH . I 4 HOH l 28 228 136 HOH HOH . I 4 HOH l 29 229 84 HOH HOH . J 4 HOH h 1 301 9 HOH HOH . J 4 HOH h 2 302 93 HOH HOH . J 4 HOH h 3 303 63 HOH HOH . J 4 HOH h 4 304 135 HOH HOH . J 4 HOH h 5 305 18 HOH HOH . J 4 HOH h 6 306 74 HOH HOH . J 4 HOH h 7 307 122 HOH HOH . J 4 HOH h 8 308 105 HOH HOH . J 4 HOH h 9 309 29 HOH HOH . J 4 HOH h 10 310 83 HOH HOH . J 4 HOH h 11 311 121 HOH HOH . J 4 HOH h 12 312 4 HOH HOH . J 4 HOH h 13 313 103 HOH HOH . J 4 HOH h 14 314 70 HOH HOH . J 4 HOH h 15 315 115 HOH HOH . J 4 HOH h 16 316 38 HOH HOH . J 4 HOH h 17 317 43 HOH HOH . J 4 HOH h 18 318 39 HOH HOH . J 4 HOH h 19 319 99 HOH HOH . J 4 HOH h 20 320 86 HOH HOH . J 4 HOH h 21 321 56 HOH HOH . J 4 HOH h 22 322 89 HOH HOH . J 4 HOH h 23 323 34 HOH HOH . J 4 HOH h 24 324 117 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 HZA . . . E 3 -43.974 3.568 -37.893 1 64.85 ? C2 HZA 201 H 1 HETATM 2 C C4 HZA . . . E 3 -44.006 5.593 -36.711 1 61.56 ? C4 HZA 201 H 1 HETATM 3 O O3 HZA . . . E 3 -43.417 4.334 -36.862 1 62.97 ? O3 HZA 201 H 1 HETATM 4 C C5 HZA . . . E 3 -44.283 5.856 -35.232 1 62.13 ? C5 HZA 201 H 1 HETATM 5 O O6 HZA . . . E 3 -43.217 6.567 -34.668 1 59.4 ? O6 HZA 201 H 1 HETATM 6 C C7 HZA . . . E 3 -43.049 7.855 -35.191 1 50.11 ? C7 HZA 201 H 1 HETATM 7 C C8 HZA . . . E 3 -41.726 8.434 -34.695 1 54.75 ? C8 HZA 201 H 1 HETATM 8 O O9 HZA . . . E 3 -41.051 9.036 -35.762 1 56.8 ? O9 HZA 201 H 1 HETATM 9 C C10 HZA . . . E 3 -39.858 9.668 -35.393 1 46.68 ? C10 HZA 201 H 1 HETATM 10 C C11 HZA . . . E 3 -38.959 9.819 -36.618 1 43.05 ? C11 HZA 201 H 1 HETATM 11 O O12 HZA . . . E 3 -38.993 8.641 -37.372 1 52.39 ? O12 HZA 201 H 1 HETATM 12 C C13 HZA . . . E 3 -38.001 8.566 -38.355 1 45.17 ? C13 HZA 201 H 1 HETATM 13 C C14 HZA . . . E 3 -38.013 7.174 -38.983 1 51.11 ? C14 HZA 201 H 1 HETATM 14 O O15 HZA . . . E 3 -37.351 6.271 -38.143 1 52.75 ? O15 HZA 201 H 1 HETATM 15 C C16 HZA . . . E 3 -36.809 5.17 -38.816 1 48.75 ? C16 HZA 201 H 1 HETATM 16 C C17 HZA . . . E 3 -35.905 4.385 -37.869 1 46.51 ? C17 HZA 201 H 1 HETATM 17 O O18 HZA . . . E 3 -34.919 5.233 -37.354 1 41.28 ? O18 HZA 201 H 1 HETATM 18 C C19 HZA . . . E 3 -33.756 4.57 -36.948 1 38.91 ? C19 HZA 201 H 1 HETATM 19 C C20 HZA . . . E 3 -33.01 5.435 -35.935 1 42.1 ? C20 HZA 201 H 1 HETATM 20 O O21 HZA . . . E 3 -33.941 6.104 -35.134 1 51.95 ? O21 HZA 201 H 1 HETATM 21 C C22 HZA . . . E 3 -33.542 6.275 -33.804 1 47.02 ? C22 HZA 201 H 1 HETATM 22 C C23 HZA . . . E 3 -34.536 5.571 -32.883 1 47.22 ? C23 HZA 201 H 1 HETATM 23 O O24 HZA . . . E 3 -35.841 5.888 -33.274 1 48.12 ? O24 HZA 201 H 1 HETATM 24 C C25 HZA . . . E 3 -36.658 4.77 -33.475 1 55.29 ? C25 HZA 201 H 1 HETATM 25 C C26 HZA . . . E 3 -38.095 5.225 -33.721 1 61.14 ? C26 HZA 201 H 1 HETATM 26 O O27 HZA . . . E 3 -38.772 4.257 -34.469 1 59.6 ? O27 HZA 201 H 1 HETATM 27 C C28 HZA . . . E 3 -39.623 4.789 -35.445 1 58.25 ? C28 HZA 201 H 1 # _model_server_stats.io_time_ms 24 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 314 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 27 #