data_8IQU # _model_server_result.job_id 6Vnl5HRof_RYPJtbXsRYVg _model_server_result.datetime_utc '2024-10-19 01:40:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8iqu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 8IQU # _exptl.entry_id 8IQU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 606.691 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "5'-O-[(11-phenoxyundecanoyl)sulfamoyl]adenosine" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8IQU _cell.length_a 72.921 _cell.length_b 72.921 _cell.length_c 457.762 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8IQU _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C27 H38 N6 O8 S' _chem_comp.formula_weight 606.691 _chem_comp.id 649 _chem_comp.mon_nstd_flag . _chem_comp.name "5'-O-[(11-phenoxyundecanoyl)sulfamoyl]adenosine" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N4 C26 649 doub 1 n y N4 C27 649 sing 2 n y C26 N3 649 sing 3 n y N5 C27 649 sing 4 n n C27 C24 649 doub 5 n y N3 C25 649 doub 6 n y C25 C24 649 sing 7 n y C25 N1 649 sing 8 n y O7 C21 649 sing 9 n n C24 N2 649 sing 10 n y C21 C22 649 sing 11 n n C21 C20 649 sing 12 n n N1 C22 649 sing 13 n n N1 C23 649 sing 14 n y N2 C23 649 doub 15 n y C22 O6 649 sing 16 n n O8 C20 649 sing 17 n n C20 C19 649 sing 18 n n O6 C19 649 sing 19 n n C19 C18 649 sing 20 n n C18 O5 649 sing 21 n n C13 C12 649 sing 22 n n C13 C14 649 sing 23 n n C12 C11 649 sing 24 n n O5 S 649 sing 25 n n C15 C14 649 sing 26 n n C15 C16 649 sing 27 n n O2 C17 649 doub 28 n n C11 C10 649 sing 29 n n C10 C9 649 sing 30 n n C17 C16 649 sing 31 n n C17 N6 649 sing 32 n n S N6 649 sing 33 n n S O3 649 doub 34 n n S O4 649 doub 35 n n C9 C8 649 sing 36 n n C8 C7 649 sing 37 n n C7 O1 649 sing 38 n n O1 C5 649 sing 39 n n C5 C4 649 doub 40 n y C5 C6 649 sing 41 n y C4 C3 649 sing 42 n y C6 C1 649 doub 43 n y C3 C2 649 doub 44 n y C1 C2 649 sing 45 n y C15 H1 649 sing 46 n n C15 H2 649 sing 47 n n C16 H3 649 sing 48 n n C16 H4 649 sing 49 n n C13 H5 649 sing 50 n n C13 H6 649 sing 51 n n C11 H7 649 sing 52 n n C11 H8 649 sing 53 n n C10 H9 649 sing 54 n n C10 H10 649 sing 55 n n C2 H11 649 sing 56 n n C1 H12 649 sing 57 n n C6 H13 649 sing 58 n n C4 H14 649 sing 59 n n C3 H15 649 sing 60 n n C14 H16 649 sing 61 n n C14 H17 649 sing 62 n n C12 H18 649 sing 63 n n C12 H19 649 sing 64 n n C9 H20 649 sing 65 n n C9 H21 649 sing 66 n n C8 H22 649 sing 67 n n C8 H23 649 sing 68 n n C7 H24 649 sing 69 n n C7 H25 649 sing 70 n n N6 H26 649 sing 71 n n C18 H27 649 sing 72 n n C18 H28 649 sing 73 n n C19 H29 649 sing 74 n n C22 H30 649 sing 75 n n C21 H31 649 sing 76 n n O7 H32 649 sing 77 n n C20 H33 649 sing 78 n n O8 H34 649 sing 79 n n C26 H35 649 sing 80 n n N5 H36 649 sing 81 n n N5 H37 649 sing 82 n n C23 H38 649 sing 83 n n # _atom_sites.entry_id 8IQU _atom_sites.fract_transf_matrix[1][1] 0.013713 _atom_sites.fract_transf_matrix[1][2] 0.007917 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015835 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002185 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 649 A 1 601 601 649 AMS . C 3 HOH A 1 701 56 HOH HOH . C 3 HOH A 2 702 45 HOH HOH . C 3 HOH A 3 703 44 HOH HOH . C 3 HOH A 4 704 53 HOH HOH . C 3 HOH A 5 705 48 HOH HOH . C 3 HOH A 6 706 10 HOH HOH . C 3 HOH A 7 707 43 HOH HOH . C 3 HOH A 8 708 3 HOH HOH . C 3 HOH A 9 709 12 HOH HOH . C 3 HOH A 10 710 33 HOH HOH . C 3 HOH A 11 711 17 HOH HOH . C 3 HOH A 12 712 13 HOH HOH . C 3 HOH A 13 713 5 HOH HOH . C 3 HOH A 14 714 26 HOH HOH . C 3 HOH A 15 715 61 HOH HOH . C 3 HOH A 16 716 2 HOH HOH . C 3 HOH A 17 717 24 HOH HOH . C 3 HOH A 18 718 59 HOH HOH . C 3 HOH A 19 719 1 HOH HOH . C 3 HOH A 20 720 50 HOH HOH . C 3 HOH A 21 721 54 HOH HOH . C 3 HOH A 22 722 27 HOH HOH . C 3 HOH A 23 723 28 HOH HOH . C 3 HOH A 24 724 29 HOH HOH . C 3 HOH A 25 725 63 HOH HOH . C 3 HOH A 26 726 9 HOH HOH . C 3 HOH A 27 727 49 HOH HOH . C 3 HOH A 28 728 7 HOH HOH . C 3 HOH A 29 729 8 HOH HOH . C 3 HOH A 30 730 16 HOH HOH . C 3 HOH A 31 731 37 HOH HOH . C 3 HOH A 32 732 35 HOH HOH . C 3 HOH A 33 733 42 HOH HOH . C 3 HOH A 34 734 15 HOH HOH . C 3 HOH A 35 735 11 HOH HOH . C 3 HOH A 36 736 31 HOH HOH . C 3 HOH A 37 737 30 HOH HOH . C 3 HOH A 38 738 58 HOH HOH . C 3 HOH A 39 739 62 HOH HOH . C 3 HOH A 40 740 19 HOH HOH . C 3 HOH A 41 741 39 HOH HOH . C 3 HOH A 42 742 34 HOH HOH . C 3 HOH A 43 743 25 HOH HOH . C 3 HOH A 44 744 4 HOH HOH . C 3 HOH A 45 745 18 HOH HOH . C 3 HOH A 46 746 6 HOH HOH . C 3 HOH A 47 747 67 HOH HOH . C 3 HOH A 48 748 52 HOH HOH . C 3 HOH A 49 749 60 HOH HOH . C 3 HOH A 50 750 20 HOH HOH . C 3 HOH A 51 751 23 HOH HOH . C 3 HOH A 52 752 14 HOH HOH . C 3 HOH A 53 753 22 HOH HOH . C 3 HOH A 54 754 36 HOH HOH . C 3 HOH A 55 755 66 HOH HOH . C 3 HOH A 56 756 51 HOH HOH . C 3 HOH A 57 757 55 HOH HOH . C 3 HOH A 58 758 21 HOH HOH . C 3 HOH A 59 759 41 HOH HOH . C 3 HOH A 60 760 47 HOH HOH . C 3 HOH A 61 761 40 HOH HOH . C 3 HOH A 62 762 46 HOH HOH . C 3 HOH A 63 763 65 HOH HOH . C 3 HOH A 64 764 32 HOH HOH . C 3 HOH A 65 765 68 HOH HOH . C 3 HOH A 66 766 38 HOH HOH . C 3 HOH A 67 767 69 HOH HOH . C 3 HOH A 68 768 64 HOH HOH . C 3 HOH A 69 769 57 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C15 649 . . . B 2 1.218 -25.13 -12.19 1 58.36 ? C15 649 601 A 1 HETATM 2 C C16 649 . . . B 2 2.174 -26.035 -12.944 1 57.83 ? C16 649 601 A 1 HETATM 3 C C13 649 . . . B 2 -0.944 -25.232 -10.68 1 55.83 ? C13 649 601 A 1 HETATM 4 C C17 649 . . . B 2 3.17 -25.281 -13.916 1 74.13 ? C17 649 601 A 1 HETATM 5 C C11 649 . . . B 2 -1.51 -27.735 -10.381 1 54.19 ? C11 649 601 A 1 HETATM 6 C C10 649 . . . B 2 -1.981 -28.852 -9.371 1 49.59 ? C10 649 601 A 1 HETATM 7 C C2 649 . . . B 2 -5.746 -33.709 -4.593 1 49.34 ? C2 649 601 A 1 HETATM 8 C C1 649 . . . B 2 -4.735 -32.8 -4.313 1 58.55 ? C1 649 601 A 1 HETATM 9 C C6 649 . . . B 2 -3.76 -32.525 -5.246 1 57.32 ? C6 649 601 A 1 HETATM 10 C C5 649 . . . B 2 -3.783 -33.148 -6.492 1 52.76 ? C5 649 601 A 1 HETATM 11 C C4 649 . . . B 2 -4.799 -34.071 -6.766 1 65.86 ? C4 649 601 A 1 HETATM 12 C C3 649 . . . B 2 -5.769 -34.345 -5.84 1 60.83 ? C3 649 601 A 1 HETATM 13 O O2 649 . . . B 2 2.771 -24.377 -14.55 1 77.66 ? O2 649 601 A 1 HETATM 14 C C14 649 . . . B 2 -0.17 -25.782 -11.93 1 55.59 ? C14 649 601 A 1 HETATM 15 C C12 649 . . . B 2 -1.33 -26.32 -9.706 1 54.86 ? C12 649 601 A 1 HETATM 16 C C9 649 . . . B 2 -1.257 -30.249 -9.681 1 50.2 ? C9 649 601 A 1 HETATM 17 C C8 649 . . . B 2 -2.05 -31.561 -9.354 1 48.48 ? C8 649 601 A 1 HETATM 18 C C7 649 . . . B 2 -2.746 -31.555 -7.975 1 52.64 ? C7 649 601 A 1 HETATM 19 O O1 649 . . . B 2 -2.779 -32.878 -7.453 1 58.69 ? O1 649 601 A 1 HETATM 20 N N6 649 . . . B 2 4.58 -25.711 -14.025 1 79 ? N6 649 601 A 1 HETATM 21 S S 649 . . . B 2 5.785 -24.969 -15.069 1 80.46 ? S 649 601 A 1 HETATM 22 O O4 649 . . . B 2 6.152 -25.861 -16.212 1 81.23 ? O4 649 601 A 1 HETATM 23 O O3 649 . . . B 2 7.121 -24.86 -14.351 1 64.14 ? O3 649 601 A 1 HETATM 24 O O5 649 . . . B 2 5.317 -23.455 -15.604 1 71.4 ? O5 649 601 A 1 HETATM 25 C C18 649 . . . B 2 5.294 -22.428 -14.566 1 63.93 ? C18 649 601 A 1 HETATM 26 C C19 649 . . . B 2 4.821 -21.109 -15.177 1 63.81 ? C19 649 601 A 1 HETATM 27 O O6 649 . . . B 2 3.36 -21.288 -15.835 1 67.48 ? O6 649 601 A 1 HETATM 28 C C22 649 . . . B 2 2.724 -20.168 -15.661 1 64.98 ? C22 649 601 A 1 HETATM 29 C C21 649 . . . B 2 3.657 -19.255 -14.845 1 68.25 ? C21 649 601 A 1 HETATM 30 O O7 649 . . . B 2 4.271 -18.349 -15.675 1 72.09 ? O7 649 601 A 1 HETATM 31 C C20 649 . . . B 2 4.665 -20.236 -14.237 1 61.52 ? C20 649 601 A 1 HETATM 32 O O8 649 . . . B 2 5.973 -19.584 -13.917 1 66.04 ? O8 649 601 A 1 HETATM 33 N N1 649 . . . B 2 1.446 -20.4 -14.906 1 62.5 ? N1 649 601 A 1 HETATM 34 C C25 649 . . . B 2 0.414 -19.531 -14.794 1 57.88 ? C25 649 601 A 1 HETATM 35 N N3 649 . . . B 2 0.206 -18.282 -15.273 1 55.74 ? N3 649 601 A 1 HETATM 36 C C26 649 . . . B 2 -0.921 -17.609 -15.017 1 56.2 ? C26 649 601 A 1 HETATM 37 N N4 649 . . . B 2 -1.897 -18.152 -14.273 1 60.14 ? N4 649 601 A 1 HETATM 38 C C27 649 . . . B 2 -1.759 -19.394 -13.76 1 49.69 ? C27 649 601 A 1 HETATM 39 N N5 649 . . . B 2 -2.847 -19.994 -12.932 1 56.04 ? N5 649 601 A 1 HETATM 40 C C24 649 . . . B 2 -0.578 -20.134 -14.01 1 54.32 ? C24 649 601 A 1 HETATM 41 N N2 649 . . . B 2 -0.104 -21.359 -13.674 1 53.58 ? N2 649 601 A 1 HETATM 42 C C23 649 . . . B 2 1.116 -21.506 -14.219 1 59.9 ? C23 649 601 A 1 # _model_server_stats.io_time_ms 69 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 42 #