data_8IRR # _model_server_result.job_id OLaOEzPlcX5Kes9JO7oVTQ _model_server_result.datetime_utc '2024-11-23 09:51:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8irr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":502}' # _entry.id 8IRR # _exptl.entry_id 8IRR _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 386.654 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CHOLESTEROL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 7 G N N ? 7 H N N ? 7 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 D SG CYS 23 N CYS 22 1_555 D SG CYS 97 N CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf2 D SG CYS 100 N CYS 99 1_555 D SG CYS 108 N CYS 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? disulf ? disulf3 E SG CYS 144 R CYS 96 1_555 E SG CYS 234 R CYS 186 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? # _chem_comp.formula 'C27 H46 O' _chem_comp.formula_weight 386.654 _chem_comp.id CLR _chem_comp.mon_nstd_flag . _chem_comp.name CHOLESTEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 CLR sing 70 n n C1 C10 CLR sing 71 n n C1 H11 CLR sing 72 n n C1 H12 CLR sing 73 n n C2 C3 CLR sing 74 n n C2 H21 CLR sing 75 n n C2 H22 CLR sing 76 n n C3 C4 CLR sing 77 n n C3 O1 CLR sing 78 n n C3 H3 CLR sing 79 n n C4 C5 CLR sing 80 n n C4 H41 CLR sing 81 n n C4 H42 CLR sing 82 n n C5 C6 CLR doub 83 n n C5 C10 CLR sing 84 n n C6 C7 CLR sing 85 n n C6 H6 CLR sing 86 n n C7 C8 CLR sing 87 n n C7 H71 CLR sing 88 n n C7 H72 CLR sing 89 n n C8 C9 CLR sing 90 n n C8 C14 CLR sing 91 n n C8 H8 CLR sing 92 n n C9 C10 CLR sing 93 n n C9 C11 CLR sing 94 n n C9 H9 CLR sing 95 n n C10 C19 CLR sing 96 n n C11 C12 CLR sing 97 n n C11 H111 CLR sing 98 n n C11 H112 CLR sing 99 n n C12 C13 CLR sing 100 n n C12 H121 CLR sing 101 n n C12 H122 CLR sing 102 n n C13 C14 CLR sing 103 n n C13 C17 CLR sing 104 n n C13 C18 CLR sing 105 n n C14 C15 CLR sing 106 n n C14 H14 CLR sing 107 n n C15 C16 CLR sing 108 n n C15 H151 CLR sing 109 n n C15 H152 CLR sing 110 n n C16 C17 CLR sing 111 n n C16 H161 CLR sing 112 n n C16 H162 CLR sing 113 n n C17 C20 CLR sing 114 n n C17 H17 CLR sing 115 n n C18 H181 CLR sing 116 n n C18 H182 CLR sing 117 n n C18 H183 CLR sing 118 n n C19 H191 CLR sing 119 n n C19 H192 CLR sing 120 n n C19 H193 CLR sing 121 n n C20 C21 CLR sing 122 n n C20 C22 CLR sing 123 n n C20 H20 CLR sing 124 n n C21 H211 CLR sing 125 n n C21 H212 CLR sing 126 n n C21 H213 CLR sing 127 n n C22 C23 CLR sing 128 n n C22 H221 CLR sing 129 n n C22 H222 CLR sing 130 n n C23 C24 CLR sing 131 n n C23 H231 CLR sing 132 n n C23 H232 CLR sing 133 n n C24 C25 CLR sing 134 n n C24 H241 CLR sing 135 n n C24 H242 CLR sing 136 n n C25 C26 CLR sing 137 n n C25 C27 CLR sing 138 n n C25 H25 CLR sing 139 n n C26 H261 CLR sing 140 n n C26 H262 CLR sing 141 n n C26 H263 CLR sing 142 n n C27 H271 CLR sing 143 n n C27 H272 CLR sing 144 n n C27 H273 CLR sing 145 n n O1 H1 CLR sing 146 n n # _atom_sites.entry_id 8IRR _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 6 R5F R 1 501 501 R5F LIG . G 7 CLR R 1 502 1 CLR CLR . H 7 CLR R 1 503 2 CLR CLR . I 7 CLR R 1 504 3 CLR CLR . J 8 HOH R 1 601 1 HOH HOH . J 8 HOH R 2 602 2 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CLR . . . G 7 89.975 85.702 126.929 1 20 ? C1 CLR 502 R 1 HETATM 2 C C2 CLR . . . G 7 90.154 84.634 128.03 1 20 ? C2 CLR 502 R 1 HETATM 3 C C3 CLR . . . G 7 90.077 83.215 127.442 1 20 ? C3 CLR 502 R 1 HETATM 4 C C4 CLR . . . G 7 91.128 83.034 126.336 1 20 ? C4 CLR 502 R 1 HETATM 5 C C5 CLR . . . G 7 90.991 84.096 125.25 1 20 ? C5 CLR 502 R 1 HETATM 6 C C6 CLR . . . G 7 90.866 83.735 123.971 1 20 ? C6 CLR 502 R 1 HETATM 7 C C7 CLR . . . G 7 90.679 84.689 122.825 1 20 ? C7 CLR 502 R 1 HETATM 8 C C8 CLR . . . G 7 91.094 86.129 123.183 1 20 ? C8 CLR 502 R 1 HETATM 9 C C9 CLR . . . G 7 90.502 86.528 124.566 1 20 ? C9 CLR 502 R 1 HETATM 10 C C10 CLR . . . G 7 90.972 85.564 125.728 1 20 ? C10 CLR 502 R 1 HETATM 11 C C11 CLR . . . G 7 90.728 88.051 124.863 1 20 ? C11 CLR 502 R 1 HETATM 12 C C12 CLR . . . G 7 90.257 88.987 123.719 1 20 ? C12 CLR 502 R 1 HETATM 13 C C13 CLR . . . G 7 90.894 88.601 122.349 1 20 ? C13 CLR 502 R 1 HETATM 14 C C14 CLR . . . G 7 90.561 87.109 122.114 1 20 ? C14 CLR 502 R 1 HETATM 15 C C15 CLR . . . G 7 90.907 86.86 120.651 1 20 ? C15 CLR 502 R 1 HETATM 16 C C16 CLR . . . G 7 90.382 88.146 119.977 1 20 ? C16 CLR 502 R 1 HETATM 17 C C17 CLR . . . G 7 90.209 89.234 121.084 1 20 ? C17 CLR 502 R 1 HETATM 18 C C18 CLR . . . G 7 92.437 88.88 122.355 1 20 ? C18 CLR 502 R 1 HETATM 19 C C19 CLR . . . G 7 92.401 85.941 126.197 1 20 ? C19 CLR 502 R 1 HETATM 20 C C20 CLR . . . G 7 90.636 90.675 120.61 1 20 ? C20 CLR 502 R 1 HETATM 21 C C21 CLR . . . G 7 90.445 91.738 121.725 1 20 ? C21 CLR 502 R 1 HETATM 22 C C22 CLR . . . G 7 89.83 91.071 119.33 1 20 ? C22 CLR 502 R 1 HETATM 23 C C23 CLR . . . G 7 90.086 92.49 118.751 1 20 ? C23 CLR 502 R 1 HETATM 24 C C24 CLR . . . G 7 88.981 93.521 119.104 1 20 ? C24 CLR 502 R 1 HETATM 25 C C25 CLR . . . G 7 89.052 94.826 118.261 1 20 ? C25 CLR 502 R 1 HETATM 26 C C26 CLR . . . G 7 90.32 95.662 118.552 1 20 ? C26 CLR 502 R 1 HETATM 27 C C27 CLR . . . G 7 87.785 95.675 118.495 1 20 ? C27 CLR 502 R 1 HETATM 28 O O1 CLR . . . G 7 90.291 82.26 128.472 1 20 ? O1 CLR 502 R 1 HETATM 29 H H11 CLR . . . G 7 88.96 85.624 126.54 1 20 ? H11 CLR 502 R 1 HETATM 30 H H12 CLR . . . G 7 90.102 86.688 127.376 1 20 ? H12 CLR 502 R 1 HETATM 31 H H21 CLR . . . G 7 91.126 84.771 128.504 1 20 ? H21 CLR 502 R 1 HETATM 32 H H22 CLR . . . G 7 89.37 84.755 128.778 1 20 ? H22 CLR 502 R 1 HETATM 33 H H3 CLR . . . G 7 89.085 83.061 127.017 1 20 ? H3 CLR 502 R 1 HETATM 34 H H41 CLR . . . G 7 92.122 83.107 126.778 1 20 ? H41 CLR 502 R 1 HETATM 35 H H42 CLR . . . G 7 91.008 82.048 125.888 1 20 ? H42 CLR 502 R 1 HETATM 36 H H6 CLR . . . G 7 90.902 82.68 123.743 1 20 ? H6 CLR 502 R 1 HETATM 37 H H71 CLR . . . G 7 91.285 84.349 121.985 1 20 ? H71 CLR 502 R 1 HETATM 38 H H72 CLR . . . G 7 89.63 84.686 122.529 1 20 ? H72 CLR 502 R 1 HETATM 39 H H8 CLR . . . G 7 92.181 86.193 123.223 1 20 ? H8 CLR 502 R 1 HETATM 40 H H9 CLR . . . G 7 89.423 86.394 124.482 1 20 ? H9 CLR 502 R 1 HETATM 41 H H111 CLR . . . G 7 90.178 88.31 125.768 1 20 ? H111 CLR 502 R 1 HETATM 42 H H112 CLR . . . G 7 91.79 88.22 125.039 1 20 ? H112 CLR 502 R 1 HETATM 43 H H121 CLR . . . G 7 90.541 90.011 123.963 1 20 ? H121 CLR 502 R 1 HETATM 44 H H122 CLR . . . G 7 89.172 88.929 123.636 1 20 ? H122 CLR 502 R 1 HETATM 45 H H14 CLR . . . G 7 89.475 87.04 122.172 1 20 ? H14 CLR 502 R 1 HETATM 46 H H151 CLR . . . G 7 91.982 86.75 120.511 1 20 ? H151 CLR 502 R 1 HETATM 47 H H152 CLR . . . G 7 90.378 85.985 120.274 1 20 ? H152 CLR 502 R 1 HETATM 48 H H161 CLR . . . G 7 89.422 87.948 119.5 1 20 ? H161 CLR 502 R 1 HETATM 49 H H162 CLR . . . G 7 91.099 88.49 119.232 1 20 ? H162 CLR 502 R 1 HETATM 50 H H17 CLR . . . G 7 89.142 89.285 121.303 1 20 ? H17 CLR 502 R 1 HETATM 51 H H181 CLR . . . G 7 92.933 88.168 123.014 1 20 ? H181 CLR 502 R 1 HETATM 52 H H182 CLR . . . G 7 92.829 88.773 121.344 1 20 ? H182 CLR 502 R 1 HETATM 53 H H183 CLR . . . G 7 92.622 89.894 122.711 1 20 ? H183 CLR 502 R 1 HETATM 54 H H191 CLR . . . G 7 92.874 85.073 126.657 1 20 ? H191 CLR 502 R 1 HETATM 55 H H192 CLR . . . G 7 92.343 86.751 126.924 1 20 ? H192 CLR 502 R 1 HETATM 56 H H193 CLR . . . G 7 92.991 86.264 125.34 1 20 ? H193 CLR 502 R 1 HETATM 57 H H20 CLR . . . G 7 91.694 90.646 120.348 1 20 ? H20 CLR 502 R 1 HETATM 58 H H211 CLR . . . G 7 90.473 92.735 121.286 1 20 ? H211 CLR 502 R 1 HETATM 59 H H212 CLR . . . G 7 89.483 91.584 122.213 1 20 ? H212 CLR 502 R 1 HETATM 60 H H213 CLR . . . G 7 91.244 91.642 122.46 1 20 ? H213 CLR 502 R 1 HETATM 61 H H221 CLR . . . G 7 90.073 90.348 118.551 1 20 ? H221 CLR 502 R 1 HETATM 62 H H222 CLR . . . G 7 88.767 90.983 119.556 1 20 ? H222 CLR 502 R 1 HETATM 63 H H231 CLR . . . G 7 91.035 92.855 119.145 1 20 ? H231 CLR 502 R 1 HETATM 64 H H232 CLR . . . G 7 90.162 92.417 117.666 1 20 ? H232 CLR 502 R 1 HETATM 65 H H241 CLR . . . G 7 88.01 93.055 118.936 1 20 ? H241 CLR 502 R 1 HETATM 66 H H242 CLR . . . G 7 89.068 93.78 120.159 1 20 ? H242 CLR 502 R 1 HETATM 67 H H25 CLR . . . G 7 89.074 94.542 117.209 1 20 ? H25 CLR 502 R 1 HETATM 68 H H261 CLR . . . G 7 91.206 95.05 118.383 1 20 ? H261 CLR 502 R 1 HETATM 69 H H262 CLR . . . G 7 90.344 96.527 117.89 1 20 ? H262 CLR 502 R 1 HETATM 70 H H263 CLR . . . G 7 90.303 95.998 119.589 1 20 ? H263 CLR 502 R 1 HETATM 71 H H271 CLR . . . G 7 87.843 96.587 117.901 1 20 ? H271 CLR 502 R 1 HETATM 72 H H272 CLR . . . G 7 87.711 95.934 119.551 1 20 ? H272 CLR 502 R 1 HETATM 73 H H273 CLR . . . G 7 86.905 95.104 118.199 1 20 ? H273 CLR 502 R 1 HETATM 74 H H1 CLR . . . G 7 89.634 81.563 128.404 1 20 ? H1 CLR 502 R 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 214 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 74 #