data_8ISP # _model_server_result.job_id 0B-AxvtSl0Nya7EoJZh7tw _model_server_result.datetime_utc '2024-11-30 20:57:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8isp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 8ISP # _exptl.entry_id 8ISP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 365.404 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(R)-2-((R)-((R)-2-amino-2-phenylacetamido)(carboxy)methyl)-5-methyl-3,6-dihydro-2H-1,3-thiazine-4-carboxylic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8ISP _cell.length_a 62.118 _cell.length_b 62.118 _cell.length_c 150.448 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8ISP _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall 'P 4abw 2nw' _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id OG _struct_conn.ptnr1_label_comp_id SER _struct_conn.ptnr1_label_seq_id 49 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id SER _struct_conn.ptnr1_auth_seq_id 70 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C15 _struct_conn.ptnr2_label_comp_id Q53 _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id Q53 _struct_conn.ptnr2_auth_seq_id 301 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.373 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C16 H19 N3 O5 S' _chem_comp.formula_weight 365.404 _chem_comp.id Q53 _chem_comp.mon_nstd_flag . _chem_comp.name '(R)-2-((R)-((R)-2-amino-2-phenylacetamido)(carboxy)methyl)-5-methyl-3,6-dihydro-2H-1,3-thiazine-4-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms cephalexin # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N17 C12 Q53 sing 277 n n C12 C13 Q53 sing 278 n n C12 C04 Q53 sing 279 n n O20 C13 Q53 doub 280 n n C13 N18 Q53 sing 281 n n C04 C05 Q53 doub 282 n y C04 C02 Q53 sing 283 n y C05 C07 Q53 sing 284 n y C02 C11 Q53 doub 285 n y N18 C14 Q53 sing 286 n n O21 C15 Q53 doub 287 n n C07 C09 Q53 doub 288 n y C11 C09 Q53 sing 289 n y C15 C14 Q53 sing 290 n n C14 C03 Q53 sing 291 n n C03 S24 Q53 sing 292 n n C03 N19 Q53 sing 293 n n S24 C06 Q53 sing 294 n n C06 C08 Q53 sing 295 n n N19 C10 Q53 sing 296 n n C10 C08 Q53 doub 297 n n C10 C16 Q53 sing 298 n n C08 C01 Q53 sing 299 n n O22 C16 Q53 doub 300 n n C16 O23 Q53 sing 301 n n C01 H3 Q53 sing 302 n n C01 H4 Q53 sing 303 n n C01 H5 Q53 sing 304 n n C02 H6 Q53 sing 305 n n C03 H7 Q53 sing 306 n n C05 H8 Q53 sing 307 n n C06 H9 Q53 sing 308 n n C06 H10 Q53 sing 309 n n C07 H11 Q53 sing 310 n n C09 H13 Q53 sing 311 n n C11 H14 Q53 sing 312 n n C12 H15 Q53 sing 313 n n C14 H16 Q53 sing 314 n n N17 H17 Q53 sing 315 n n N17 H18 Q53 sing 316 n n N18 H20 Q53 sing 317 n n N19 H21 Q53 sing 318 n n O23 H23 Q53 sing 319 n n C15 O1 Q53 sing 320 n n O1 H1 Q53 sing 321 n n # _atom_sites.entry_id 8ISP _atom_sites.fract_transf_matrix[1][1] 0.016098 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016098 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006647 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 Q53 A 1 301 1 Q53 LIG . C 3 HOH A 1 401 14 HOH HOH . C 3 HOH A 2 402 196 HOH HOH . C 3 HOH A 3 403 33 HOH HOH . C 3 HOH A 4 404 13 HOH HOH . C 3 HOH A 5 405 64 HOH HOH . C 3 HOH A 6 406 18 HOH HOH . C 3 HOH A 7 407 55 HOH HOH . C 3 HOH A 8 408 1 HOH HOH . C 3 HOH A 9 409 38 HOH HOH . C 3 HOH A 10 410 138 HOH HOH . C 3 HOH A 11 411 103 HOH HOH . C 3 HOH A 12 412 71 HOH HOH . C 3 HOH A 13 413 6 HOH HOH . C 3 HOH A 14 414 57 HOH HOH . C 3 HOH A 15 415 27 HOH HOH . C 3 HOH A 16 416 90 HOH HOH . C 3 HOH A 17 417 104 HOH HOH . C 3 HOH A 18 418 181 HOH HOH . C 3 HOH A 19 419 94 HOH HOH . C 3 HOH A 20 420 129 HOH HOH . C 3 HOH A 21 421 188 HOH HOH . C 3 HOH A 22 422 67 HOH HOH . C 3 HOH A 23 423 174 HOH HOH . C 3 HOH A 24 424 23 HOH HOH . C 3 HOH A 25 425 100 HOH HOH . C 3 HOH A 26 426 91 HOH HOH . C 3 HOH A 27 427 106 HOH HOH . C 3 HOH A 28 428 86 HOH HOH . C 3 HOH A 29 429 97 HOH HOH . C 3 HOH A 30 430 28 HOH HOH . C 3 HOH A 31 431 146 HOH HOH . C 3 HOH A 32 432 95 HOH HOH . C 3 HOH A 33 433 113 HOH HOH . C 3 HOH A 34 434 73 HOH HOH . C 3 HOH A 35 435 42 HOH HOH . C 3 HOH A 36 436 139 HOH HOH . C 3 HOH A 37 437 156 HOH HOH . C 3 HOH A 38 438 10 HOH HOH . C 3 HOH A 39 439 144 HOH HOH . C 3 HOH A 40 440 74 HOH HOH . C 3 HOH A 41 441 22 HOH HOH . C 3 HOH A 42 442 68 HOH HOH . C 3 HOH A 43 443 84 HOH HOH . C 3 HOH A 44 444 9 HOH HOH . C 3 HOH A 45 445 2 HOH HOH . C 3 HOH A 46 446 24 HOH HOH . C 3 HOH A 47 447 30 HOH HOH . C 3 HOH A 48 448 41 HOH HOH . C 3 HOH A 49 449 17 HOH HOH . C 3 HOH A 50 450 21 HOH HOH . C 3 HOH A 51 451 109 HOH HOH . C 3 HOH A 52 452 125 HOH HOH . C 3 HOH A 53 453 70 HOH HOH . C 3 HOH A 54 454 4 HOH HOH . C 3 HOH A 55 455 107 HOH HOH . C 3 HOH A 56 456 48 HOH HOH . C 3 HOH A 57 457 176 HOH HOH . C 3 HOH A 58 458 111 HOH HOH . C 3 HOH A 59 459 35 HOH HOH . C 3 HOH A 60 460 197 HOH HOH . C 3 HOH A 61 461 40 HOH HOH . C 3 HOH A 62 462 49 HOH HOH . C 3 HOH A 63 463 66 HOH HOH . C 3 HOH A 64 464 5 HOH HOH . C 3 HOH A 65 465 26 HOH HOH . C 3 HOH A 66 466 169 HOH HOH . C 3 HOH A 67 467 37 HOH HOH . C 3 HOH A 68 468 160 HOH HOH . C 3 HOH A 69 469 128 HOH HOH . C 3 HOH A 70 470 53 HOH HOH . C 3 HOH A 71 471 117 HOH HOH . C 3 HOH A 72 472 126 HOH HOH . C 3 HOH A 73 473 112 HOH HOH . C 3 HOH A 74 474 20 HOH HOH . C 3 HOH A 75 475 47 HOH HOH . C 3 HOH A 76 476 59 HOH HOH . C 3 HOH A 77 477 51 HOH HOH . C 3 HOH A 78 478 151 HOH HOH . C 3 HOH A 79 479 158 HOH HOH . C 3 HOH A 80 480 11 HOH HOH . C 3 HOH A 81 481 115 HOH HOH . C 3 HOH A 82 482 36 HOH HOH . C 3 HOH A 83 483 25 HOH HOH . C 3 HOH A 84 484 3 HOH HOH . C 3 HOH A 85 485 34 HOH HOH . C 3 HOH A 86 486 82 HOH HOH . C 3 HOH A 87 487 16 HOH HOH . C 3 HOH A 88 488 39 HOH HOH . C 3 HOH A 89 489 12 HOH HOH . C 3 HOH A 90 490 77 HOH HOH . C 3 HOH A 91 491 81 HOH HOH . C 3 HOH A 92 492 161 HOH HOH . C 3 HOH A 93 493 175 HOH HOH . C 3 HOH A 94 494 19 HOH HOH . C 3 HOH A 95 495 85 HOH HOH . C 3 HOH A 96 496 132 HOH HOH . C 3 HOH A 97 497 56 HOH HOH . C 3 HOH A 98 498 45 HOH HOH . C 3 HOH A 99 499 15 HOH HOH . C 3 HOH A 100 500 62 HOH HOH . C 3 HOH A 101 501 149 HOH HOH . C 3 HOH A 102 502 170 HOH HOH . C 3 HOH A 103 503 88 HOH HOH . C 3 HOH A 104 504 118 HOH HOH . C 3 HOH A 105 505 54 HOH HOH . C 3 HOH A 106 506 78 HOH HOH . C 3 HOH A 107 507 148 HOH HOH . C 3 HOH A 108 508 46 HOH HOH . C 3 HOH A 109 509 163 HOH HOH . C 3 HOH A 110 510 43 HOH HOH . C 3 HOH A 111 511 72 HOH HOH . C 3 HOH A 112 512 8 HOH HOH . C 3 HOH A 113 513 105 HOH HOH . C 3 HOH A 114 514 61 HOH HOH . C 3 HOH A 115 515 123 HOH HOH . C 3 HOH A 116 516 60 HOH HOH . C 3 HOH A 117 517 133 HOH HOH . C 3 HOH A 118 518 69 HOH HOH . C 3 HOH A 119 519 63 HOH HOH . C 3 HOH A 120 520 96 HOH HOH . C 3 HOH A 121 521 177 HOH HOH . C 3 HOH A 122 522 44 HOH HOH . C 3 HOH A 123 523 165 HOH HOH . C 3 HOH A 124 524 80 HOH HOH . C 3 HOH A 125 525 108 HOH HOH . C 3 HOH A 126 526 89 HOH HOH . C 3 HOH A 127 527 76 HOH HOH . C 3 HOH A 128 528 101 HOH HOH . C 3 HOH A 129 529 199 HOH HOH . C 3 HOH A 130 530 79 HOH HOH . C 3 HOH A 131 531 114 HOH HOH . C 3 HOH A 132 532 136 HOH HOH . C 3 HOH A 133 533 159 HOH HOH . C 3 HOH A 134 534 134 HOH HOH . C 3 HOH A 135 535 50 HOH HOH . C 3 HOH A 136 536 140 HOH HOH . C 3 HOH A 137 537 178 HOH HOH . C 3 HOH A 138 538 93 HOH HOH . C 3 HOH A 139 539 52 HOH HOH . C 3 HOH A 140 540 189 HOH HOH . C 3 HOH A 141 541 98 HOH HOH . C 3 HOH A 142 542 198 HOH HOH . C 3 HOH A 143 543 166 HOH HOH . C 3 HOH A 144 544 92 HOH HOH . C 3 HOH A 145 545 152 HOH HOH . C 3 HOH A 146 546 153 HOH HOH . C 3 HOH A 147 547 171 HOH HOH . C 3 HOH A 148 548 121 HOH HOH . C 3 HOH A 149 549 32 HOH HOH . C 3 HOH A 150 550 191 HOH HOH . C 3 HOH A 151 551 31 HOH HOH . C 3 HOH A 152 552 182 HOH HOH . C 3 HOH A 153 553 184 HOH HOH . C 3 HOH A 154 554 194 HOH HOH . C 3 HOH A 155 555 183 HOH HOH . C 3 HOH A 156 556 137 HOH HOH . C 3 HOH A 157 557 75 HOH HOH . C 3 HOH A 158 558 193 HOH HOH . C 3 HOH A 159 559 131 HOH HOH . C 3 HOH A 160 560 172 HOH HOH . C 3 HOH A 161 561 120 HOH HOH . C 3 HOH A 162 562 141 HOH HOH . C 3 HOH A 163 563 102 HOH HOH . C 3 HOH A 164 564 110 HOH HOH . C 3 HOH A 165 565 83 HOH HOH . C 3 HOH A 166 566 173 HOH HOH . C 3 HOH A 167 567 164 HOH HOH . C 3 HOH A 168 568 192 HOH HOH . C 3 HOH A 169 569 145 HOH HOH . C 3 HOH A 170 570 29 HOH HOH . C 3 HOH A 171 571 180 HOH HOH . C 3 HOH A 172 572 7 HOH HOH . C 3 HOH A 173 573 195 HOH HOH . C 3 HOH A 174 574 190 HOH HOH . C 3 HOH A 175 575 157 HOH HOH . C 3 HOH A 176 576 142 HOH HOH . C 3 HOH A 177 577 155 HOH HOH . C 3 HOH A 178 578 119 HOH HOH . C 3 HOH A 179 579 143 HOH HOH . C 3 HOH A 180 580 135 HOH HOH . C 3 HOH A 181 581 124 HOH HOH . C 3 HOH A 182 582 99 HOH HOH . C 3 HOH A 183 583 58 HOH HOH . C 3 HOH A 184 584 162 HOH HOH . C 3 HOH A 185 585 127 HOH HOH . C 3 HOH A 186 586 154 HOH HOH . C 3 HOH A 187 587 186 HOH HOH . C 3 HOH A 188 588 87 HOH HOH . C 3 HOH A 189 589 65 HOH HOH . C 3 HOH A 190 590 168 HOH HOH . C 3 HOH A 191 591 185 HOH HOH . C 3 HOH A 192 592 167 HOH HOH . C 3 HOH A 193 593 122 HOH HOH . C 3 HOH A 194 594 150 HOH HOH . C 3 HOH A 195 595 130 HOH HOH . C 3 HOH A 196 596 147 HOH HOH . C 3 HOH A 197 597 116 HOH HOH . C 3 HOH A 198 598 179 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 Q53 . . . B 2 2.341 8.975 -12.649 1 22.96 ? C10 Q53 301 A 1 HETATM 2 C C13 Q53 . . . B 2 3.831 7.155 -17.006 1 21.98 ? C13 Q53 301 A 1 HETATM 3 C C15 Q53 . . . B 2 0.537 7.472 -15.405 1 23.35 ? C15 Q53 301 A 1 HETATM 4 C C01 Q53 . . . B 2 4.269 10.501 -12.156 1 17.75 ? C01 Q53 301 A 1 HETATM 5 C C02 Q53 . . . B 2 6.862 7.685 -16.418 1 24.43 ? C02 Q53 301 A 1 HETATM 6 C C03 Q53 . . . B 2 2.33 6.667 -13.892 1 21.27 ? C03 Q53 301 A 1 HETATM 7 C C04 Q53 . . . B 2 5.888 8.566 -16.864 1 20.8 ? C04 Q53 301 A 1 HETATM 8 C C05 Q53 . . . B 2 5.92 9.894 -16.473 1 23.53 ? C05 Q53 301 A 1 HETATM 9 C C06 Q53 . . . B 2 4.636 8.374 -13.476 1 19.65 ? C06 Q53 301 A 1 HETATM 10 C C07 Q53 . . . B 2 6.931 10.345 -15.638 1 25.9 ? C07 Q53 301 A 1 HETATM 11 C C08 Q53 . . . B 2 3.666 9.176 -12.621 1 26.57 ? C08 Q53 301 A 1 HETATM 12 C C09 Q53 . . . B 2 7.907 9.466 -15.194 1 27 ? C09 Q53 301 A 1 HETATM 13 C C11 Q53 . . . B 2 7.873 8.137 -15.583 1 23.34 ? C11 Q53 301 A 1 HETATM 14 C C12 Q53 . . . B 2 4.772 8.074 -17.782 1 24.77 ? C12 Q53 301 A 1 HETATM 15 C C14 Q53 . . . B 2 1.938 6.857 -15.359 1 23.1 ? C14 Q53 301 A 1 HETATM 16 C C16 Q53 . . . B 2 1.339 9.805 -11.826 1 24.73 ? C16 Q53 301 A 1 HETATM 17 N N17 Q53 . . . B 2 5.334 7.345 -18.906 1 25.96 ? N17 Q53 301 A 1 HETATM 18 N N18 Q53 . . . B 2 2.852 7.722 -16.091 1 21.67 ? N18 Q53 301 A 1 HETATM 19 N N19 Q53 . . . B 2 1.734 7.719 -13.079 1 19.54 ? N19 Q53 301 A 1 HETATM 20 O O20 Q53 . . . B 2 3.903 5.981 -17.153 1 22.52 ? O20 Q53 301 A 1 HETATM 21 O O21 Q53 . . . B 2 0.362 8.541 -15.886 1 23.74 ? O21 Q53 301 A 1 HETATM 22 O O22 Q53 . . . B 2 0.109 9.615 -12.034 1 23.46 -1 O22 Q53 301 A 1 HETATM 23 O O23 Q53 . . . B 2 1.659 10.642 -10.939 1 23.52 ? O23 Q53 301 A 1 HETATM 24 S S24 Q53 . . . B 2 4.125 6.655 -13.674 1 22.41 ? S24 Q53 301 A 1 # _model_server_stats.io_time_ms 48 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 41 _model_server_stats.element_count 24 #