data_8IT9
#
_model_server_result.job_id            9yZ2WRRCwsoog3Bk464aMQ 
_model_server_result.datetime_utc      '2024-11-14 22:12:18' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8it9 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":602}' 
#
_entry.id    8IT9 
#
_exptl.entry_id    8IT9 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              146.098 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '2-OXOGLUTARIC ACID' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            8IT9 
_cell.length_a            142.189 
_cell.length_b            142.189 
_cell.length_c            84.358 
_cell.Z_PDB               9 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8IT9 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        146 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'H 3' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C5 H6 O5' 
_chem_comp.formula_weight    146.098 
_chem_comp.id                AKG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '2-OXOGLUTARIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 AKG doub 1 n n 
C1 O2 AKG sing 2 n n 
C1 C2 AKG sing 3 n n 
O2 HO2 AKG sing 4 n n 
C2 O5 AKG doub 5 n n 
C2 C3 AKG sing 6 n n 
C3 C4 AKG sing 7 n n 
C3 H31 AKG sing 8 n n 
C3 H32 AKG sing 9 n n 
C4 C5 AKG sing 10 n n 
C4 H41 AKG sing 11 n n 
C4 H42 AKG sing 12 n n 
C5 O3 AKG doub 13 n n 
C5 O4 AKG sing 14 n n 
O4 HO4 AKG sing 15 n n 
#
_atom_sites.entry_id                     8IT9 
_atom_sites.fract_transf_matrix[1][1]    0.007033 
_atom_sites.fract_transf_matrix[1][2]    0.00406 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008121 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011854 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ZL6 A 1 601 1 ZL6 ZL6 . 
C 3 AKG A 1 602 1 AKG AKG . 
D 4 HOH A 1 701 32 HOH HOH . 
D 4 HOH A 2 702 86 HOH HOH . 
D 4 HOH A 3 703 49 HOH HOH . 
D 4 HOH A 4 704 70 HOH HOH . 
D 4 HOH A 5 705 59 HOH HOH . 
D 4 HOH A 6 706 60 HOH HOH . 
D 4 HOH A 7 707 26 HOH HOH . 
D 4 HOH A 8 708 39 HOH HOH . 
D 4 HOH A 9 709 45 HOH HOH . 
D 4 HOH A 10 710 61 HOH HOH . 
D 4 HOH A 11 711 82 HOH HOH . 
D 4 HOH A 12 712 9 HOH HOH . 
D 4 HOH A 13 713 88 HOH HOH . 
D 4 HOH A 14 714 83 HOH HOH . 
D 4 HOH A 15 715 58 HOH HOH . 
D 4 HOH A 16 716 89 HOH HOH . 
D 4 HOH A 17 717 47 HOH HOH . 
D 4 HOH A 18 718 23 HOH HOH . 
D 4 HOH A 19 719 28 HOH HOH . 
D 4 HOH A 20 720 11 HOH HOH . 
D 4 HOH A 21 721 41 HOH HOH . 
D 4 HOH A 22 722 67 HOH HOH . 
D 4 HOH A 23 723 21 HOH HOH . 
D 4 HOH A 24 724 48 HOH HOH . 
D 4 HOH A 25 725 37 HOH HOH . 
D 4 HOH A 26 726 18 HOH HOH . 
D 4 HOH A 27 727 87 HOH HOH . 
D 4 HOH A 28 728 50 HOH HOH . 
D 4 HOH A 29 729 71 HOH HOH . 
D 4 HOH A 30 730 74 HOH HOH . 
D 4 HOH A 31 731 46 HOH HOH . 
D 4 HOH A 32 732 52 HOH HOH . 
D 4 HOH A 33 733 1 HOH HOH . 
D 4 HOH A 34 734 42 HOH HOH . 
D 4 HOH A 35 735 22 HOH HOH . 
D 4 HOH A 36 736 13 HOH HOH . 
D 4 HOH A 37 737 8 HOH HOH . 
D 4 HOH A 38 738 36 HOH HOH . 
D 4 HOH A 39 739 20 HOH HOH . 
D 4 HOH A 40 740 66 HOH HOH . 
D 4 HOH A 41 741 31 HOH HOH . 
D 4 HOH A 42 742 30 HOH HOH . 
D 4 HOH A 43 743 17 HOH HOH . 
D 4 HOH A 44 744 27 HOH HOH . 
D 4 HOH A 45 745 43 HOH HOH . 
D 4 HOH A 46 746 72 HOH HOH . 
D 4 HOH A 47 747 14 HOH HOH . 
D 4 HOH A 48 748 25 HOH HOH . 
D 4 HOH A 49 749 78 HOH HOH . 
D 4 HOH A 50 750 68 HOH HOH . 
D 4 HOH A 51 751 56 HOH HOH . 
D 4 HOH A 52 752 33 HOH HOH . 
D 4 HOH A 53 753 44 HOH HOH . 
D 4 HOH A 54 754 64 HOH HOH . 
D 4 HOH A 55 755 40 HOH HOH . 
D 4 HOH A 56 756 69 HOH HOH . 
D 4 HOH A 57 757 53 HOH HOH . 
D 4 HOH A 58 758 63 HOH HOH . 
D 4 HOH A 59 759 10 HOH HOH . 
D 4 HOH A 60 760 73 HOH HOH . 
D 4 HOH A 61 761 35 HOH HOH . 
D 4 HOH A 62 762 19 HOH HOH . 
D 4 HOH A 63 763 7 HOH HOH . 
D 4 HOH A 64 764 75 HOH HOH . 
D 4 HOH A 65 765 57 HOH HOH . 
D 4 HOH A 66 766 54 HOH HOH . 
D 4 HOH A 67 767 62 HOH HOH . 
D 4 HOH A 68 768 38 HOH HOH . 
D 4 HOH A 69 769 85 HOH HOH . 
D 4 HOH A 70 770 34 HOH HOH . 
D 4 HOH A 71 771 55 HOH HOH . 
D 4 HOH A 72 772 24 HOH HOH . 
D 4 HOH A 73 773 77 HOH HOH . 
D 4 HOH A 74 774 29 HOH HOH . 
D 4 HOH A 75 775 80 HOH HOH . 
D 4 HOH A 76 776 51 HOH HOH . 
D 4 HOH A 77 777 84 HOH HOH . 
D 4 HOH A 78 778 81 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 AKG . . . C 3 30.258 -6.802 -25.307 1 54.48 ? C1 AKG 602 A 1 
HETATM 2 O O1 AKG . . . C 3 29.63 -7.641 -25.996 1 53.16 ? O1 AKG 602 A 1 
HETATM 3 O O2 AKG . . . C 3 29.845 -5.635 -25.186 1 55.58 ? O2 AKG 602 A 1 
HETATM 4 C C2 AKG . . . C 3 31.504 -7.151 -24.621 1 54.11 ? C2 AKG 602 A 1 
HETATM 5 O O5 AKG . . . C 3 32.303 -6.27 -24.32 1 51.35 ? O5 AKG 602 A 1 
HETATM 6 C C3 AKG . . . C 3 31.807 -8.59 -24.279 1 52.89 ? C3 AKG 602 A 1 
HETATM 7 C C4 AKG . . . C 3 33.185 -8.984 -24.824 1 53.34 ? C4 AKG 602 A 1 
HETATM 8 C C5 AKG . . . C 3 34.261 -9.079 -23.762 1 52.97 ? C5 AKG 602 A 1 
HETATM 9 O O3 AKG . . . C 3 35.395 -9.441 -24.138 1 54.01 ? O3 AKG 602 A 1 
HETATM 10 O O4 AKG . . . C 3 34.018 -8.806 -22.564 1 52.68 ? O4 AKG 602 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           20 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           285 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           10 
#