data_8ITT # _model_server_result.job_id JhbgmtHjCu-O8v1lSH-hxQ _model_server_result.datetime_utc '2024-11-23 12:38:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8itt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":601}' # _entry.id 8ITT # _exptl.entry_id 8ITT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 228.371 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MYRISTIC ACID' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 104.78 _cell.angle_gamma 90 _cell.entry_id 8ITT _cell.length_a 95.262 _cell.length_b 38.467 _cell.length_c 182.455 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8ITT _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H 1 1 B,I,J,K,L,M,N 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 I N N ? 2 J N N ? 2 N N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 51 A CYS 53 1_555 A SG CYS 60 A CYS 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? disulf ? disulf2 A SG CYS 73 A CYS 75 1_555 A SG CYS 89 A CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf3 A SG CYS 88 A CYS 90 1_555 A SG CYS 99 A CYS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf4 A SG CYS 122 A CYS 124 1_555 A SG CYS 167 A CYS 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? disulf ? disulf5 A SG CYS 166 A CYS 168 1_555 A SG CYS 175 A CYS 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf6 A SG CYS 198 A CYS 200 1_555 A SG CYS 244 A CYS 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf7 A SG CYS 243 A CYS 245 1_555 A SG CYS 251 A CYS 253 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf8 A SG CYS 263 A CYS 265 1_555 A SG CYS 277 A CYS 279 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf9 A SG CYS 276 A CYS 278 1_555 A SG CYS 287 A CYS 289 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? disulf ? disulf10 A SG CYS 314 A CYS 316 1_555 A SG CYS 359 A CYS 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? disulf ? disulf11 A SG CYS 358 A CYS 360 1_555 A SG CYS 367 A CYS 369 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? disulf ? disulf12 A SG CYS 390 A CYS 392 1_555 A SG CYS 436 A CYS 438 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf13 A SG CYS 435 A CYS 437 1_555 A SG CYS 446 A CYS 448 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? disulf ? disulf14 A SG CYS 459 A CYS 461 1_555 A SG CYS 475 A CYS 477 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? disulf ? disulf15 A SG CYS 474 A CYS 476 1_555 A SG CYS 485 A CYS 487 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? disulf ? disulf16 A SG CYS 512 A CYS 514 1_555 A SG CYS 557 A CYS 559 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf17 A SG CYS 556 A CYS 558 1_555 A SG CYS 565 A CYS 567 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf18 B SG CYS 51 B CYS 53 1_555 B SG CYS 60 B CYS 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf19 B SG CYS 73 B CYS 75 1_555 B SG CYS 89 B CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf20 B SG CYS 88 B CYS 90 1_555 B SG CYS 99 B CYS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf21 B SG CYS 122 B CYS 124 1_555 B SG CYS 167 B CYS 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? disulf ? disulf22 B SG CYS 166 B CYS 168 1_555 B SG CYS 175 B CYS 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? disulf ? disulf23 B SG CYS 198 B CYS 200 1_555 B SG CYS 244 B CYS 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? disulf ? disulf24 B SG CYS 243 B CYS 245 1_555 B SG CYS 251 B CYS 253 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf25 B SG CYS 263 B CYS 265 1_555 B SG CYS 277 B CYS 279 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.008 ? disulf ? disulf26 B SG CYS 276 B CYS 278 1_555 B SG CYS 287 B CYS 289 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf27 B SG CYS 314 B CYS 316 1_555 B SG CYS 359 B CYS 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf28 B SG CYS 358 B CYS 360 1_555 B SG CYS 367 B CYS 369 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? disulf ? disulf29 B SG CYS 390 B CYS 392 1_555 B SG CYS 436 B CYS 438 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf30 B SG CYS 435 B CYS 437 1_555 B SG CYS 446 B CYS 448 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? disulf ? disulf31 B SG CYS 459 B CYS 461 1_555 B SG CYS 475 B CYS 477 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? disulf ? disulf32 B SG CYS 474 B CYS 476 1_555 B SG CYS 485 B CYS 487 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf33 B SG CYS 512 B CYS 514 1_555 B SG CYS 557 B CYS 559 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf34 B SG CYS 556 B CYS 558 1_555 B SG CYS 565 B CYS 567 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.003 ? # _chem_comp.formula 'C14 H28 O2' _chem_comp.formula_weight 228.371 _chem_comp.id MYR _chem_comp.mon_nstd_flag . _chem_comp.name 'MYRISTIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 MYR doub 312 n n C1 O2 MYR sing 313 n n C1 C2 MYR sing 314 n n O2 HO2 MYR sing 315 n n C2 C3 MYR sing 316 n n C2 H21 MYR sing 317 n n C2 H22 MYR sing 318 n n C3 C4 MYR sing 319 n n C3 H31 MYR sing 320 n n C3 H32 MYR sing 321 n n C4 C5 MYR sing 322 n n C4 H41 MYR sing 323 n n C4 H42 MYR sing 324 n n C5 C6 MYR sing 325 n n C5 H51 MYR sing 326 n n C5 H52 MYR sing 327 n n C6 C7 MYR sing 328 n n C6 H61 MYR sing 329 n n C6 H62 MYR sing 330 n n C7 C8 MYR sing 331 n n C7 H71 MYR sing 332 n n C7 H72 MYR sing 333 n n C8 C9 MYR sing 334 n n C8 H81 MYR sing 335 n n C8 H82 MYR sing 336 n n C9 C10 MYR sing 337 n n C9 H91 MYR sing 338 n n C9 H92 MYR sing 339 n n C10 C11 MYR sing 340 n n C10 H101 MYR sing 341 n n C10 H102 MYR sing 342 n n C11 C12 MYR sing 343 n n C11 H111 MYR sing 344 n n C11 H112 MYR sing 345 n n C12 C13 MYR sing 346 n n C12 H121 MYR sing 347 n n C12 H122 MYR sing 348 n n C13 C14 MYR sing 349 n n C13 H131 MYR sing 350 n n C13 H132 MYR sing 351 n n C14 H141 MYR sing 352 n n C14 H142 MYR sing 353 n n C14 H143 MYR sing 354 n n # _atom_sites.entry_id 8ITT _atom_sites.fract_transf_matrix[1][1] 0.010497 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00277 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.025996 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005668 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MYR A 1 601 1006 MYR MYR . D 2 MYR A 1 602 1002 MYR MYR . E 2 MYR A 1 603 1007 MYR MYR . F 3 LPC A 1 604 1001 LPC LPC . G 3 LPC A 1 605 1003 LPC LPC . H 3 LPC A 1 606 1005 LPC LPC . I 2 MYR B 1 601 1007 MYR MYR . J 2 MYR B 1 602 1002 MYR MYR . K 3 LPC B 1 603 1001 LPC LPC . L 3 LPC B 1 604 1003 LPC LPC . M 3 LPC B 1 605 1005 LPC LPC . N 2 MYR B 1 606 1006 MYR MYR . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 MYR . . . C 2 16.767 -10.453 64.29 1 68.55 ? C1 MYR 601 A 1 HETATM 2 O O1 MYR . . . C 2 16.231 -11.578 64.083 1 67.43 ? O1 MYR 601 A 1 HETATM 3 O O2 MYR . . . C 2 17.952 -10.331 64.719 1 64.81 ? O2 MYR 601 A 1 HETATM 4 C C2 MYR . . . C 2 15.949 -9.203 64.019 1 66.61 ? C2 MYR 601 A 1 HETATM 5 C C3 MYR . . . C 2 16.935 -8.063 63.76 1 62.56 ? C3 MYR 601 A 1 HETATM 6 C C4 MYR . . . C 2 16.292 -6.7 63.6 1 57.04 ? C4 MYR 601 A 1 HETATM 7 C C5 MYR . . . C 2 17.029 -5.947 62.498 1 54.79 ? C5 MYR 601 A 1 HETATM 8 C C6 MYR . . . C 2 18.448 -5.556 62.929 1 51.09 ? C6 MYR 601 A 1 HETATM 9 C C7 MYR . . . C 2 19.223 -4.99 61.756 1 48.85 ? C7 MYR 601 A 1 HETATM 10 C C8 MYR . . . C 2 20.72 -5.221 61.92 1 44.8 ? C8 MYR 601 A 1 HETATM 11 C C9 MYR . . . C 2 21.337 -4.126 62.779 1 44.74 ? C9 MYR 601 A 1 HETATM 12 C C10 MYR . . . C 2 22.042 -4.713 64.001 1 43.22 ? C10 MYR 601 A 1 HETATM 13 C C11 MYR . . . C 2 21.818 -3.825 65.221 1 40.86 ? C11 MYR 601 A 1 HETATM 14 C C12 MYR . . . C 2 22.903 -3.993 66.277 1 41.05 ? C12 MYR 601 A 1 HETATM 15 C C13 MYR . . . C 2 22.393 -3.552 67.64 1 43.08 ? C13 MYR 601 A 1 HETATM 16 C C14 MYR . . . C 2 23.53 -3.26 68.591 1 45.16 ? C14 MYR 601 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 16 #