data_8IU7 # _model_server_result.job_id XOY1U6ML8SSLP5T0ebsckQ _model_server_result.datetime_utc '2024-10-10 07:27:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8iu7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":402}' # _entry.id 8IU7 # _exptl.entry_id 8IU7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 91.37 _cell.angle_gamma 90 _cell.entry_id 8IU7 _cell.length_a 49.91 _cell.length_b 119.67 _cell.length_c 119.57 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8IU7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,F,M 1 1 D,K,L,P 1 3 B,G,H,N 2 1 C,I,J,O 2 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 1_455 x-1,y,z 1 0 0 0 1 0 0 0 1 -49.91 0 0 3 'crystal symmetry operation' 2_555 -x,y+1/2,-z -1 0 0 0 1 0 0 0 -1 0 59.835 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 47 A ASP 27 1_555 E MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.609 ? metalc ? metalc2 A OD2 ASP 47 A ASP 27 1_555 E MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.123 ? metalc ? metalc3 A OD2 ASP 49 A ASP 29 1_555 F MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.518 ? metalc ? metalc4 A OD2 ASP 103 A ASP 83 1_555 E MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? metalc ? metalc5 A OD1 ASP 103 A ASP 83 1_555 F MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.435 ? metalc ? metalc6 A OD2 ASP 103 A ASP 83 1_555 F MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.992 ? metalc ? metalc7 A OD2 ASP 178 A ASP 158 1_555 F MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? metalc ? metalc8 E MG MG . A MG 401 1_555 M O HOH . A HOH 536 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.862 ? metalc ? metalc9 F MG MG . A MG 402 1_555 M O HOH . A HOH 550 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.864 ? metalc ? metalc10 B OD1 ASP 47 C ASP 27 1_555 G MG MG . C MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.983 ? metalc ? metalc11 B OD2 ASP 47 C ASP 27 1_555 G MG MG . C MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.971 ? metalc ? metalc12 B OD2 ASP 49 C ASP 29 1_555 H MG MG . C MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.822 ? metalc ? metalc13 B OD2 ASP 103 C ASP 83 1_555 G MG MG . C MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? metalc ? metalc14 B OD1 ASP 103 C ASP 83 1_555 H MG MG . C MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.616 ? metalc ? metalc15 B OD1 ASP 178 C ASP 158 1_555 H MG MG . C MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.906 ? metalc ? metalc16 B OD2 ASP 178 C ASP 158 1_555 H MG MG . C MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.656 ? metalc ? metalc17 G MG MG . C MG 401 1_555 N O HOH . C HOH 526 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.217 ? metalc ? metalc18 C OD1 ASP 47 D ASP 27 1_555 I MG MG . D MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.591 ? metalc ? metalc19 C OD2 ASP 47 D ASP 27 1_555 I MG MG . D MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? metalc ? metalc20 C OD2 ASP 49 D ASP 29 1_555 J MG MG . D MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.808 ? metalc ? metalc21 C OD2 ASP 103 D ASP 83 1_555 I MG MG . D MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? metalc ? metalc22 C OD1 ASP 103 D ASP 83 1_555 J MG MG . D MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.951 ? metalc ? metalc23 C OD2 ASP 178 D ASP 158 1_555 J MG MG . D MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.445 ? metalc ? metalc24 D OD1 ASP 47 B ASP 27 1_555 L MG MG . B MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.171 ? metalc ? metalc25 D OD2 ASP 47 B ASP 27 1_555 L MG MG . B MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.235 ? metalc ? metalc26 D OD2 ASP 49 B ASP 29 1_555 K MG MG . B MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? metalc ? metalc27 D OD1 ASP 103 B ASP 83 1_555 K MG MG . B MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.224 ? metalc ? metalc28 D OD2 ASP 103 B ASP 83 1_555 K MG MG . B MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.814 ? metalc ? metalc29 D OD2 ASP 103 B ASP 83 1_555 L MG MG . B MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.863 ? metalc ? metalc30 D OD2 ASP 178 B ASP 158 1_555 K MG MG . B MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.655 ? metalc ? metalc31 K MG MG . B MG 401 1_555 P O HOH . B HOH 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.948 ? metalc ? metalc32 L MG MG . B MG 402 1_555 P O HOH . B HOH 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.841 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8IU7 _atom_sites.fract_transf_matrix[1][1] 0.020036 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000479 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008356 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008366 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 MG A 1 401 401 MG MG . F 2 MG A 1 402 402 MG MG . G 2 MG C 1 401 401 MG MG . H 2 MG C 1 402 402 MG MG . I 2 MG D 1 401 401 MG MG . J 2 MG D 1 402 402 MG MG . K 2 MG B 1 401 401 MG MG . L 2 MG B 1 402 402 MG MG . M 3 HOH A 1 501 61 HOH HOH . M 3 HOH A 2 502 52 HOH HOH . M 3 HOH A 3 503 57 HOH HOH . M 3 HOH A 4 504 2 HOH HOH . M 3 HOH A 5 505 151 HOH HOH . M 3 HOH A 6 506 105 HOH HOH . M 3 HOH A 7 507 62 HOH HOH . M 3 HOH A 8 508 11 HOH HOH . M 3 HOH A 9 509 152 HOH HOH . M 3 HOH A 10 510 8 HOH HOH . M 3 HOH A 11 511 113 HOH HOH . M 3 HOH A 12 512 30 HOH HOH . M 3 HOH A 13 513 36 HOH HOH . M 3 HOH A 14 514 54 HOH HOH . M 3 HOH A 15 515 128 HOH HOH . M 3 HOH A 16 516 21 HOH HOH . M 3 HOH A 17 517 56 HOH HOH . M 3 HOH A 18 518 20 HOH HOH . M 3 HOH A 19 519 119 HOH HOH . M 3 HOH A 20 520 31 HOH HOH . M 3 HOH A 21 521 23 HOH HOH . M 3 HOH A 22 522 110 HOH HOH . M 3 HOH A 23 523 22 HOH HOH . M 3 HOH A 24 524 73 HOH HOH . M 3 HOH A 25 525 124 HOH HOH . M 3 HOH A 26 526 118 HOH HOH . M 3 HOH A 27 527 1 HOH HOH . M 3 HOH A 28 528 148 HOH HOH . M 3 HOH A 29 529 12 HOH HOH . M 3 HOH A 30 530 40 HOH HOH . M 3 HOH A 31 531 10 HOH HOH . M 3 HOH A 32 532 80 HOH HOH . M 3 HOH A 33 533 101 HOH HOH . M 3 HOH A 34 534 150 HOH HOH . M 3 HOH A 35 535 71 HOH HOH . M 3 HOH A 36 536 19 HOH HOH . M 3 HOH A 37 537 136 HOH HOH . M 3 HOH A 38 538 116 HOH HOH . M 3 HOH A 39 539 75 HOH HOH . M 3 HOH A 40 540 134 HOH HOH . M 3 HOH A 41 541 76 HOH HOH . M 3 HOH A 42 542 77 HOH HOH . M 3 HOH A 43 543 154 HOH HOH . M 3 HOH A 44 544 162 HOH HOH . M 3 HOH A 45 545 155 HOH HOH . M 3 HOH A 46 546 74 HOH HOH . M 3 HOH A 47 547 138 HOH HOH . M 3 HOH A 48 548 84 HOH HOH . M 3 HOH A 49 549 88 HOH HOH . M 3 HOH A 50 550 37 HOH HOH . M 3 HOH A 51 551 142 HOH HOH . M 3 HOH A 52 552 147 HOH HOH . M 3 HOH A 53 553 123 HOH HOH . M 3 HOH A 54 554 130 HOH HOH . M 3 HOH A 55 555 157 HOH HOH . N 3 HOH C 1 501 139 HOH HOH . N 3 HOH C 2 502 46 HOH HOH . N 3 HOH C 3 503 87 HOH HOH . N 3 HOH C 4 504 13 HOH HOH . N 3 HOH C 5 505 99 HOH HOH . N 3 HOH C 6 506 121 HOH HOH . N 3 HOH C 7 507 66 HOH HOH . N 3 HOH C 8 508 108 HOH HOH . N 3 HOH C 9 509 104 HOH HOH . N 3 HOH C 10 510 50 HOH HOH . N 3 HOH C 11 511 132 HOH HOH . N 3 HOH C 12 512 33 HOH HOH . N 3 HOH C 13 513 65 HOH HOH . N 3 HOH C 14 514 17 HOH HOH . N 3 HOH C 15 515 79 HOH HOH . N 3 HOH C 16 516 16 HOH HOH . N 3 HOH C 17 517 35 HOH HOH . N 3 HOH C 18 518 59 HOH HOH . N 3 HOH C 19 519 96 HOH HOH . N 3 HOH C 20 520 106 HOH HOH . N 3 HOH C 21 521 81 HOH HOH . N 3 HOH C 22 522 83 HOH HOH . N 3 HOH C 23 523 27 HOH HOH . N 3 HOH C 24 524 141 HOH HOH . N 3 HOH C 25 525 133 HOH HOH . N 3 HOH C 26 526 7 HOH HOH . O 3 HOH D 1 501 18 HOH HOH . O 3 HOH D 2 502 6 HOH HOH . O 3 HOH D 3 503 44 HOH HOH . O 3 HOH D 4 504 102 HOH HOH . O 3 HOH D 5 505 69 HOH HOH . O 3 HOH D 6 506 149 HOH HOH . O 3 HOH D 7 507 109 HOH HOH . O 3 HOH D 8 508 38 HOH HOH . O 3 HOH D 9 509 67 HOH HOH . O 3 HOH D 10 510 51 HOH HOH . O 3 HOH D 11 511 32 HOH HOH . O 3 HOH D 12 512 70 HOH HOH . O 3 HOH D 13 513 24 HOH HOH . O 3 HOH D 14 514 89 HOH HOH . O 3 HOH D 15 515 117 HOH HOH . O 3 HOH D 16 516 85 HOH HOH . O 3 HOH D 17 517 114 HOH HOH . O 3 HOH D 18 518 135 HOH HOH . O 3 HOH D 19 519 129 HOH HOH . O 3 HOH D 20 520 55 HOH HOH . O 3 HOH D 21 521 153 HOH HOH . O 3 HOH D 22 522 145 HOH HOH . O 3 HOH D 23 523 120 HOH HOH . O 3 HOH D 24 524 92 HOH HOH . O 3 HOH D 25 525 161 HOH HOH . O 3 HOH D 26 526 160 HOH HOH . P 3 HOH B 1 501 42 HOH HOH . P 3 HOH B 2 502 72 HOH HOH . P 3 HOH B 3 503 39 HOH HOH . P 3 HOH B 4 504 41 HOH HOH . P 3 HOH B 5 505 107 HOH HOH . P 3 HOH B 6 506 5 HOH HOH . P 3 HOH B 7 507 28 HOH HOH . P 3 HOH B 8 508 3 HOH HOH . P 3 HOH B 9 509 15 HOH HOH . P 3 HOH B 10 510 45 HOH HOH . P 3 HOH B 11 511 14 HOH HOH . P 3 HOH B 12 512 60 HOH HOH . P 3 HOH B 13 513 115 HOH HOH . P 3 HOH B 14 514 43 HOH HOH . P 3 HOH B 15 515 9 HOH HOH . P 3 HOH B 16 516 49 HOH HOH . P 3 HOH B 17 517 100 HOH HOH . P 3 HOH B 18 518 63 HOH HOH . P 3 HOH B 19 519 131 HOH HOH . P 3 HOH B 20 520 82 HOH HOH . P 3 HOH B 21 521 125 HOH HOH . P 3 HOH B 22 522 64 HOH HOH . P 3 HOH B 23 523 29 HOH HOH . P 3 HOH B 24 524 93 HOH HOH . P 3 HOH B 25 525 90 HOH HOH . P 3 HOH B 26 526 48 HOH HOH . P 3 HOH B 27 527 53 HOH HOH . P 3 HOH B 28 528 112 HOH HOH . P 3 HOH B 29 529 4 HOH HOH . P 3 HOH B 30 530 86 HOH HOH . P 3 HOH B 31 531 26 HOH HOH . P 3 HOH B 32 532 103 HOH HOH . P 3 HOH B 33 533 158 HOH HOH . P 3 HOH B 34 534 98 HOH HOH . P 3 HOH B 35 535 144 HOH HOH . P 3 HOH B 36 536 78 HOH HOH . P 3 HOH B 37 537 68 HOH HOH . P 3 HOH B 38 538 127 HOH HOH . P 3 HOH B 39 539 137 HOH HOH . P 3 HOH B 40 540 111 HOH HOH . P 3 HOH B 41 541 25 HOH HOH . P 3 HOH B 42 542 58 HOH HOH . P 3 HOH B 43 543 34 HOH HOH . P 3 HOH B 44 544 140 HOH HOH . P 3 HOH B 45 545 156 HOH HOH . P 3 HOH B 46 546 146 HOH HOH . P 3 HOH B 47 547 47 HOH HOH . P 3 HOH B 48 548 126 HOH HOH . P 3 HOH B 49 549 97 HOH HOH . P 3 HOH B 50 550 122 HOH HOH . P 3 HOH B 51 551 91 HOH HOH . P 3 HOH B 52 552 94 HOH HOH . P 3 HOH B 53 553 159 HOH HOH . P 3 HOH B 54 554 143 HOH HOH . P 3 HOH B 55 555 95 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id L _atom_site.label_entity_id 2 _atom_site.Cartn_x 13.401 _atom_site.Cartn_y -29.769 _atom_site.Cartn_z -5.041 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 48.31 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 402 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 35 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 257 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #