data_8IUG # _model_server_result.job_id dFhUa3d1tP4jq57scj90ZQ _model_server_result.datetime_utc '2025-03-06 09:45:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8iug # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"VB","auth_seq_id":406}' # _entry.id 8IUG # _exptl.entry_id 8IUG _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 40.078 _entity.id 15 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8IUG _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8IUG _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details 37-meric _pdbx_struct_assembly.oligomeric_count 37 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB,MB,NB,OB,PB,QB,RB,SB,TB,UB,VB,WB,XB,YB,ZB,AC,BC,CC,DC,EC,FC,GC,HC,IC,JC,KC,LC,MC,NC,OC,PC,QC,RC,SC,TC,UC,VC,WC,XC,YC,ZC,AD,BD,CD,DD,ED,FD,GD,HD,ID,JD,KD,LD,MD,ND,OD,PD,QD,RD,SD,TD,UD,VD,WD,XD,YD,ZD,AE,BE,CE,DE,EE,FE,GE,HE,IE,JE,KE,LE,ME,NE,OE,PE,QE,RE,SE,TE,UE,VE,WE,XE,YE,ZE,AF,BF,CF,DF,EF,FF,GF,HF,IF,JF,KF,LF,MF,NF _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 15 _struct_asym.id VB _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 M SG CYS 118 C CYS 118 1_555 RB CAB HEC . C HEC 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.765 ? covale ? covale2 M SG CYS 121 C CYS 121 1_555 RB CAC HEC . C HEC 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.766 ? covale ? covale3 M SG CYS 171 C CYS 171 1_555 SB CAB HEC . C HEC 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.765 ? covale ? covale4 M SG CYS 174 C CYS 174 1_555 SB CAC HEC . C HEC 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.768 ? covale ? covale5 M SG CYS 240 C CYS 240 1_555 TB CAB HEC . C HEC 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.765 ? covale ? covale6 M SG CYS 243 C CYS 243 1_555 TB CAC HEC . C HEC 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.847 ? covale ? covale7 M SG CYS 293 C CYS 293 1_555 UB CAB HEC . C HEC 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.766 ? covale ? covale8 M SG CYS 296 C CYS 296 1_555 UB CAC HEC . C HEC 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.767 ? metalc ? metalc1 M NE2 HIS 122 C HIS 122 1_555 RB FE HEC . C HEC 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? metalc ? metalc2 M NE2 HIS 175 C HIS 175 1_555 SB FE HEC . C HEC 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.247 ? metalc ? metalc3 M O MET 190 C MET 190 1_555 VB CA CA . C CA 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.345 ? metalc ? metalc4 M O LEU 193 C LEU 193 1_555 VB CA CA . C CA 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.263 ? metalc ? metalc5 M OD1 ASN 195 C ASN 195 1_555 VB CA CA . C CA 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.346 ? metalc ? metalc6 M NE2 HIS 244 C HIS 244 1_555 TB FE HEC . C HEC 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? metalc ? metalc7 M NE2 HIS 297 C HIS 297 1_555 UB FE HEC . C HEC 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.138 ? metalc ? metalc8 VB CA CA . C CA 406 1_555 XB O14 PGV . C PGV 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.235 ? metalc ? metalc9 V NE2 HIS 229 L HIS 229 1_555 YD MN MN . M MN 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.159 ? metalc ? metalc10 V NE2 HIS 264 L HIS 264 1_555 YD MN MN . M MN 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.186 ? metalc ? metalc11 W NE2 HIS 542 M HIS 542 1_555 YD MN MN . M MN 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.161 ? metalc ? metalc12 W OE1 GLU 557 M GLU 557 1_555 YD MN MN . M MN 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.26 ? metalc ? metalc13 W OE2 GLU 557 M GLU 557 1_555 YD MN MN . M MN 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.203 ? metalc ? metalc14 W NE2 HIS 589 M HIS 589 1_555 YD MN MN . M MN 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.183 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8IUG _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code LA 9 BCL 0 1 101 101 BCL BCL . MA 9 BCL 0 1 102 102 BCL BCL . NA 10 U42 0 1 103 103 U42 KGF . OA 9 BCL 1 1 101 101 BCL BCL . PA 11 U4Z 1 1 102 104 U4Z GCX . QA 12 LMT 1 1 103 514 LMT LMT . RA 9 BCL 2 1 101 101 BCL BCL . SA 9 BCL 2 1 102 102 BCL BCL . TA 9 BCL 3 1 101 101 BCL BCL . UA 11 U4Z 3 1 102 104 U4Z GCX . VA 13 BGL 3 1 103 515 BGL BGL . WA 10 U42 4 1 101 103 U42 KGF . XA 9 BCL 4 1 102 101 BCL BCL . YA 9 BCL 4 1 103 102 BCL BCL . ZA 10 U42 4 1 104 103 U42 KGF . AB 9 BCL 5 1 101 101 BCL BCL . BB 11 U4Z 5 1 102 104 U4Z GCX . CB 9 BCL 6 1 101 101 BCL BCL . DB 9 BCL 6 1 102 102 BCL BCL . EB 9 BCL 7 1 101 101 BCL BCL . FB 11 U4Z 7 1 102 104 U4Z GCX . GB 10 U42 8 1 101 103 U42 KGF . HB 9 BCL 8 1 102 101 BCL BCL . IB 9 BCL 8 1 103 102 BCL BCL . JB 11 U4Z 9 1 101 104 U4Z GCX . KB 9 BCL 9 1 102 101 BCL BCL . LB 9 BCL A 1 101 101 BCL BCL . MB 11 U4Z A 1 102 104 U4Z GCX . NB 10 U42 B 1 101 103 U42 KGF . OB 9 BCL B 1 102 101 BCL BCL . PB 9 BCL B 1 103 102 BCL BCL . QB 11 U4Z C 1 401 102 U4Z GCX . RB 14 HEC C 1 402 501 HEC HEC . SB 14 HEC C 1 403 502 HEC HEC . TB 14 HEC C 1 404 503 HEC HEC . UB 14 HEC C 1 405 504 HEC HEC . VB 15 CA C 1 406 505 CA CA . WB 16 PGV C 1 407 2 PGV PGV . XB 16 PGV C 1 408 9 PGV PGV . YB 13 BGL C 1 409 16 BGL BGL . ZB 13 BGL C 1 410 21 BGL BGL . AC 17 UNL C 1 411 505 UNL UNL . BC 17 UNL C 1 412 506 UNL UNL . CC 9 BCL D 1 101 101 BCL BCL . DC 9 BCL D 1 102 101 BCL BCL . EC 11 U4Z D 1 103 104 U4Z GCX . FC 13 BGL D 1 104 19 BGL BGL . GC 12 LMT D 1 105 512 LMT LMT . HC 10 U42 E 1 101 103 U42 KGF . IC 9 BCL E 1 102 102 BCL BCL . JC 9 BCL F 1 101 101 BCL BCL . KC 9 BCL F 1 102 101 BCL BCL . LC 11 U4Z F 1 103 104 U4Z GCX . MC 13 BGL F 1 104 18 BGL BGL . NC 10 U42 G 1 101 103 U42 KGF . OC 9 BCL G 1 102 102 BCL BCL . PC 9 BCL H 1 101 101 BCL BCL . QC 11 U4Z H 1 102 104 U4Z GCX . RC 13 BGL H 1 103 17 BGL BGL . SC 17 UNL H 1 104 202 UNL UNL . TC 17 UNL H 1 105 203 UNL UNL . UC 17 UNL H 1 106 204 UNL UNL . VC 13 BGL H 1 107 207 BGL BGL . WC 17 UNL H 1 108 510 UNL UNL . XC 10 U42 I 1 101 103 U42 KGF . YC 9 BCL I 1 102 101 BCL BCL . ZC 9 BCL I 1 103 102 BCL BCL . AD 10 U42 I 1 104 103 U42 KGF . BD 9 BCL J 1 101 101 BCL BCL . CD 11 U4Z J 1 102 104 U4Z GCX . DD 9 BCL K 1 101 101 BCL BCL . ED 9 BCL K 1 102 102 BCL BCL . FD 9 BCL L 1 1001 1001 BCL BCL . GD 9 BCL L 1 1002 1002 BCL BCL . HD 18 BPH L 1 1003 1003 BPH BPH . ID 19 MQE L 1 1004 1004 MQE MQE . JD 18 BPH L 1 1005 704 BPH BPH . KD 16 PGV L 1 1006 1 PGV PGV . LD 16 PGV L 1 1007 6 PGV PGV . MD 16 PGV L 1 1008 8 PGV PGV . ND 17 UNL L 1 1009 10 UNL UNL . OD 17 UNL L 1 1010 11 UNL UNL . PD 13 BGL L 1 1011 14 BGL BGL . QD 13 BGL L 1 1012 15 BGL BGL . RD 13 BGL L 1 1013 23 BGL BGL . SD 17 UNL L 1 1014 24 UNL UNL . TD 13 BGL L 1 1015 516 BGL BGL . UD 17 UNL L 1 1016 518 UNL UNL . VD 20 PEF L 1 1017 1102 PEF PEF . WD 9 BCL M 1 701 702 BCL BCL . XD 18 BPH M 1 702 703 BPH BPH . YD 21 MN M 1 703 706 MN MN . ZD 19 MQE M 1 704 707 MQE MQE . AE 16 PGV M 1 705 3 PGV PGV . BE 16 PGV M 1 706 4 PGV PGV . CE 17 UNL M 1 707 507 UNL UNL . DE 9 BCL N 1 101 101 BCL BCL . EE 11 U4Z N 1 102 104 U4Z GCX . FE 13 BGL N 1 103 13 BGL BGL . GE 10 U42 O 1 101 103 U42 KGF . HE 9 BCL O 1 102 101 BCL BCL . IE 9 BCL O 1 103 102 BCL BCL . JE 9 BCL P 1 101 101 BCL BCL . KE 11 U4Z P 1 102 104 U4Z GCX . LE 16 PGV P 1 103 5 PGV PGV . ME 16 PGV P 1 104 7 PGV PGV . NE 10 U42 Q 1 101 103 U42 KGF . OE 9 BCL Q 1 102 101 BCL BCL . PE 9 BCL Q 1 103 102 BCL BCL . QE 9 BCL R 1 101 101 BCL BCL . RE 10 U42 S 1 101 103 U42 KGF . SE 9 BCL S 1 102 101 BCL BCL . TE 9 BCL S 1 103 102 BCL BCL . UE 11 U4Z S 1 104 104 U4Z GCX . VE 9 BCL T 1 101 101 BCL BCL . WE 11 U4Z T 1 102 104 U4Z GCX . XE 12 LMT T 1 103 513 LMT LMT . YE 10 U42 U 1 101 103 U42 KGF . ZE 9 BCL U 1 102 101 BCL BCL . AF 9 BCL U 1 103 102 BCL BCL . BF 10 U42 U 1 104 103 U42 KGF . CF 9 BCL V 1 101 101 BCL BCL . DF 11 U4Z V 1 102 104 U4Z GCX . EF 17 UNL V 1 103 508 UNL UNL . FF 17 UNL V 1 104 509 UNL UNL . GF 17 UNL V 1 105 517 UNL UNL . HF 9 BCL W 1 101 101 BCL BCL . IF 9 BCL W 1 102 102 BCL BCL . JF 13 BGL Y 1 101 20 BGL BGL . KF 17 UNL Y 1 102 22 UNL UNL . LF 22 LHG h 1 101 101 LHG LHG . MF 17 UNL h 1 102 205 UNL UNL . NF 17 UNL h 1 103 206 UNL UNL . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id VB _atom_site.label_entity_id 15 _atom_site.Cartn_x 179.243 _atom_site.Cartn_y 152.377 _atom_site.Cartn_z 139.592 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 36.06 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 406 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 342 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 39 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #