data_8IUM
#
_model_server_result.job_id            lOkDxvmBhoJlp1XnnadrBA 
_model_server_result.datetime_utc      '2024-12-26 16:48:13' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8ium 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":401}' 
#
_entry.id    8IUM 
#
_exptl.entry_id    8IUM 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              410.452 
_entity.id                          7 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(~{Z})-7-[(1~{R},2~{R},3~{R},5~{S})-2-[(~{E})-3,3-bis(fluoranyl)-4-phenoxy-but-1-enyl]-3,5-bis(oxidanyl)cyclopentyl]hept-5-enoic acid' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      7 
_struct_asym.id                             G 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 E SG CYS 44 N CYS 22 1_555 E SG CYS 118 N CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf2 E SG CYS 121 N CYS 99 1_555 E SG CYS 129 N CYS 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf3 F SG CYS 108 R CYS 108 1_555 F SG CYS 186 R CYS 186 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
#
_chem_comp.formula           'C22 H28 F2 O5' 
_chem_comp.formula_weight    410.452 
_chem_comp.id                S2F 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(~{Z})-7-[(1~{R},2~{R},3~{R},5~{S})-2-[(~{E})-3,3-bis(fluoranyl)-4-phenoxy-but-1-enyl]-3,5-bis(oxidanyl)cyclopentyl]hept-5-enoic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'Tafluprost acid' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O01 C02 S2F doub 275 n n 
C02 C04 S2F sing 276 n n 
C02 O03 S2F sing 277 n n 
C04 C05 S2F sing 278 n n 
C05 C06 S2F sing 279 n n 
C06 C07 S2F sing 280 n n 
C07 C08 S2F doub 281 z n 
C08 C09 S2F sing 282 n n 
C27 C26 S2F doub 283 n y 
C27 C28 S2F sing 284 n y 
C26 C25 S2F sing 285 n y 
C09 C10 S2F sing 286 n n 
O12 C11 S2F sing 287 n n 
C28 C29 S2F doub 288 n y 
C11 C10 S2F sing 289 n n 
C11 C13 S2F sing 290 n n 
C25 C24 S2F doub 291 n y 
C10 C16 S2F sing 292 n n 
C29 C24 S2F sing 293 n y 
C24 O23 S2F sing 294 n n 
C22 O23 S2F sing 295 n n 
C22 C19 S2F sing 296 n n 
C13 C14 S2F sing 297 n n 
C16 C17 S2F sing 298 n n 
C16 C14 S2F sing 299 n n 
F21 C19 S2F sing 300 n n 
C18 C17 S2F doub 301 e n 
C18 C19 S2F sing 302 n n 
C19 F20 S2F sing 303 n n 
C14 O15 S2F sing 304 n n 
C10 H1 S2F sing 305 n n 
C13 H2 S2F sing 306 n n 
C13 H3 S2F sing 307 n n 
C17 H4 S2F sing 308 n n 
C22 H6 S2F sing 309 n n 
C22 H7 S2F sing 310 n n 
C26 H8 S2F sing 311 n n 
C28 H9 S2F sing 312 n n 
O03 H10 S2F sing 313 n n 
C04 H11 S2F sing 314 n n 
C04 H12 S2F sing 315 n n 
C05 H13 S2F sing 316 n n 
C05 H14 S2F sing 317 n n 
C06 H15 S2F sing 318 n n 
C06 H16 S2F sing 319 n n 
C07 H17 S2F sing 320 n n 
C08 H19 S2F sing 321 n n 
C09 H21 S2F sing 322 n n 
C09 H22 S2F sing 323 n n 
C11 H23 S2F sing 324 n n 
O12 H24 S2F sing 325 n n 
C14 H25 S2F sing 326 n n 
O15 H26 S2F sing 327 n n 
C16 H27 S2F sing 328 n n 
C18 H28 S2F sing 329 n n 
C25 H30 S2F sing 330 n n 
C27 H31 S2F sing 331 n n 
C29 H32 S2F sing 332 n n 
#
_atom_sites.entry_id                     8IUM 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
_pdbx_nonpoly_scheme.asym_id          G 
_pdbx_nonpoly_scheme.entity_id        7 
_pdbx_nonpoly_scheme.mon_id           S2F 
_pdbx_nonpoly_scheme.pdb_strand_id    R 
_pdbx_nonpoly_scheme.ndb_seq_num      1 
_pdbx_nonpoly_scheme.pdb_seq_num      401 
_pdbx_nonpoly_scheme.auth_seq_num     401 
_pdbx_nonpoly_scheme.pdb_mon_id       S2F 
_pdbx_nonpoly_scheme.auth_mon_id      LIG 
_pdbx_nonpoly_scheme.pdb_ins_code     . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C10 S2F . . . G 7 113.345 97.828 81.444 1 20 ? C10 S2F 401 R 1 
HETATM 2 C C13 S2F . . . G 7 113.647 95.944 82.926 1 20 ? C13 S2F 401 R 1 
HETATM 3 C C17 S2F . . . G 7 112.963 99.416 83.286 1 20 ? C17 S2F 401 R 1 
HETATM 4 C C22 S2F . . . G 7 114.04 102.849 82.417 1 20 ? C22 S2F 401 R 1 
HETATM 5 C C24 S2F . . . G 7 114.815 104.992 82.07 1 20 ? C24 S2F 401 R 1 
HETATM 6 C C26 S2F . . . G 7 114.349 106.613 80.374 1 20 ? C26 S2F 401 R 1 
HETATM 7 C C28 S2F . . . G 7 116.614 105.98 80.868 1 20 ? C28 S2F 401 R 1 
HETATM 8 O O01 S2F . . . G 7 117.517 95.428 75.254 1 20 ? O01 S2F 401 R 1 
HETATM 9 C C02 S2F . . . G 7 117.236 95.971 76.361 1 20 ? C02 S2F 401 R 1 
HETATM 10 O O03 S2F . . . G 7 118.147 96.196 77.208 1 20 ? O03 S2F 401 R 1 
HETATM 11 C C04 S2F . . . G 7 115.775 96.365 76.683 1 20 ? C04 S2F 401 R 1 
HETATM 12 C C05 S2F . . . G 7 115.5 97.896 76.735 1 20 ? C05 S2F 401 R 1 
HETATM 13 C C06 S2F . . . G 7 115.233 98.417 78.181 1 20 ? C06 S2F 401 R 1 
HETATM 14 C C07 S2F . . . G 7 113.93 99.256 78.331 1 20 ? C07 S2F 401 R 1 
HETATM 15 C C08 S2F . . . G 7 113.407 99.375 79.572 1 20 ? C08 S2F 401 R 1 
HETATM 16 C C09 S2F . . . G 7 114.349 98.561 80.482 1 20 ? C09 S2F 401 R 1 
HETATM 17 C C11 S2F . . . G 7 113.498 96.513 81.345 1 20 ? C11 S2F 401 R 1 
HETATM 18 O O12 S2F . . . G 7 114.67 96.183 80.638 1 20 ? O12 S2F 401 R 1 
HETATM 19 C C14 S2F . . . G 7 113.127 96.909 83.718 1 20 ? C14 S2F 401 R 1 
HETATM 20 O O15 S2F . . . G 7 113.677 96.84 85.055 1 20 ? O15 S2F 401 R 1 
HETATM 21 C C16 S2F . . . G 7 113.641 98.211 82.976 1 20 ? C16 S2F 401 R 1 
HETATM 22 C C18 S2F . . . G 7 113.698 100.528 83.133 1 20 ? C18 S2F 401 R 1 
HETATM 23 C C19 S2F . . . G 7 113.201 101.964 83.358 1 20 ? C19 S2F 401 R 1 
HETATM 24 O O23 S2F . . . G 7 114.318 104.099 83.021 1 20 ? O23 S2F 401 R 1 
HETATM 25 C C25 S2F . . . G 7 113.914 105.739 81.35 1 20 ? C25 S2F 401 R 1 
HETATM 26 C C27 S2F . . . G 7 115.695 106.689 80.118 1 20 ? C27 S2F 401 R 1 
HETATM 27 C C29 S2F . . . G 7 116.167 105.1 81.837 1 20 ? C29 S2F 401 R 1 
HETATM 28 F F20 S2F . . . G 7 113.43 102.345 84.651 1 20 ? F20 S2F 401 R 1 
HETATM 29 F F21 S2F . . . G 7 111.869 102.067 83.053 1 20 ? F21 S2F 401 R 1 
#
_model_server_stats.io_time_ms              67 
_model_server_stats.parse_time_ms           24 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           432 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           29 
#