data_8IWQ # _model_server_result.job_id QBQf-3z6AwOdbIVrLgGRYQ _model_server_result.datetime_utc '2024-12-14 21:59:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8iwq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":401}' # _entry.id 8IWQ # _exptl.entry_id 8IWQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 99.46 _cell.angle_gamma 90 _cell.entry_id 8IWQ _cell.length_a 66.849 _cell.length_b 47.497 _cell.length_c 96.265 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8IWQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression B,D,E,G 1 1 A,C,F 1 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_544 -x,y-1/2,-z-1 -1 0 0 0 1 0 0 0 -1 15.82202 -23.7485 -94.955852 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 8IWQ _atom_sites.fract_transf_matrix[1][1] 0.014959 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002493 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021054 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010531 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL B 1 401 401 GOL GOL . D 2 GOL A 1 401 401 GOL GOL . E 2 GOL A 1 402 501 GOL GOL . F 3 HOH B 1 501 38 HOH HOH . F 3 HOH B 2 502 142 HOH HOH . F 3 HOH B 3 503 97 HOH HOH . F 3 HOH B 4 504 16 HOH HOH . F 3 HOH B 5 505 133 HOH HOH . F 3 HOH B 6 506 116 HOH HOH . F 3 HOH B 7 507 151 HOH HOH . F 3 HOH B 8 508 28 HOH HOH . F 3 HOH B 9 509 55 HOH HOH . F 3 HOH B 10 510 41 HOH HOH . F 3 HOH B 11 511 147 HOH HOH . F 3 HOH B 12 512 111 HOH HOH . F 3 HOH B 13 513 37 HOH HOH . F 3 HOH B 14 514 185 HOH HOH . F 3 HOH B 15 515 56 HOH HOH . F 3 HOH B 16 516 12 HOH HOH . F 3 HOH B 17 517 138 HOH HOH . F 3 HOH B 18 518 58 HOH HOH . F 3 HOH B 19 519 36 HOH HOH . F 3 HOH B 20 520 54 HOH HOH . F 3 HOH B 21 521 57 HOH HOH . F 3 HOH B 22 522 52 HOH HOH . F 3 HOH B 23 523 6 HOH HOH . F 3 HOH B 24 524 1 HOH HOH . F 3 HOH B 25 525 27 HOH HOH . F 3 HOH B 26 526 31 HOH HOH . F 3 HOH B 27 527 154 HOH HOH . F 3 HOH B 28 528 39 HOH HOH . F 3 HOH B 29 529 132 HOH HOH . F 3 HOH B 30 530 118 HOH HOH . F 3 HOH B 31 531 3 HOH HOH . F 3 HOH B 32 532 40 HOH HOH . F 3 HOH B 33 533 109 HOH HOH . F 3 HOH B 34 534 2 HOH HOH . F 3 HOH B 35 535 43 HOH HOH . F 3 HOH B 36 536 25 HOH HOH . F 3 HOH B 37 537 149 HOH HOH . F 3 HOH B 38 538 42 HOH HOH . F 3 HOH B 39 539 168 HOH HOH . F 3 HOH B 40 540 94 HOH HOH . F 3 HOH B 41 541 173 HOH HOH . F 3 HOH B 42 542 46 HOH HOH . F 3 HOH B 43 543 34 HOH HOH . F 3 HOH B 44 544 140 HOH HOH . F 3 HOH B 45 545 108 HOH HOH . F 3 HOH B 46 546 177 HOH HOH . F 3 HOH B 47 547 143 HOH HOH . F 3 HOH B 48 548 178 HOH HOH . F 3 HOH B 49 549 117 HOH HOH . F 3 HOH B 50 550 191 HOH HOH . F 3 HOH B 51 551 180 HOH HOH . F 3 HOH B 52 552 11 HOH HOH . F 3 HOH B 53 553 172 HOH HOH . F 3 HOH B 54 554 45 HOH HOH . F 3 HOH B 55 555 167 HOH HOH . F 3 HOH B 56 556 135 HOH HOH . F 3 HOH B 57 557 44 HOH HOH . F 3 HOH B 58 558 96 HOH HOH . F 3 HOH B 59 559 103 HOH HOH . F 3 HOH B 60 560 49 HOH HOH . F 3 HOH B 61 561 186 HOH HOH . F 3 HOH B 62 562 47 HOH HOH . F 3 HOH B 63 563 136 HOH HOH . F 3 HOH B 64 564 119 HOH HOH . F 3 HOH B 65 565 134 HOH HOH . F 3 HOH B 66 566 176 HOH HOH . F 3 HOH B 67 567 170 HOH HOH . F 3 HOH B 68 568 181 HOH HOH . F 3 HOH B 69 569 101 HOH HOH . F 3 HOH B 70 570 18 HOH HOH . F 3 HOH B 71 571 17 HOH HOH . F 3 HOH B 72 572 139 HOH HOH . F 3 HOH B 73 573 171 HOH HOH . F 3 HOH B 74 574 7 HOH HOH . F 3 HOH B 75 575 179 HOH HOH . F 3 HOH B 76 576 98 HOH HOH . F 3 HOH B 77 577 26 HOH HOH . F 3 HOH B 78 578 13 HOH HOH . F 3 HOH B 79 579 182 HOH HOH . F 3 HOH B 80 580 53 HOH HOH . F 3 HOH B 81 581 33 HOH HOH . F 3 HOH B 82 582 175 HOH HOH . F 3 HOH B 83 583 8 HOH HOH . F 3 HOH B 84 584 145 HOH HOH . F 3 HOH B 85 585 50 HOH HOH . F 3 HOH B 86 586 107 HOH HOH . F 3 HOH B 87 587 5 HOH HOH . F 3 HOH B 88 588 112 HOH HOH . F 3 HOH B 89 589 10 HOH HOH . F 3 HOH B 90 590 174 HOH HOH . F 3 HOH B 91 591 148 HOH HOH . F 3 HOH B 92 592 19 HOH HOH . F 3 HOH B 93 593 120 HOH HOH . F 3 HOH B 94 594 131 HOH HOH . F 3 HOH B 95 595 152 HOH HOH . F 3 HOH B 96 596 150 HOH HOH . F 3 HOH B 97 597 48 HOH HOH . F 3 HOH B 98 598 129 HOH HOH . F 3 HOH B 99 599 130 HOH HOH . F 3 HOH B 100 600 110 HOH HOH . F 3 HOH B 101 601 146 HOH HOH . F 3 HOH B 102 602 144 HOH HOH . F 3 HOH B 103 603 141 HOH HOH . F 3 HOH B 104 604 102 HOH HOH . F 3 HOH B 105 605 169 HOH HOH . F 3 HOH B 106 606 9 HOH HOH . F 3 HOH B 107 607 15 HOH HOH . F 3 HOH B 108 608 137 HOH HOH . F 3 HOH B 109 609 51 HOH HOH . F 3 HOH B 110 610 153 HOH HOH . G 3 HOH A 1 501 64 HOH HOH . G 3 HOH A 2 502 82 HOH HOH . G 3 HOH A 3 503 125 HOH HOH . G 3 HOH A 4 504 63 HOH HOH . G 3 HOH A 5 505 22 HOH HOH . G 3 HOH A 6 506 114 HOH HOH . G 3 HOH A 7 507 81 HOH HOH . G 3 HOH A 8 508 188 HOH HOH . G 3 HOH A 9 509 72 HOH HOH . G 3 HOH A 10 510 193 HOH HOH . G 3 HOH A 11 511 104 HOH HOH . G 3 HOH A 12 512 115 HOH HOH . G 3 HOH A 13 513 62 HOH HOH . G 3 HOH A 14 514 100 HOH HOH . G 3 HOH A 15 515 61 HOH HOH . G 3 HOH A 16 516 197 HOH HOH . G 3 HOH A 17 517 77 HOH HOH . G 3 HOH A 18 518 164 HOH HOH . G 3 HOH A 19 519 192 HOH HOH . G 3 HOH A 20 520 70 HOH HOH . G 3 HOH A 21 521 29 HOH HOH . G 3 HOH A 22 522 68 HOH HOH . G 3 HOH A 23 523 93 HOH HOH . G 3 HOH A 24 524 20 HOH HOH . G 3 HOH A 25 525 159 HOH HOH . G 3 HOH A 26 526 30 HOH HOH . G 3 HOH A 27 527 106 HOH HOH . G 3 HOH A 28 528 65 HOH HOH . G 3 HOH A 29 529 124 HOH HOH . G 3 HOH A 30 530 184 HOH HOH . G 3 HOH A 31 531 161 HOH HOH . G 3 HOH A 32 532 83 HOH HOH . G 3 HOH A 33 533 78 HOH HOH . G 3 HOH A 34 534 35 HOH HOH . G 3 HOH A 35 535 85 HOH HOH . G 3 HOH A 36 536 196 HOH HOH . G 3 HOH A 37 537 183 HOH HOH . G 3 HOH A 38 538 66 HOH HOH . G 3 HOH A 39 539 187 HOH HOH . G 3 HOH A 40 540 79 HOH HOH . G 3 HOH A 41 541 105 HOH HOH . G 3 HOH A 42 542 91 HOH HOH . G 3 HOH A 43 543 32 HOH HOH . G 3 HOH A 44 544 92 HOH HOH . G 3 HOH A 45 545 163 HOH HOH . G 3 HOH A 46 546 158 HOH HOH . G 3 HOH A 47 547 195 HOH HOH . G 3 HOH A 48 548 157 HOH HOH . G 3 HOH A 49 549 84 HOH HOH . G 3 HOH A 50 550 69 HOH HOH . G 3 HOH A 51 551 73 HOH HOH . G 3 HOH A 52 552 126 HOH HOH . G 3 HOH A 53 553 198 HOH HOH . G 3 HOH A 54 554 155 HOH HOH . G 3 HOH A 55 555 60 HOH HOH . G 3 HOH A 56 556 87 HOH HOH . G 3 HOH A 57 557 59 HOH HOH . G 3 HOH A 58 558 14 HOH HOH . G 3 HOH A 59 559 156 HOH HOH . G 3 HOH A 60 560 127 HOH HOH . G 3 HOH A 61 561 166 HOH HOH . G 3 HOH A 62 562 23 HOH HOH . G 3 HOH A 63 563 190 HOH HOH . G 3 HOH A 64 564 162 HOH HOH . G 3 HOH A 65 565 21 HOH HOH . G 3 HOH A 66 566 86 HOH HOH . G 3 HOH A 67 567 75 HOH HOH . G 3 HOH A 68 568 121 HOH HOH . G 3 HOH A 69 569 113 HOH HOH . G 3 HOH A 70 570 189 HOH HOH . G 3 HOH A 71 571 122 HOH HOH . G 3 HOH A 72 572 90 HOH HOH . G 3 HOH A 73 573 89 HOH HOH . G 3 HOH A 74 574 88 HOH HOH . G 3 HOH A 75 575 67 HOH HOH . G 3 HOH A 76 576 80 HOH HOH . G 3 HOH A 77 577 76 HOH HOH . G 3 HOH A 78 578 71 HOH HOH . G 3 HOH A 79 579 160 HOH HOH . G 3 HOH A 80 580 165 HOH HOH . G 3 HOH A 81 581 123 HOH HOH . G 3 HOH A 82 582 194 HOH HOH . G 3 HOH A 83 583 128 HOH HOH . G 3 HOH A 84 584 74 HOH HOH . G 3 HOH A 85 585 95 HOH HOH . G 3 HOH A 86 586 199 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . D 2 21.908 -11.138 -27.841 1 41.63 ? C1 GOL 401 A 1 HETATM 2 O O1 GOL . . . D 2 22.512 -10.939 -29.079 1 41.37 ? O1 GOL 401 A 1 HETATM 3 C C2 GOL . . . D 2 21.075 -12.429 -27.943 1 41.49 ? C2 GOL 401 A 1 HETATM 4 O O2 GOL . . . D 2 21.54 -13.415 -27.091 1 41.19 ? O2 GOL 401 A 1 HETATM 5 C C3 GOL . . . D 2 19.62 -12.005 -27.621 1 43.01 ? C3 GOL 401 A 1 HETATM 6 O O3 GOL . . . D 2 19.264 -12.647 -26.435 1 42.24 ? O3 GOL 401 A 1 # _model_server_stats.io_time_ms 74 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 309 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 6 #