data_8IXW # _model_server_result.job_id o_HlwUxxB1ooWsV_PDy6vA _model_server_result.datetime_utc '2024-11-13 05:59:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ixw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":201}' # _entry.id 8IXW # _exptl.entry_id 8IXW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 123.016 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description selenourea _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 106.865 _cell.angle_beta 108.918 _cell.angle_gamma 108.022 _cell.entry_id 8IXW _cell.length_a 50.486 _cell.length_b 51.342 _cell.length_c 52.706 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8IXW _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall 'P 1' _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # _chem_comp.formula 'C H4 N2 Se' _chem_comp.formula_weight 123.016 _chem_comp.id SEY _chem_comp.mon_nstd_flag . _chem_comp.name selenourea _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag SE C SEY doub 290 n n N2 C SEY sing 291 n n C N1 SEY sing 292 n n N2 H2 SEY sing 293 n n N1 H3 SEY sing 294 n n N1 H4 SEY sing 295 n n N2 H1 SEY sing 296 n n # _atom_sites.entry_id 8IXW _atom_sites.fract_transf_matrix[1][1] 0.019807 _atom_sites.fract_transf_matrix[1][2] 0.006444 _atom_sites.fract_transf_matrix[1][3] 0.01064 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020482 _atom_sites.fract_transf_matrix[2][3] 0.009867 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022263 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SEY A 1 201 1 SEY SEY . D 2 SEY A 1 202 3 SEY SEY . E 2 SEY A 1 203 4 SEY SEY . F 2 SEY A 1 204 5 SEY SEY . G 2 SEY B 1 201 2 SEY SEY . H 2 SEY B 1 202 6 SEY SEY . I 3 HOH A 1 301 277 HOH HOH . I 3 HOH A 2 302 323 HOH HOH . I 3 HOH A 3 303 86 HOH HOH . I 3 HOH A 4 304 94 HOH HOH . I 3 HOH A 5 305 241 HOH HOH . I 3 HOH A 6 306 73 HOH HOH . I 3 HOH A 7 307 188 HOH HOH . I 3 HOH A 8 308 201 HOH HOH . I 3 HOH A 9 309 25 HOH HOH . I 3 HOH A 10 310 106 HOH HOH . I 3 HOH A 11 311 127 HOH HOH . I 3 HOH A 12 312 327 HOH HOH . I 3 HOH A 13 313 228 HOH HOH . I 3 HOH A 14 314 269 HOH HOH . I 3 HOH A 15 315 66 HOH HOH . I 3 HOH A 16 316 17 HOH HOH . I 3 HOH A 17 317 148 HOH HOH . I 3 HOH A 18 318 245 HOH HOH . I 3 HOH A 19 319 267 HOH HOH . I 3 HOH A 20 320 49 HOH HOH . I 3 HOH A 21 321 35 HOH HOH . I 3 HOH A 22 322 103 HOH HOH . I 3 HOH A 23 323 116 HOH HOH . I 3 HOH A 24 324 123 HOH HOH . I 3 HOH A 25 325 13 HOH HOH . I 3 HOH A 26 326 176 HOH HOH . I 3 HOH A 27 327 34 HOH HOH . I 3 HOH A 28 328 38 HOH HOH . I 3 HOH A 29 329 50 HOH HOH . I 3 HOH A 30 330 124 HOH HOH . I 3 HOH A 31 331 135 HOH HOH . I 3 HOH A 32 332 132 HOH HOH . I 3 HOH A 33 333 254 HOH HOH . I 3 HOH A 34 334 72 HOH HOH . I 3 HOH A 35 335 2 HOH HOH . I 3 HOH A 36 336 121 HOH HOH . I 3 HOH A 37 337 158 HOH HOH . I 3 HOH A 38 338 206 HOH HOH . I 3 HOH A 39 339 230 HOH HOH . I 3 HOH A 40 340 247 HOH HOH . I 3 HOH A 41 341 65 HOH HOH . I 3 HOH A 42 342 260 HOH HOH . I 3 HOH A 43 343 209 HOH HOH . I 3 HOH A 44 344 61 HOH HOH . I 3 HOH A 45 345 249 HOH HOH . I 3 HOH A 46 346 186 HOH HOH . I 3 HOH A 47 347 69 HOH HOH . I 3 HOH A 48 348 129 HOH HOH . I 3 HOH A 49 349 51 HOH HOH . I 3 HOH A 50 350 263 HOH HOH . I 3 HOH A 51 351 99 HOH HOH . I 3 HOH A 52 352 11 HOH HOH . I 3 HOH A 53 353 113 HOH HOH . I 3 HOH A 54 354 152 HOH HOH . I 3 HOH A 55 355 44 HOH HOH . I 3 HOH A 56 356 140 HOH HOH . I 3 HOH A 57 357 96 HOH HOH . I 3 HOH A 58 358 91 HOH HOH . I 3 HOH A 59 359 250 HOH HOH . I 3 HOH A 60 360 76 HOH HOH . I 3 HOH A 61 361 7 HOH HOH . I 3 HOH A 62 362 42 HOH HOH . I 3 HOH A 63 363 274 HOH HOH . I 3 HOH A 64 364 60 HOH HOH . I 3 HOH A 65 365 229 HOH HOH . I 3 HOH A 66 366 32 HOH HOH . I 3 HOH A 67 367 4 HOH HOH . I 3 HOH A 68 368 180 HOH HOH . I 3 HOH A 69 369 48 HOH HOH . I 3 HOH A 70 370 37 HOH HOH . I 3 HOH A 71 371 217 HOH HOH . I 3 HOH A 72 372 146 HOH HOH . I 3 HOH A 73 373 81 HOH HOH . I 3 HOH A 74 374 304 HOH HOH . I 3 HOH A 75 375 256 HOH HOH . I 3 HOH A 76 376 117 HOH HOH . I 3 HOH A 77 377 291 HOH HOH . I 3 HOH A 78 378 150 HOH HOH . I 3 HOH A 79 379 311 HOH HOH . I 3 HOH A 80 380 59 HOH HOH . I 3 HOH A 81 381 120 HOH HOH . I 3 HOH A 82 382 45 HOH HOH . I 3 HOH A 83 383 270 HOH HOH . I 3 HOH A 84 384 286 HOH HOH . I 3 HOH A 85 385 199 HOH HOH . I 3 HOH A 86 386 177 HOH HOH . I 3 HOH A 87 387 52 HOH HOH . I 3 HOH A 88 388 119 HOH HOH . I 3 HOH A 89 389 343 HOH HOH . I 3 HOH A 90 390 53 HOH HOH . I 3 HOH A 91 391 115 HOH HOH . I 3 HOH A 92 392 309 HOH HOH . I 3 HOH A 93 393 298 HOH HOH . I 3 HOH A 94 394 287 HOH HOH . I 3 HOH A 95 395 216 HOH HOH . I 3 HOH A 96 396 130 HOH HOH . I 3 HOH A 97 397 308 HOH HOH . I 3 HOH A 98 398 111 HOH HOH . I 3 HOH A 99 399 166 HOH HOH . I 3 HOH A 100 400 235 HOH HOH . I 3 HOH A 101 401 57 HOH HOH . I 3 HOH A 102 402 62 HOH HOH . I 3 HOH A 103 403 290 HOH HOH . I 3 HOH A 104 404 149 HOH HOH . I 3 HOH A 105 405 318 HOH HOH . I 3 HOH A 106 406 319 HOH HOH . I 3 HOH A 107 407 147 HOH HOH . I 3 HOH A 108 408 102 HOH HOH . I 3 HOH A 109 409 128 HOH HOH . I 3 HOH A 110 410 289 HOH HOH . I 3 HOH A 111 411 243 HOH HOH . I 3 HOH A 112 412 74 HOH HOH . I 3 HOH A 113 413 214 HOH HOH . I 3 HOH A 114 414 268 HOH HOH . I 3 HOH A 115 415 314 HOH HOH . I 3 HOH A 116 416 264 HOH HOH . I 3 HOH A 117 417 307 HOH HOH . I 3 HOH A 118 418 215 HOH HOH . I 3 HOH A 119 419 282 HOH HOH . I 3 HOH A 120 420 240 HOH HOH . I 3 HOH A 121 421 233 HOH HOH . I 3 HOH A 122 422 40 HOH HOH . I 3 HOH A 123 423 275 HOH HOH . I 3 HOH A 124 424 219 HOH HOH . I 3 HOH A 125 425 218 HOH HOH . I 3 HOH A 126 426 98 HOH HOH . I 3 HOH A 127 427 208 HOH HOH . I 3 HOH A 128 428 89 HOH HOH . I 3 HOH A 129 429 170 HOH HOH . I 3 HOH A 130 430 157 HOH HOH . I 3 HOH A 131 431 101 HOH HOH . I 3 HOH A 132 432 164 HOH HOH . I 3 HOH A 133 433 211 HOH HOH . I 3 HOH A 134 434 173 HOH HOH . I 3 HOH A 135 435 196 HOH HOH . I 3 HOH A 136 436 109 HOH HOH . I 3 HOH A 137 437 301 HOH HOH . I 3 HOH A 138 438 144 HOH HOH . I 3 HOH A 139 439 278 HOH HOH . I 3 HOH A 140 440 155 HOH HOH . I 3 HOH A 141 441 251 HOH HOH . I 3 HOH A 142 442 227 HOH HOH . I 3 HOH A 143 443 194 HOH HOH . J 3 HOH B 1 301 204 HOH HOH . J 3 HOH B 2 302 198 HOH HOH . J 3 HOH B 3 303 259 HOH HOH . J 3 HOH B 4 304 68 HOH HOH . J 3 HOH B 5 305 24 HOH HOH . J 3 HOH B 6 306 110 HOH HOH . J 3 HOH B 7 307 165 HOH HOH . J 3 HOH B 8 308 46 HOH HOH . J 3 HOH B 9 309 192 HOH HOH . J 3 HOH B 10 310 222 HOH HOH . J 3 HOH B 11 311 20 HOH HOH . J 3 HOH B 12 312 83 HOH HOH . J 3 HOH B 13 313 332 HOH HOH . J 3 HOH B 14 314 79 HOH HOH . J 3 HOH B 15 315 279 HOH HOH . J 3 HOH B 16 316 55 HOH HOH . J 3 HOH B 17 317 203 HOH HOH . J 3 HOH B 18 318 97 HOH HOH . J 3 HOH B 19 319 6 HOH HOH . J 3 HOH B 20 320 145 HOH HOH . J 3 HOH B 21 321 226 HOH HOH . J 3 HOH B 22 322 210 HOH HOH . J 3 HOH B 23 323 189 HOH HOH . J 3 HOH B 24 324 159 HOH HOH . J 3 HOH B 25 325 154 HOH HOH . J 3 HOH B 26 326 23 HOH HOH . J 3 HOH B 27 327 9 HOH HOH . J 3 HOH B 28 328 236 HOH HOH . J 3 HOH B 29 329 43 HOH HOH . J 3 HOH B 30 330 88 HOH HOH . J 3 HOH B 31 331 1 HOH HOH . J 3 HOH B 32 332 220 HOH HOH . J 3 HOH B 33 333 77 HOH HOH . J 3 HOH B 34 334 8 HOH HOH . J 3 HOH B 35 335 200 HOH HOH . J 3 HOH B 36 336 28 HOH HOH . J 3 HOH B 37 337 108 HOH HOH . J 3 HOH B 38 338 92 HOH HOH . J 3 HOH B 39 339 16 HOH HOH . J 3 HOH B 40 340 67 HOH HOH . J 3 HOH B 41 341 56 HOH HOH . J 3 HOH B 42 342 107 HOH HOH . J 3 HOH B 43 343 12 HOH HOH . J 3 HOH B 44 344 187 HOH HOH . J 3 HOH B 45 345 266 HOH HOH . J 3 HOH B 46 346 26 HOH HOH . J 3 HOH B 47 347 93 HOH HOH . J 3 HOH B 48 348 22 HOH HOH . J 3 HOH B 49 349 100 HOH HOH . J 3 HOH B 50 350 3 HOH HOH . J 3 HOH B 51 351 78 HOH HOH . J 3 HOH B 52 352 5 HOH HOH . J 3 HOH B 53 353 18 HOH HOH . J 3 HOH B 54 354 190 HOH HOH . J 3 HOH B 55 355 191 HOH HOH . J 3 HOH B 56 356 160 HOH HOH . J 3 HOH B 57 357 71 HOH HOH . J 3 HOH B 58 358 156 HOH HOH . J 3 HOH B 59 359 63 HOH HOH . J 3 HOH B 60 360 338 HOH HOH . J 3 HOH B 61 361 19 HOH HOH . J 3 HOH B 62 362 246 HOH HOH . J 3 HOH B 63 363 153 HOH HOH . J 3 HOH B 64 364 75 HOH HOH . J 3 HOH B 65 365 82 HOH HOH . J 3 HOH B 66 366 162 HOH HOH . J 3 HOH B 67 367 137 HOH HOH . J 3 HOH B 68 368 30 HOH HOH . J 3 HOH B 69 369 95 HOH HOH . J 3 HOH B 70 370 252 HOH HOH . J 3 HOH B 71 371 253 HOH HOH . J 3 HOH B 72 372 36 HOH HOH . J 3 HOH B 73 373 114 HOH HOH . J 3 HOH B 74 374 39 HOH HOH . J 3 HOH B 75 375 317 HOH HOH . J 3 HOH B 76 376 58 HOH HOH . J 3 HOH B 77 377 133 HOH HOH . J 3 HOH B 78 378 15 HOH HOH . J 3 HOH B 79 379 21 HOH HOH . J 3 HOH B 80 380 255 HOH HOH . J 3 HOH B 81 381 87 HOH HOH . J 3 HOH B 82 382 283 HOH HOH . J 3 HOH B 83 383 126 HOH HOH . J 3 HOH B 84 384 33 HOH HOH . J 3 HOH B 85 385 29 HOH HOH . J 3 HOH B 86 386 178 HOH HOH . J 3 HOH B 87 387 281 HOH HOH . J 3 HOH B 88 388 27 HOH HOH . J 3 HOH B 89 389 70 HOH HOH . J 3 HOH B 90 390 179 HOH HOH . J 3 HOH B 91 391 41 HOH HOH . J 3 HOH B 92 392 104 HOH HOH . J 3 HOH B 93 393 31 HOH HOH . J 3 HOH B 94 394 54 HOH HOH . J 3 HOH B 95 395 138 HOH HOH . J 3 HOH B 96 396 248 HOH HOH . J 3 HOH B 97 397 47 HOH HOH . J 3 HOH B 98 398 64 HOH HOH . J 3 HOH B 99 399 172 HOH HOH . J 3 HOH B 100 400 134 HOH HOH . J 3 HOH B 101 401 185 HOH HOH . J 3 HOH B 102 402 193 HOH HOH . J 3 HOH B 103 403 143 HOH HOH . J 3 HOH B 104 404 118 HOH HOH . J 3 HOH B 105 405 294 HOH HOH . J 3 HOH B 106 406 80 HOH HOH . J 3 HOH B 107 407 14 HOH HOH . J 3 HOH B 108 408 171 HOH HOH . J 3 HOH B 109 409 300 HOH HOH . J 3 HOH B 110 410 112 HOH HOH . J 3 HOH B 111 411 321 HOH HOH . J 3 HOH B 112 412 139 HOH HOH . J 3 HOH B 113 413 313 HOH HOH . J 3 HOH B 114 414 167 HOH HOH . J 3 HOH B 115 415 197 HOH HOH . J 3 HOH B 116 416 273 HOH HOH . J 3 HOH B 117 417 324 HOH HOH . J 3 HOH B 118 418 174 HOH HOH . J 3 HOH B 119 419 141 HOH HOH . J 3 HOH B 120 420 285 HOH HOH . J 3 HOH B 121 421 202 HOH HOH . J 3 HOH B 122 422 207 HOH HOH . J 3 HOH B 123 423 105 HOH HOH . J 3 HOH B 124 424 331 HOH HOH . J 3 HOH B 125 425 131 HOH HOH . J 3 HOH B 126 426 261 HOH HOH . J 3 HOH B 127 427 297 HOH HOH . J 3 HOH B 128 428 184 HOH HOH . J 3 HOH B 129 429 182 HOH HOH . J 3 HOH B 130 430 90 HOH HOH . J 3 HOH B 131 431 344 HOH HOH . J 3 HOH B 132 432 328 HOH HOH . J 3 HOH B 133 433 169 HOH HOH . J 3 HOH B 134 434 10 HOH HOH . J 3 HOH B 135 435 231 HOH HOH . J 3 HOH B 136 436 232 HOH HOH . J 3 HOH B 137 437 276 HOH HOH . J 3 HOH B 138 438 302 HOH HOH . J 3 HOH B 139 439 84 HOH HOH . J 3 HOH B 140 440 295 HOH HOH . J 3 HOH B 141 441 221 HOH HOH . J 3 HOH B 142 442 242 HOH HOH . J 3 HOH B 143 443 299 HOH HOH . J 3 HOH B 144 444 212 HOH HOH . J 3 HOH B 145 445 163 HOH HOH . J 3 HOH B 146 446 336 HOH HOH . J 3 HOH B 147 447 142 HOH HOH . J 3 HOH B 148 448 341 HOH HOH . J 3 HOH B 149 449 239 HOH HOH . J 3 HOH B 150 450 195 HOH HOH . J 3 HOH B 151 451 234 HOH HOH . J 3 HOH B 152 452 85 HOH HOH . J 3 HOH B 153 453 258 HOH HOH . J 3 HOH B 154 454 125 HOH HOH . J 3 HOH B 155 455 237 HOH HOH . J 3 HOH B 156 456 175 HOH HOH . J 3 HOH B 157 457 136 HOH HOH . J 3 HOH B 158 458 151 HOH HOH . J 3 HOH B 159 459 183 HOH HOH . J 3 HOH B 160 460 346 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 SE SE SEY . . . G 2 3.355 40.763 54.123 0.6 74.98 ? SE SEY 201 B 1 HETATM 2 C C SEY . . . G 2 4.038 41.905 52.707 0.6 29.09 ? C SEY 201 B 1 HETATM 3 N N2 SEY . . . G 2 4.246 43.122 52.924 0.6 30.53 ? N2 SEY 201 B 1 HETATM 4 N N1 SEY . . . G 2 4.271 41.436 51.564 0.6 37.11 ? N1 SEY 201 B 1 HETATM 5 H H3 SEY . . . G 2 4.131 40.595 51.403 0.6 44.53 ? H3 SEY 201 B 1 HETATM 6 H H4 SEY . . . G 2 4.576 41.952 50.937 0.6 44.53 ? H4 SEY 201 B 1 HETATM 7 H H1 SEY . . . G 2 4.084 43.459 53.711 0.6 36.64 ? H1 SEY 201 B 1 HETATM 8 H HE1 SEY . . . G 2 4.46 40.208 54.869 0.6 89.98 ? HE1 SEY 201 B 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 8 #