data_8IYS # _model_server_result.job_id cktLU_7Y8xVzZbhpKfOKSA _model_server_result.datetime_utc '2024-11-21 23:21:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8iys # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":401}' # _entry.id 8IYS # _exptl.entry_id 8IYS _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 364.409 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "3-{4-[(4-fluoro-4'-methyl[1,1'-biphenyl]-2-yl)methoxy]phenyl}propanoic acid" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8IYS _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8IYS _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 7 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 C SG CYS 159 E CYS 160 1_555 C SG CYS 229 E CYS 230 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf2 E SG CYS 111 R CYS 111 1_555 E SG CYS 194 R CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? # _chem_comp.formula 'C23 H21 F O3' _chem_comp.formula_weight 364.409 _chem_comp.id YN9 _chem_comp.mon_nstd_flag . _chem_comp.name "3-{4-[(4-fluoro-4'-methyl[1,1'-biphenyl]-2-yl)methoxy]phenyl}propanoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C22 C17 YN9 sing 419 n n C17 C20 YN9 doub 420 n y C17 C21 YN9 sing 421 n y C20 C10 YN9 sing 422 n y C21 C11 YN9 doub 423 n y C10 C3 YN9 doub 424 n y C11 C3 YN9 sing 425 n y C3 C1 YN9 sing 426 n n C7 C1 YN9 doub 427 n y C7 C18 YN9 sing 428 n y C1 C2 YN9 sing 429 n y C18 C19 YN9 doub 430 n y C2 C4 YN9 sing 431 n n C2 C8 YN9 doub 432 n y C19 C8 YN9 sing 433 n y C19 F1 YN9 sing 434 n n C4 O1 YN9 sing 435 n n O1 C9 YN9 sing 436 n n C9 C15 YN9 doub 437 n y C9 C16 YN9 sing 438 n y C15 C13 YN9 sing 439 n y C16 C14 YN9 doub 440 n y C13 C5 YN9 doub 441 n y C14 C5 YN9 sing 442 n y C5 C6 YN9 sing 443 n n C12 C6 YN9 sing 444 n n C12 C23 YN9 sing 445 n n O3 C23 YN9 doub 446 n n C23 O2 YN9 sing 447 n n C6 H1 YN9 sing 448 n n C6 H2 YN9 sing 449 n n C4 H3 YN9 sing 450 n n C4 H4 YN9 sing 451 n n O2 H5 YN9 sing 452 n n C10 H6 YN9 sing 453 n n C11 H7 YN9 sing 454 n n C12 H8 YN9 sing 455 n n C12 H9 YN9 sing 456 n n C13 H10 YN9 sing 457 n n C14 H11 YN9 sing 458 n n C15 H12 YN9 sing 459 n n C16 H13 YN9 sing 460 n n C18 H14 YN9 sing 461 n n C20 H15 YN9 sing 462 n n C21 H16 YN9 sing 463 n n C22 H17 YN9 sing 464 n n C22 H18 YN9 sing 465 n n C22 H19 YN9 sing 466 n n C7 H20 YN9 sing 467 n n C8 H21 YN9 sing 468 n n # _atom_sites.entry_id 8IYS _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 6 GDP A 1 401 401 GDP GDP . G 7 YN9 R 1 401 401 YN9 TUG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C6 YN9 . . . G 7 132.456 136.54 101.375 1 48.83 ? C6 YN9 401 R 1 HETATM 2 C C5 YN9 . . . G 7 133.477 136.317 102.538 1 48.83 ? C5 YN9 401 R 1 HETATM 3 C C4 YN9 . . . G 7 136.193 136.455 106.956 1 48.83 ? C4 YN9 401 R 1 HETATM 4 C C3 YN9 . . . G 7 136.197 138.712 109.186 1 48.83 ? C3 YN9 401 R 1 HETATM 5 O O3 YN9 . . . G 7 129.886 134.767 99.666 1 48.83 ? O3 YN9 401 R 1 HETATM 6 C C2 YN9 . . . G 7 137.487 137.302 107.298 1 48.83 ? C2 YN9 401 R 1 HETATM 7 O O2 YN9 . . . G 7 129.775 136.973 99.739 1 48.83 ? O2 YN9 401 R 1 HETATM 8 C C1 YN9 . . . G 7 137.47 138.338 108.321 1 48.83 ? C1 YN9 401 R 1 HETATM 9 O O1 YN9 . . . G 7 136.312 135.712 105.723 1 48.83 ? O1 YN9 401 R 1 HETATM 10 C C10 YN9 . . . G 7 136.279 138.828 110.599 1 48.83 ? C10 YN9 401 R 1 HETATM 11 C C11 YN9 . . . G 7 134.915 138.98 108.627 1 48.83 ? C11 YN9 401 R 1 HETATM 12 C C12 YN9 . . . G 7 131.077 135.863 101.527 1 48.83 ? C12 YN9 401 R 1 HETATM 13 C C13 YN9 . . . G 7 134.86 136.133 102.285 1 48.83 ? C13 YN9 401 R 1 HETATM 14 C C14 YN9 . . . G 7 133.07 136.292 103.895 1 48.83 ? C14 YN9 401 R 1 HETATM 15 C C15 YN9 . . . G 7 135.799 135.934 103.336 1 48.83 ? C15 YN9 401 R 1 HETATM 16 C C16 YN9 . . . G 7 133.997 136.094 104.958 1 48.83 ? C16 YN9 401 R 1 HETATM 17 C C17 YN9 . . . G 7 133.893 139.419 110.835 1 48.83 ? C17 YN9 401 R 1 HETATM 18 C C18 YN9 . . . G 7 139.897 138.769 107.816 1 48.83 ? C18 YN9 401 R 1 HETATM 19 C C19 YN9 . . . G 7 139.817 137.771 106.858 1 48.83 ? C19 YN9 401 R 1 HETATM 20 C C20 YN9 . . . G 7 135.158 139.171 111.404 1 48.83 ? C20 YN9 401 R 1 HETATM 21 C C21 YN9 . . . G 7 133.788 139.32 109.431 1 48.83 ? C21 YN9 401 R 1 HETATM 22 C C22 YN9 . . . G 7 132.684 139.791 111.706 1 48.83 ? C22 YN9 401 R 1 HETATM 23 C C23 YN9 . . . G 7 130.179 135.871 100.216 1 48.83 ? C23 YN9 401 R 1 HETATM 24 C C7 YN9 . . . G 7 138.701 139.036 108.542 1 48.83 ? C7 YN9 401 R 1 HETATM 25 C C8 YN9 . . . G 7 138.675 137.029 106.569 1 48.83 ? C8 YN9 401 R 1 HETATM 26 C C9 YN9 . . . G 7 135.371 135.913 104.682 1 48.83 ? C9 YN9 401 R 1 HETATM 27 F F1 YN9 . . . G 7 140.996 137.479 106.118 1 48.83 ? F1 YN9 401 R 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 27 #