data_8IYX # _model_server_result.job_id c1PfQX3i6CoRJ7_wNO3LRg _model_server_result.datetime_utc '2024-11-26 05:44:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8iyx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 8IYX # _exptl.entry_id 8IYX _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 583.073 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '1-[4-(3-chlorophenyl)phenyl]carbonyl-4-[2-(4-phenylmethoxyphenyl)ethanoylamino]piperidine-4-carboxylic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8IYX _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8IYX _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 127 _struct_conn.ptnr1_auth_asym_id C _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 127 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 204 _struct_conn.ptnr2_auth_asym_id C _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 204 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.037 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C34 H31 Cl N2 O5' _chem_comp.formula_weight 583.073 _chem_comp.id S6R _chem_comp.mon_nstd_flag . _chem_comp.name '1-[4-(3-chlorophenyl)phenyl]carbonyl-4-[2-(4-phenylmethoxyphenyl)ethanoylamino]piperidine-4-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CL36 C35 S6R sing 275 n n C35 C34 S6R doub 276 n y C35 C37 S6R sing 277 n y C34 C33 S6R sing 278 n y C37 C31 S6R doub 279 n y C33 C32 S6R doub 280 n y C31 C32 S6R sing 281 n y C31 C30 S6R sing 282 n n C29 C28 S6R doub 283 n y C29 C30 S6R sing 284 n y C28 C27 S6R sing 285 n y C30 C38 S6R doub 286 n y C24 N25 S6R sing 287 n n C24 C23 S6R sing 288 n n O01 C02 S6R doub 289 n n C27 C26 S6R sing 290 n n C27 C39 S6R doub 291 n y C38 C39 S6R sing 292 n y N25 C26 S6R sing 293 n n N25 C41 S6R sing 294 n n C26 O40 S6R doub 295 n n N18 C02 S6R sing 296 n n N18 C19 S6R sing 297 n n C02 C03 S6R sing 298 n n C41 C42 S6R sing 299 n n C23 C19 S6R sing 300 n n C19 C42 S6R sing 301 n n C19 C20 S6R sing 302 n n C03 C04 S6R sing 303 n n O21 C20 S6R doub 304 n n C20 O22 S6R sing 305 n n C04 C17 S6R doub 306 n y C04 C05 S6R sing 307 n y C17 C16 S6R sing 308 n y C05 C06 S6R doub 309 n y C16 C07 S6R doub 310 n y C12 C13 S6R doub 311 n y C12 C11 S6R sing 312 n y C06 C07 S6R sing 313 n y C13 C14 S6R sing 314 n y C07 O08 S6R sing 315 n n C11 C10 S6R doub 316 n y C14 C15 S6R doub 317 n y C10 C15 S6R sing 318 n y C10 C09 S6R sing 319 n n O08 C09 S6R sing 320 n n C13 H1 S6R sing 321 n n C15 H2 S6R sing 322 n n C17 H3 S6R sing 323 n n C24 H4 S6R sing 324 n n C24 H5 S6R sing 325 n n C28 H6 S6R sing 326 n n C03 H7 S6R sing 327 n n C03 H8 S6R sing 328 n n C05 H9 S6R sing 329 n n C06 H10 S6R sing 330 n n C09 H11 S6R sing 331 n n C09 H12 S6R sing 332 n n C11 H13 S6R sing 333 n n C12 H14 S6R sing 334 n n C14 H15 S6R sing 335 n n C16 H16 S6R sing 336 n n C23 H17 S6R sing 337 n n C23 H18 S6R sing 338 n n C29 H19 S6R sing 339 n n C32 H20 S6R sing 340 n n C33 H21 S6R sing 341 n n C34 H22 S6R sing 342 n n C37 H23 S6R sing 343 n n C38 H24 S6R sing 344 n n C39 H25 S6R sing 345 n n C41 H26 S6R sing 346 n n C41 H27 S6R sing 347 n n C42 H28 S6R sing 348 n n C42 H29 S6R sing 349 n n N18 H30 S6R sing 350 n n O22 H31 S6R sing 351 n n # _atom_sites.entry_id 8IYX _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id S6R _pdbx_nonpoly_scheme.pdb_strand_id C _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 401 _pdbx_nonpoly_scheme.auth_seq_num 1 _pdbx_nonpoly_scheme.pdb_mon_id S6R _pdbx_nonpoly_scheme.auth_mon_id LIG _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 S6R . . . B 2 96.341 118.659 120.796 1 82.78 ? C10 S6R 401 C 1 HETATM 2 C C13 S6R . . . B 2 96.573 121.181 119.697 1 82.78 ? C13 S6R 401 C 1 HETATM 3 C C15 S6R . . . B 2 97.447 119.436 121.085 1 82.78 ? C15 S6R 401 C 1 HETATM 4 C C17 S6R . . . B 2 95.06 114.327 117.927 1 82.78 ? C17 S6R 401 C 1 HETATM 5 C C20 S6R . . . B 2 94.283 111.357 117.625 1 82.78 ? C20 S6R 401 C 1 HETATM 6 C C24 S6R . . . B 2 94.716 109.132 114.502 1 82.78 ? C24 S6R 401 C 1 HETATM 7 C C26 S6R . . . B 2 96.297 107.085 115.094 1 82.78 ? C26 S6R 401 C 1 HETATM 8 C C28 S6R . . . B 2 95.632 105.242 113.584 1 82.78 ? C28 S6R 401 C 1 HETATM 9 C C02 S6R . . . B 2 95.9 113.101 115.422 1 82.78 ? C02 S6R 401 C 1 HETATM 10 C C03 S6R . . . B 2 96.918 113.322 116.536 1 82.78 ? C03 S6R 401 C 1 HETATM 11 C C04 S6R . . . B 2 96.408 114.194 117.677 1 82.78 ? C04 S6R 401 C 1 HETATM 12 C C05 S6R . . . B 2 97.33 114.855 118.463 1 82.78 ? C05 S6R 401 C 1 HETATM 13 C C06 S6R . . . B 2 96.915 115.652 119.506 1 82.78 ? C06 S6R 401 C 1 HETATM 14 C C07 S6R . . . B 2 95.566 115.783 119.757 1 82.78 ? C07 S6R 401 C 1 HETATM 15 C C09 S6R . . . B 2 96.219 117.27 121.411 1 82.78 ? C09 S6R 401 C 1 HETATM 16 C C11 S6R . . . B 2 95.352 119.141 119.958 1 82.78 ? C11 S6R 401 C 1 HETATM 17 C C12 S6R . . . B 2 95.467 120.404 119.408 1 82.78 ? C12 S6R 401 C 1 HETATM 18 C C14 S6R . . . B 2 97.563 120.699 120.535 1 82.78 ? C14 S6R 401 C 1 HETATM 19 C C16 S6R . . . B 2 94.639 115.121 118.977 1 82.78 ? C16 S6R 401 C 1 HETATM 20 C C19 S6R . . . B 2 94.95 110.839 116.287 1 82.78 ? C19 S6R 401 C 1 HETATM 21 C C23 S6R . . . B 2 94.058 109.829 115.687 1 82.78 ? C23 S6R 401 C 1 HETATM 22 C C27 S6R . . . B 2 95.26 106.067 114.616 1 82.78 ? C27 S6R 401 C 1 HETATM 23 C C29 S6R . . . B 2 94.74 104.311 113.112 1 82.78 ? C29 S6R 401 C 1 HETATM 24 C C30 S6R . . . B 2 93.488 104.219 113.674 1 82.78 ? C30 S6R 401 C 1 HETATM 25 C C31 S6R . . . B 2 92.568 103.159 113.098 1 82.78 ? C31 S6R 401 C 1 HETATM 26 C C32 S6R . . . B 2 91.197 103.186 113.28 1 82.78 ? C32 S6R 401 C 1 HETATM 27 C C33 S6R . . . B 2 90.423 102.179 112.721 1 82.78 ? C33 S6R 401 C 1 HETATM 28 C C34 S6R . . . B 2 91.024 101.163 111.991 1 82.78 ? C34 S6R 401 C 1 HETATM 29 C C35 S6R . . . B 2 92.398 101.155 111.82 1 82.78 ? C35 S6R 401 C 1 HETATM 30 C C37 S6R . . . B 2 93.166 102.152 112.374 1 82.78 ? C37 S6R 401 C 1 HETATM 31 C C38 S6R . . . B 2 93.109 105.046 114.714 1 82.78 ? C38 S6R 401 C 1 HETATM 32 C C39 S6R . . . B 2 94.008 105.982 115.19 1 82.78 ? C39 S6R 401 C 1 HETATM 33 C C41 S6R . . . B 2 96.921 109.615 115.429 1 82.78 ? C41 S6R 401 C 1 HETATM 34 C C42 S6R . . . B 2 96.287 110.283 116.629 1 82.78 ? C42 S6R 401 C 1 HETATM 35 N N18 S6R . . . B 2 95.029 111.94 115.344 1 82.78 ? N18 S6R 401 C 1 HETATM 36 N N25 S6R . . . B 2 96.001 108.513 114.995 1 82.78 ? N25 S6R 401 C 1 HETATM 37 O O01 S6R . . . B 2 95.828 113.91 114.565 1 82.78 ? O01 S6R 401 C 1 HETATM 38 O O08 S6R . . . B 2 95.15 116.595 120.812 1 82.78 ? O08 S6R 401 C 1 HETATM 39 O O21 S6R . . . B 2 93.09 111.751 117.622 1 82.78 ? O21 S6R 401 C 1 HETATM 40 O O22 S6R . . . B 2 94.959 111.38 118.681 1 82.78 ? O22 S6R 401 C 1 HETATM 41 O O40 S6R . . . B 2 97.34 106.706 115.505 1 82.78 ? O40 S6R 401 C 1 HETATM 42 CL CL36 S6R . . . B 2 93.216 99.872 110.895 1 82.78 ? CL36 S6R 401 C 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 236 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 42 #