data_8IZG # _model_server_result.job_id LAP-tdhP1gCHkJ9nILmm5Q _model_server_result.datetime_utc '2024-11-20 17:37:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8izg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":503}' # _entry.id 8IZG # _exptl.entry_id 8IZG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8IZG _cell.length_a 45.6 _cell.length_b 126.306 _cell.length_c 39.405 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8IZG _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 8IZG _atom_sites.fract_transf_matrix[1][1] 0.02193 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007917 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.025377 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PEG A 1 501 501 PEG PEG . C 3 SE6 A 1 502 502 SE6 DRG . D 4 EDO A 1 503 1 EDO EDO . E 4 EDO A 1 504 2 EDO EDO . F 5 HOH A 1 601 190 HOH HOH . F 5 HOH A 2 602 194 HOH HOH . F 5 HOH A 3 603 14 HOH HOH . F 5 HOH A 4 604 127 HOH HOH . F 5 HOH A 5 605 167 HOH HOH . F 5 HOH A 6 606 85 HOH HOH . F 5 HOH A 7 607 132 HOH HOH . F 5 HOH A 8 608 140 HOH HOH . F 5 HOH A 9 609 109 HOH HOH . F 5 HOH A 10 610 165 HOH HOH . F 5 HOH A 11 611 105 HOH HOH . F 5 HOH A 12 612 198 HOH HOH . F 5 HOH A 13 613 158 HOH HOH . F 5 HOH A 14 614 184 HOH HOH . F 5 HOH A 15 615 67 HOH HOH . F 5 HOH A 16 616 200 HOH HOH . F 5 HOH A 17 617 44 HOH HOH . F 5 HOH A 18 618 204 HOH HOH . F 5 HOH A 19 619 134 HOH HOH . F 5 HOH A 20 620 78 HOH HOH . F 5 HOH A 21 621 112 HOH HOH . F 5 HOH A 22 622 30 HOH HOH . F 5 HOH A 23 623 106 HOH HOH . F 5 HOH A 24 624 22 HOH HOH . F 5 HOH A 25 625 8 HOH HOH . F 5 HOH A 26 626 185 HOH HOH . F 5 HOH A 27 627 61 HOH HOH . F 5 HOH A 28 628 90 HOH HOH . F 5 HOH A 29 629 69 HOH HOH . F 5 HOH A 30 630 38 HOH HOH . F 5 HOH A 31 631 93 HOH HOH . F 5 HOH A 32 632 56 HOH HOH . F 5 HOH A 33 633 164 HOH HOH . F 5 HOH A 34 634 163 HOH HOH . F 5 HOH A 35 635 157 HOH HOH . F 5 HOH A 36 636 35 HOH HOH . F 5 HOH A 37 637 161 HOH HOH . F 5 HOH A 38 638 6 HOH HOH . F 5 HOH A 39 639 87 HOH HOH . F 5 HOH A 40 640 177 HOH HOH . F 5 HOH A 41 641 2 HOH HOH . F 5 HOH A 42 642 18 HOH HOH . F 5 HOH A 43 643 111 HOH HOH . F 5 HOH A 44 644 41 HOH HOH . F 5 HOH A 45 645 63 HOH HOH . F 5 HOH A 46 646 75 HOH HOH . F 5 HOH A 47 647 139 HOH HOH . F 5 HOH A 48 648 179 HOH HOH . F 5 HOH A 49 649 144 HOH HOH . F 5 HOH A 50 650 131 HOH HOH . F 5 HOH A 51 651 150 HOH HOH . F 5 HOH A 52 652 91 HOH HOH . F 5 HOH A 53 653 128 HOH HOH . F 5 HOH A 54 654 123 HOH HOH . F 5 HOH A 55 655 39 HOH HOH . F 5 HOH A 56 656 26 HOH HOH . F 5 HOH A 57 657 74 HOH HOH . F 5 HOH A 58 658 7 HOH HOH . F 5 HOH A 59 659 19 HOH HOH . F 5 HOH A 60 660 21 HOH HOH . F 5 HOH A 61 661 13 HOH HOH . F 5 HOH A 62 662 1 HOH HOH . F 5 HOH A 63 663 47 HOH HOH . F 5 HOH A 64 664 31 HOH HOH . F 5 HOH A 65 665 181 HOH HOH . F 5 HOH A 66 666 11 HOH HOH . F 5 HOH A 67 667 155 HOH HOH . F 5 HOH A 68 668 59 HOH HOH . F 5 HOH A 69 669 138 HOH HOH . F 5 HOH A 70 670 108 HOH HOH . F 5 HOH A 71 671 24 HOH HOH . F 5 HOH A 72 672 195 HOH HOH . F 5 HOH A 73 673 43 HOH HOH . F 5 HOH A 74 674 82 HOH HOH . F 5 HOH A 75 675 37 HOH HOH . F 5 HOH A 76 676 71 HOH HOH . F 5 HOH A 77 677 113 HOH HOH . F 5 HOH A 78 678 172 HOH HOH . F 5 HOH A 79 679 53 HOH HOH . F 5 HOH A 80 680 81 HOH HOH . F 5 HOH A 81 681 32 HOH HOH . F 5 HOH A 82 682 124 HOH HOH . F 5 HOH A 83 683 3 HOH HOH . F 5 HOH A 84 684 4 HOH HOH . F 5 HOH A 85 685 20 HOH HOH . F 5 HOH A 86 686 160 HOH HOH . F 5 HOH A 87 687 143 HOH HOH . F 5 HOH A 88 688 133 HOH HOH . F 5 HOH A 89 689 23 HOH HOH . F 5 HOH A 90 690 107 HOH HOH . F 5 HOH A 91 691 104 HOH HOH . F 5 HOH A 92 692 36 HOH HOH . F 5 HOH A 93 693 151 HOH HOH . F 5 HOH A 94 694 152 HOH HOH . F 5 HOH A 95 695 101 HOH HOH . F 5 HOH A 96 696 48 HOH HOH . F 5 HOH A 97 697 79 HOH HOH . F 5 HOH A 98 698 68 HOH HOH . F 5 HOH A 99 699 97 HOH HOH . F 5 HOH A 100 700 156 HOH HOH . F 5 HOH A 101 701 154 HOH HOH . F 5 HOH A 102 702 58 HOH HOH . F 5 HOH A 103 703 88 HOH HOH . F 5 HOH A 104 704 28 HOH HOH . F 5 HOH A 105 705 17 HOH HOH . F 5 HOH A 106 706 121 HOH HOH . F 5 HOH A 107 707 51 HOH HOH . F 5 HOH A 108 708 96 HOH HOH . F 5 HOH A 109 709 34 HOH HOH . F 5 HOH A 110 710 103 HOH HOH . F 5 HOH A 111 711 60 HOH HOH . F 5 HOH A 112 712 70 HOH HOH . F 5 HOH A 113 713 46 HOH HOH . F 5 HOH A 114 714 25 HOH HOH . F 5 HOH A 115 715 99 HOH HOH . F 5 HOH A 116 716 12 HOH HOH . F 5 HOH A 117 717 54 HOH HOH . F 5 HOH A 118 718 202 HOH HOH . F 5 HOH A 119 719 80 HOH HOH . F 5 HOH A 120 720 40 HOH HOH . F 5 HOH A 121 721 126 HOH HOH . F 5 HOH A 122 722 201 HOH HOH . F 5 HOH A 123 723 191 HOH HOH . F 5 HOH A 124 724 33 HOH HOH . F 5 HOH A 125 725 42 HOH HOH . F 5 HOH A 126 726 10 HOH HOH . F 5 HOH A 127 727 153 HOH HOH . F 5 HOH A 128 728 120 HOH HOH . F 5 HOH A 129 729 16 HOH HOH . F 5 HOH A 130 730 203 HOH HOH . F 5 HOH A 131 731 52 HOH HOH . F 5 HOH A 132 732 73 HOH HOH . F 5 HOH A 133 733 64 HOH HOH . F 5 HOH A 134 734 29 HOH HOH . F 5 HOH A 135 735 27 HOH HOH . F 5 HOH A 136 736 57 HOH HOH . F 5 HOH A 137 737 147 HOH HOH . F 5 HOH A 138 738 148 HOH HOH . F 5 HOH A 139 739 86 HOH HOH . F 5 HOH A 140 740 15 HOH HOH . F 5 HOH A 141 741 95 HOH HOH . F 5 HOH A 142 742 186 HOH HOH . F 5 HOH A 143 743 169 HOH HOH . F 5 HOH A 144 744 45 HOH HOH . F 5 HOH A 145 745 9 HOH HOH . F 5 HOH A 146 746 98 HOH HOH . F 5 HOH A 147 747 117 HOH HOH . F 5 HOH A 148 748 65 HOH HOH . F 5 HOH A 149 749 192 HOH HOH . F 5 HOH A 150 750 94 HOH HOH . F 5 HOH A 151 751 92 HOH HOH . F 5 HOH A 152 752 50 HOH HOH . F 5 HOH A 153 753 137 HOH HOH . F 5 HOH A 154 754 49 HOH HOH . F 5 HOH A 155 755 136 HOH HOH . F 5 HOH A 156 756 118 HOH HOH . F 5 HOH A 157 757 159 HOH HOH . F 5 HOH A 158 758 77 HOH HOH . F 5 HOH A 159 759 119 HOH HOH . F 5 HOH A 160 760 5 HOH HOH . F 5 HOH A 161 761 89 HOH HOH . F 5 HOH A 162 762 168 HOH HOH . F 5 HOH A 163 763 178 HOH HOH . F 5 HOH A 164 764 166 HOH HOH . F 5 HOH A 165 765 176 HOH HOH . F 5 HOH A 166 766 146 HOH HOH . F 5 HOH A 167 767 102 HOH HOH . F 5 HOH A 168 768 170 HOH HOH . F 5 HOH A 169 769 189 HOH HOH . F 5 HOH A 170 770 182 HOH HOH . F 5 HOH A 171 771 72 HOH HOH . F 5 HOH A 172 772 55 HOH HOH . F 5 HOH A 173 773 115 HOH HOH . F 5 HOH A 174 774 197 HOH HOH . F 5 HOH A 175 775 116 HOH HOH . F 5 HOH A 176 776 76 HOH HOH . F 5 HOH A 177 777 183 HOH HOH . F 5 HOH A 178 778 129 HOH HOH . F 5 HOH A 179 779 66 HOH HOH . F 5 HOH A 180 780 149 HOH HOH . F 5 HOH A 181 781 83 HOH HOH . F 5 HOH A 182 782 188 HOH HOH . F 5 HOH A 183 783 187 HOH HOH . F 5 HOH A 184 784 62 HOH HOH . F 5 HOH A 185 785 174 HOH HOH . F 5 HOH A 186 786 100 HOH HOH . F 5 HOH A 187 787 135 HOH HOH . F 5 HOH A 188 788 196 HOH HOH . F 5 HOH A 189 789 84 HOH HOH . F 5 HOH A 190 790 171 HOH HOH . F 5 HOH A 191 791 193 HOH HOH . F 5 HOH A 192 792 142 HOH HOH . F 5 HOH A 193 793 199 HOH HOH . F 5 HOH A 194 794 173 HOH HOH . F 5 HOH A 195 795 175 HOH HOH . F 5 HOH A 196 796 125 HOH HOH . F 5 HOH A 197 797 145 HOH HOH . F 5 HOH A 198 798 110 HOH HOH . F 5 HOH A 199 799 162 HOH HOH . F 5 HOH A 200 800 114 HOH HOH . F 5 HOH A 201 801 180 HOH HOH . F 5 HOH A 202 802 130 HOH HOH . F 5 HOH A 203 803 122 HOH HOH . F 5 HOH A 204 804 141 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . D 4 21.721 18.321 16.243 1 40.23 ? C1 EDO 503 A 1 HETATM 2 O O1 EDO . . . D 4 20.748 17.312 15.942 1 31.25 ? O1 EDO 503 A 1 HETATM 3 C C2 EDO . . . D 4 21.49 19.65 15.589 1 37.79 ? C2 EDO 503 A 1 HETATM 4 O O2 EDO . . . D 4 22.671 20.377 15.283 1 46.93 ? O2 EDO 503 A 1 # _model_server_stats.io_time_ms 68 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 230 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #