data_8IZH # _model_server_result.job_id ljOsO1T-DQHfpOvUPaMATw _model_server_result.datetime_utc '2024-11-22 14:21:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8izh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":308}' # _entry.id 8IZH # _exptl.entry_id 8IZH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 74.085 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description AMINOGUANIDINE _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8IZH _cell.length_a 54.59 _cell.length_b 58.248 _cell.length_c 66.326 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8IZH _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 F N N ? 5 G N N ? 5 H N N ? 5 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 7 A CYS 22 1_555 A SG CYS 137 A CYS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.97 ? disulf ? disulf2 A SG CYS 25 A CYS 42 1_555 A SG CYS 41 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf3 A SG CYS 109 A CYS 128 1_555 A SG CYS 210 A CYS 232 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.091 ? disulf ? disulf4 A SG CYS 116 A CYS 136 1_555 A SG CYS 183 A CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf5 A SG CYS 148 A CYS 168 1_555 A SG CYS 162 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? disulf ? disulf6 A SG CYS 173 A CYS 191 1_555 A SG CYS 197 A CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? metalc ? metalc1 A OE1 GLU 52 A GLU 70 1_555 B CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.157 ? metalc ? metalc2 A O ASN 54 A ASN 72 1_555 B CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.159 ? metalc ? metalc3 A O VAL 57 A VAL 75 1_555 B CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.255 ? metalc ? metalc4 A OE2 GLU 62 A GLU 80 1_555 B CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.494 ? # _chem_comp.formula 'C H6 N4' _chem_comp.formula_weight 74.085 _chem_comp.id AGU _chem_comp.mon_nstd_flag . _chem_comp.name AMINOGUANIDINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C N1 AGU doub 1 n n C N2 AGU sing 2 n n C N3 AGU sing 3 n n N1 HN1 AGU sing 4 n n N2 HN21 AGU sing 5 n n N2 HN22 AGU sing 6 n n N3 N4 AGU sing 7 n n N3 HN3 AGU sing 8 n n N4 HN41 AGU sing 9 n n N4 HN42 AGU sing 10 n n # _atom_sites.entry_id 8IZH _atom_sites.fract_transf_matrix[1][1] 0.018318 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017168 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015077 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 301 1 CA CA . C 3 CL A 1 302 1 CL CL . D 3 CL A 1 303 2 CL CL . E 4 SO4 A 1 304 1 SO4 SO4 . F 5 AGU A 1 305 298 AGU LIG . G 5 AGU A 1 306 299 AGU LIG . H 5 AGU A 1 307 300 AGU LIG . I 5 AGU A 1 308 301 AGU LIG . J 6 GOL A 1 309 302 GOL GOL . K 6 GOL A 1 310 303 GOL GOL . L 7 HOH A 1 401 116 HOH HOH . L 7 HOH A 2 402 90 HOH HOH . L 7 HOH A 3 403 40 HOH HOH . L 7 HOH A 4 404 18 HOH HOH . L 7 HOH A 5 405 12 HOH HOH . L 7 HOH A 6 406 152 HOH HOH . L 7 HOH A 7 407 155 HOH HOH . L 7 HOH A 8 408 68 HOH HOH . L 7 HOH A 9 409 122 HOH HOH . L 7 HOH A 10 410 63 HOH HOH . L 7 HOH A 11 411 45 HOH HOH . L 7 HOH A 12 412 52 HOH HOH . L 7 HOH A 13 413 118 HOH HOH . L 7 HOH A 14 414 140 HOH HOH . L 7 HOH A 15 415 22 HOH HOH . L 7 HOH A 16 416 132 HOH HOH . L 7 HOH A 17 417 65 HOH HOH . L 7 HOH A 18 418 6 HOH HOH . L 7 HOH A 19 419 41 HOH HOH . L 7 HOH A 20 420 124 HOH HOH . L 7 HOH A 21 421 5 HOH HOH . L 7 HOH A 22 422 145 HOH HOH . L 7 HOH A 23 423 20 HOH HOH . L 7 HOH A 24 424 24 HOH HOH . L 7 HOH A 25 425 31 HOH HOH . L 7 HOH A 26 426 50 HOH HOH . L 7 HOH A 27 427 76 HOH HOH . L 7 HOH A 28 428 7 HOH HOH . L 7 HOH A 29 429 146 HOH HOH . L 7 HOH A 30 430 93 HOH HOH . L 7 HOH A 31 431 141 HOH HOH . L 7 HOH A 32 432 82 HOH HOH . L 7 HOH A 33 433 28 HOH HOH . L 7 HOH A 34 434 144 HOH HOH . L 7 HOH A 35 435 133 HOH HOH . L 7 HOH A 36 436 121 HOH HOH . L 7 HOH A 37 437 42 HOH HOH . L 7 HOH A 38 438 60 HOH HOH . L 7 HOH A 39 439 29 HOH HOH . L 7 HOH A 40 440 128 HOH HOH . L 7 HOH A 41 441 130 HOH HOH . L 7 HOH A 42 442 21 HOH HOH . L 7 HOH A 43 443 89 HOH HOH . L 7 HOH A 44 444 35 HOH HOH . L 7 HOH A 45 445 92 HOH HOH . L 7 HOH A 46 446 75 HOH HOH . L 7 HOH A 47 447 47 HOH HOH . L 7 HOH A 48 448 85 HOH HOH . L 7 HOH A 49 449 127 HOH HOH . L 7 HOH A 50 450 34 HOH HOH . L 7 HOH A 51 451 106 HOH HOH . L 7 HOH A 52 452 131 HOH HOH . L 7 HOH A 53 453 151 HOH HOH . L 7 HOH A 54 454 149 HOH HOH . L 7 HOH A 55 455 147 HOH HOH . L 7 HOH A 56 456 79 HOH HOH . L 7 HOH A 57 457 55 HOH HOH . L 7 HOH A 58 458 26 HOH HOH . L 7 HOH A 59 459 59 HOH HOH . L 7 HOH A 60 460 120 HOH HOH . L 7 HOH A 61 461 8 HOH HOH . L 7 HOH A 62 462 43 HOH HOH . L 7 HOH A 63 463 107 HOH HOH . L 7 HOH A 64 464 123 HOH HOH . L 7 HOH A 65 465 14 HOH HOH . L 7 HOH A 66 466 17 HOH HOH . L 7 HOH A 67 467 148 HOH HOH . L 7 HOH A 68 468 33 HOH HOH . L 7 HOH A 69 469 88 HOH HOH . L 7 HOH A 70 470 150 HOH HOH . L 7 HOH A 71 471 27 HOH HOH . L 7 HOH A 72 472 70 HOH HOH . L 7 HOH A 73 473 83 HOH HOH . L 7 HOH A 74 474 119 HOH HOH . L 7 HOH A 75 475 16 HOH HOH . L 7 HOH A 76 476 126 HOH HOH . L 7 HOH A 77 477 11 HOH HOH . L 7 HOH A 78 478 39 HOH HOH . L 7 HOH A 79 479 78 HOH HOH . L 7 HOH A 80 480 101 HOH HOH . L 7 HOH A 81 481 23 HOH HOH . L 7 HOH A 82 482 67 HOH HOH . L 7 HOH A 83 483 25 HOH HOH . L 7 HOH A 84 484 73 HOH HOH . L 7 HOH A 85 485 99 HOH HOH . L 7 HOH A 86 486 153 HOH HOH . L 7 HOH A 87 487 104 HOH HOH . L 7 HOH A 88 488 125 HOH HOH . L 7 HOH A 89 489 37 HOH HOH . L 7 HOH A 90 490 84 HOH HOH . L 7 HOH A 91 491 44 HOH HOH . L 7 HOH A 92 492 13 HOH HOH . L 7 HOH A 93 493 4 HOH HOH . L 7 HOH A 94 494 3 HOH HOH . L 7 HOH A 95 495 19 HOH HOH . L 7 HOH A 96 496 72 HOH HOH . L 7 HOH A 97 497 10 HOH HOH . L 7 HOH A 98 498 97 HOH HOH . L 7 HOH A 99 499 53 HOH HOH . L 7 HOH A 100 500 56 HOH HOH . L 7 HOH A 101 501 129 HOH HOH . L 7 HOH A 102 502 54 HOH HOH . L 7 HOH A 103 503 36 HOH HOH . L 7 HOH A 104 504 105 HOH HOH . L 7 HOH A 105 505 32 HOH HOH . L 7 HOH A 106 506 51 HOH HOH . L 7 HOH A 107 507 81 HOH HOH . L 7 HOH A 108 508 136 HOH HOH . L 7 HOH A 109 509 62 HOH HOH . L 7 HOH A 110 510 57 HOH HOH . L 7 HOH A 111 511 154 HOH HOH . L 7 HOH A 112 512 137 HOH HOH . L 7 HOH A 113 513 77 HOH HOH . L 7 HOH A 114 514 71 HOH HOH . L 7 HOH A 115 515 30 HOH HOH . L 7 HOH A 116 516 61 HOH HOH . L 7 HOH A 117 517 91 HOH HOH . L 7 HOH A 118 518 48 HOH HOH . L 7 HOH A 119 519 96 HOH HOH . L 7 HOH A 120 520 58 HOH HOH . L 7 HOH A 121 521 15 HOH HOH . L 7 HOH A 122 522 49 HOH HOH . L 7 HOH A 123 523 94 HOH HOH . L 7 HOH A 124 524 111 HOH HOH . L 7 HOH A 125 525 113 HOH HOH . L 7 HOH A 126 526 95 HOH HOH . L 7 HOH A 127 527 115 HOH HOH . L 7 HOH A 128 528 117 HOH HOH . L 7 HOH A 129 529 143 HOH HOH . L 7 HOH A 130 530 109 HOH HOH . L 7 HOH A 131 531 108 HOH HOH . L 7 HOH A 132 532 98 HOH HOH . L 7 HOH A 133 533 142 HOH HOH . L 7 HOH A 134 534 102 HOH HOH . L 7 HOH A 135 535 74 HOH HOH . L 7 HOH A 136 536 103 HOH HOH . L 7 HOH A 137 537 80 HOH HOH . L 7 HOH A 138 538 110 HOH HOH . L 7 HOH A 139 539 66 HOH HOH . L 7 HOH A 140 540 114 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C AGU . . . I 5 15.785 15.517 -19.818 1 32.42 ? C AGU 308 A 1 HETATM 2 N N1 AGU . . . I 5 15.842 14.22 -20.119 1 33.18 ? N1 AGU 308 A 1 HETATM 3 N N2 AGU . . . I 5 16.985 16.019 -19.505 1 31.77 ? N2 AGU 308 A 1 HETATM 4 N N3 AGU . . . I 5 14.678 16.214 -19.837 1 30.94 ? N3 AGU 308 A 1 HETATM 5 N N4 AGU . . . I 5 14.696 17.515 -19.422 1 31.09 ? N4 AGU 308 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 325 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 5 #