data_8J1M
#
_model_server_result.job_id            qKv1rBXkQ3cit5XZxsjLfQ 
_model_server_result.datetime_utc      '2024-11-15 02:15:56' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8j1m 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":401}' 
#
_entry.id    8J1M 
#
_exptl.entry_id    8J1M 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              112.411 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CADMIUM ION' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          113.92 
_cell.angle_gamma         90 
_cell.entry_id            8J1M 
_cell.length_a            116.407 
_cell.length_b            51.012 
_cell.length_c            51.817 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8J1M 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O MET 71 A MET 91 1_555 L HG HG . A HG 411 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.064 ? 
metalc ? metalc2 A SG CYS 75 A CYS 95 1_555 L HG HG . A HG 411 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.377 ? 
metalc ? metalc3 A OD1 ASP 124 A ASP 144 1_555 D CD CD . A CD 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? 
metalc ? metalc4 A NE2 HIS 129 A HIS 149 1_555 D CD CD . A CD 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? 
metalc ? metalc5 A NE2 HIS 131 A HIS 151 1_555 D CD CD . A CD 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? 
metalc ? metalc6 A NE2 HIS 157 A HIS 177 1_555 C CD CD . A CD 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.344 ? 
metalc ? metalc7 A OD1 ASN 158 A ASN 178 1_555 B CD CD . A CD 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.22 ? 
metalc ? metalc8 A OE1 GLU 161 A GLU 181 1_555 B CD CD . A CD 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? 
metalc ? metalc9 A OE2 GLU 161 A GLU 181 1_555 C CD CD . A CD 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.203 ? 
metalc ? metalc10 A OE1 GLN 187 A GLN 207 1_555 C CD CD . A CD 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? 
metalc ? metalc11 A OD1 ASP 188 A ASP 208 1_555 B CD CD . A CD 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.351 ? 
metalc ? metalc12 A OE1 GLU 191 A GLU 211 1_555 B CD CD . A CD 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? 
metalc ? metalc13 A OE1 GLU 191 A GLU 211 1_555 C CD CD . A CD 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.446 ? 
metalc ? metalc14 A OE2 GLU 191 A GLU 211 1_555 C CD CD . A CD 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? 
metalc ? metalc15 A SG CYS 194 A CYS 214 1_555 L HG HG . A HG 411 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.454 ? 
metalc ? metalc16 A OE2 GLU 220 A GLU 240 1_555 B CD CD . A CD 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.258 ? 
metalc ? metalc17 A OE1 GLU 256 A GLU 276 1_555 D CD CD . A CD 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.379 ? 
metalc ? metalc18 A OE2 GLU 256 A GLU 276 1_555 D CD CD . A CD 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.366 ? 
metalc ? metalc19 B CD CD . A CD 401 1_555 M O HOH . A HOH 523 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.367 ? 
metalc ? metalc20 D CD CD . A CD 403 1_555 M O HOH . A HOH 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.39 ? 
metalc ? metalc21 L HG HG . A HG 411 1_555 M O HOH . A HOH 519 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.903 ? 
#
_chem_comp.formula           'Cd 2' 
_chem_comp.formula_weight    112.411 
_chem_comp.id                CD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CADMIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     8J1M 
_atom_sites.fract_transf_matrix[1][1]    0.008591 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.00381 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.019603 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.021112 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CD A 1 401 1 CD CD . 
C 2 CD A 1 402 3 CD CD . 
D 2 CD A 1 403 4 CD CD . 
E 3 CL A 1 404 2 CL CL . 
F 3 CL A 1 405 5 CL CL . 
G 4 MPG A 1 406 1 MPG MPG . 
H 4 MPG A 1 407 2 MPG MPG . 
I 4 MPG A 1 408 3 MPG MPG . 
J 4 MPG A 1 409 4 MPG MPG . 
K 4 MPG A 1 410 5 MPG MPG . 
L 5 HG A 1 411 1 HG HG . 
M 6 HOH A 1 501 17 HOH HOH . 
M 6 HOH A 2 502 42 HOH HOH . 
M 6 HOH A 3 503 45 HOH HOH . 
M 6 HOH A 4 504 19 HOH HOH . 
M 6 HOH A 5 505 10 HOH HOH . 
M 6 HOH A 6 506 56 HOH HOH . 
M 6 HOH A 7 507 44 HOH HOH . 
M 6 HOH A 8 508 11 HOH HOH . 
M 6 HOH A 9 509 30 HOH HOH . 
M 6 HOH A 10 510 51 HOH HOH . 
M 6 HOH A 11 511 25 HOH HOH . 
M 6 HOH A 12 512 34 HOH HOH . 
M 6 HOH A 13 513 24 HOH HOH . 
M 6 HOH A 14 514 59 HOH HOH . 
M 6 HOH A 15 515 37 HOH HOH . 
M 6 HOH A 16 516 9 HOH HOH . 
M 6 HOH A 17 517 36 HOH HOH . 
M 6 HOH A 18 518 8 HOH HOH . 
M 6 HOH A 19 519 4 HOH HOH . 
M 6 HOH A 20 520 35 HOH HOH . 
M 6 HOH A 21 521 50 HOH HOH . 
M 6 HOH A 22 522 27 HOH HOH . 
M 6 HOH A 23 523 1 HOH HOH . 
M 6 HOH A 24 524 23 HOH HOH . 
M 6 HOH A 25 525 21 HOH HOH . 
M 6 HOH A 26 526 46 HOH HOH . 
M 6 HOH A 27 527 2 HOH HOH . 
M 6 HOH A 28 528 31 HOH HOH . 
M 6 HOH A 29 529 32 HOH HOH . 
M 6 HOH A 30 530 40 HOH HOH . 
M 6 HOH A 31 531 52 HOH HOH . 
M 6 HOH A 32 532 38 HOH HOH . 
M 6 HOH A 33 533 41 HOH HOH . 
M 6 HOH A 34 534 15 HOH HOH . 
M 6 HOH A 35 535 39 HOH HOH . 
M 6 HOH A 36 536 47 HOH HOH . 
M 6 HOH A 37 537 3 HOH HOH . 
M 6 HOH A 38 538 26 HOH HOH . 
M 6 HOH A 39 539 43 HOH HOH . 
M 6 HOH A 40 540 14 HOH HOH . 
M 6 HOH A 41 541 53 HOH HOH . 
M 6 HOH A 42 542 60 HOH HOH . 
M 6 HOH A 43 543 6 HOH HOH . 
M 6 HOH A 44 544 16 HOH HOH . 
M 6 HOH A 45 545 54 HOH HOH . 
M 6 HOH A 46 546 49 HOH HOH . 
M 6 HOH A 47 547 58 HOH HOH . 
M 6 HOH A 48 548 29 HOH HOH . 
M 6 HOH A 49 549 22 HOH HOH . 
M 6 HOH A 50 550 7 HOH HOH . 
M 6 HOH A 51 551 55 HOH HOH . 
M 6 HOH A 52 552 48 HOH HOH . 
M 6 HOH A 53 553 5 HOH HOH . 
M 6 HOH A 54 554 20 HOH HOH . 
M 6 HOH A 55 555 12 HOH HOH . 
M 6 HOH A 56 556 13 HOH HOH . 
M 6 HOH A 57 557 28 HOH HOH . 
M 6 HOH A 58 558 57 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CD 
_atom_site.label_atom_id         CD 
_atom_site.label_comp_id         CD 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         B 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               -15.814 
_atom_site.Cartn_y               -27.327 
_atom_site.Cartn_z               3.083 
_atom_site.occupancy             0.42 
_atom_site.B_iso_or_equiv        36.34 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CD 
_atom_site.auth_comp_id          CD 
_atom_site.auth_seq_id           401 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           261 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#