data_8J2Y # _model_server_result.job_id IOVmHX-Qn_mnPbW8oj16zw _model_server_result.datetime_utc '2024-10-28 14:27:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8j2y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":403}' # _entry.id 8J2Y # _exptl.entry_id 8J2Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8J2Y _cell.length_a 108.773 _cell.length_b 125.836 _cell.length_c 124.63 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8J2Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id metalc _struct_conn.details ? _struct_conn.id metalc1 _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_atom_id NE2 _struct_conn.ptnr1_label_comp_id HIS _struct_conn.ptnr1_label_seq_id 103 _struct_conn.ptnr1_auth_asym_id B _struct_conn.ptnr1_auth_comp_id HIS _struct_conn.ptnr1_auth_seq_id 103 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id H _struct_conn.ptnr2_label_atom_id CO _struct_conn.ptnr2_label_comp_id B12 _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id B12 _struct_conn.ptnr2_auth_seq_id 401 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.306 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 460 n n C1 C2 PEG sing 461 n n C1 H11 PEG sing 462 n n C1 H12 PEG sing 463 n n O1 HO1 PEG sing 464 n n C2 O2 PEG sing 465 n n C2 H21 PEG sing 466 n n C2 H22 PEG sing 467 n n O2 C3 PEG sing 468 n n C3 C4 PEG sing 469 n n C3 H31 PEG sing 470 n n C3 H32 PEG sing 471 n n C4 O4 PEG sing 472 n n C4 H41 PEG sing 473 n n C4 H42 PEG sing 474 n n O4 HO4 PEG sing 475 n n # _atom_sites.entry_id 8J2Y _atom_sites.fract_transf_matrix[1][1] 0.009193 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007947 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008024 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 B12 A 1 401 401 B12 B12 . D 3 5AD A 1 402 402 5AD 5AD . E 4 PEG A 1 403 403 PEG PEG . F 5 SCN A 1 404 404 SCN SCN . G 5 SCN A 1 405 403 SCN SCN . H 2 B12 B 1 401 401 B12 B12 . I 3 5AD B 1 402 402 5AD 5AD . J 6 HOH A 1 501 115 HOH HOH . J 6 HOH A 2 502 90 HOH HOH . J 6 HOH A 3 503 80 HOH HOH . J 6 HOH A 4 504 53 HOH HOH . J 6 HOH A 5 505 79 HOH HOH . J 6 HOH A 6 506 56 HOH HOH . J 6 HOH A 7 507 82 HOH HOH . J 6 HOH A 8 508 86 HOH HOH . J 6 HOH A 9 509 31 HOH HOH . J 6 HOH A 10 510 124 HOH HOH . J 6 HOH A 11 511 13 HOH HOH . J 6 HOH A 12 512 74 HOH HOH . J 6 HOH A 13 513 55 HOH HOH . J 6 HOH A 14 514 52 HOH HOH . J 6 HOH A 15 515 35 HOH HOH . J 6 HOH A 16 516 19 HOH HOH . J 6 HOH A 17 517 142 HOH HOH . J 6 HOH A 18 518 26 HOH HOH . J 6 HOH A 19 519 22 HOH HOH . J 6 HOH A 20 520 51 HOH HOH . J 6 HOH A 21 521 109 HOH HOH . J 6 HOH A 22 522 58 HOH HOH . J 6 HOH A 23 523 57 HOH HOH . J 6 HOH A 24 524 60 HOH HOH . J 6 HOH A 25 525 37 HOH HOH . J 6 HOH A 26 526 1 HOH HOH . J 6 HOH A 27 527 133 HOH HOH . J 6 HOH A 28 528 33 HOH HOH . J 6 HOH A 29 529 17 HOH HOH . J 6 HOH A 30 530 10 HOH HOH . J 6 HOH A 31 531 125 HOH HOH . J 6 HOH A 32 532 81 HOH HOH . J 6 HOH A 33 533 8 HOH HOH . J 6 HOH A 34 534 71 HOH HOH . J 6 HOH A 35 535 126 HOH HOH . J 6 HOH A 36 536 117 HOH HOH . J 6 HOH A 37 537 66 HOH HOH . J 6 HOH A 38 538 118 HOH HOH . J 6 HOH A 39 539 9 HOH HOH . J 6 HOH A 40 540 12 HOH HOH . J 6 HOH A 41 541 148 HOH HOH . J 6 HOH A 42 542 28 HOH HOH . J 6 HOH A 43 543 32 HOH HOH . J 6 HOH A 44 544 36 HOH HOH . J 6 HOH A 45 545 47 HOH HOH . J 6 HOH A 46 546 40 HOH HOH . J 6 HOH A 47 547 20 HOH HOH . J 6 HOH A 48 548 139 HOH HOH . J 6 HOH A 49 549 62 HOH HOH . J 6 HOH A 50 550 41 HOH HOH . J 6 HOH A 51 551 59 HOH HOH . J 6 HOH A 52 552 16 HOH HOH . J 6 HOH A 53 553 132 HOH HOH . J 6 HOH A 54 554 152 HOH HOH . J 6 HOH A 55 555 44 HOH HOH . J 6 HOH A 56 556 137 HOH HOH . J 6 HOH A 57 557 143 HOH HOH . J 6 HOH A 58 558 154 HOH HOH . J 6 HOH A 59 559 88 HOH HOH . J 6 HOH A 60 560 91 HOH HOH . J 6 HOH A 61 561 158 HOH HOH . J 6 HOH A 62 562 147 HOH HOH . J 6 HOH A 63 563 153 HOH HOH . J 6 HOH A 64 564 156 HOH HOH . K 6 HOH B 1 501 11 HOH HOH . K 6 HOH B 2 502 29 HOH HOH . K 6 HOH B 3 503 144 HOH HOH . K 6 HOH B 4 504 145 HOH HOH . K 6 HOH B 5 505 25 HOH HOH . K 6 HOH B 6 506 77 HOH HOH . K 6 HOH B 7 507 61 HOH HOH . K 6 HOH B 8 508 128 HOH HOH . K 6 HOH B 9 509 69 HOH HOH . K 6 HOH B 10 510 129 HOH HOH . K 6 HOH B 11 511 112 HOH HOH . K 6 HOH B 12 512 140 HOH HOH . K 6 HOH B 13 513 95 HOH HOH . K 6 HOH B 14 514 102 HOH HOH . K 6 HOH B 15 515 49 HOH HOH . K 6 HOH B 16 516 76 HOH HOH . K 6 HOH B 17 517 101 HOH HOH . K 6 HOH B 18 518 65 HOH HOH . K 6 HOH B 19 519 54 HOH HOH . K 6 HOH B 20 520 7 HOH HOH . K 6 HOH B 21 521 45 HOH HOH . K 6 HOH B 22 522 24 HOH HOH . K 6 HOH B 23 523 43 HOH HOH . K 6 HOH B 24 524 114 HOH HOH . K 6 HOH B 25 525 75 HOH HOH . K 6 HOH B 26 526 84 HOH HOH . K 6 HOH B 27 527 5 HOH HOH . K 6 HOH B 28 528 73 HOH HOH . K 6 HOH B 29 529 23 HOH HOH . K 6 HOH B 30 530 21 HOH HOH . K 6 HOH B 31 531 34 HOH HOH . K 6 HOH B 32 532 72 HOH HOH . K 6 HOH B 33 533 64 HOH HOH . K 6 HOH B 34 534 38 HOH HOH . K 6 HOH B 35 535 48 HOH HOH . K 6 HOH B 36 536 96 HOH HOH . K 6 HOH B 37 537 105 HOH HOH . K 6 HOH B 38 538 4 HOH HOH . K 6 HOH B 39 539 30 HOH HOH . K 6 HOH B 40 540 67 HOH HOH . K 6 HOH B 41 541 141 HOH HOH . K 6 HOH B 42 542 92 HOH HOH . K 6 HOH B 43 543 70 HOH HOH . K 6 HOH B 44 544 127 HOH HOH . K 6 HOH B 45 545 14 HOH HOH . K 6 HOH B 46 546 3 HOH HOH . K 6 HOH B 47 547 93 HOH HOH . K 6 HOH B 48 548 63 HOH HOH . K 6 HOH B 49 549 111 HOH HOH . K 6 HOH B 50 550 116 HOH HOH . K 6 HOH B 51 551 42 HOH HOH . K 6 HOH B 52 552 27 HOH HOH . K 6 HOH B 53 553 6 HOH HOH . K 6 HOH B 54 554 146 HOH HOH . K 6 HOH B 55 555 39 HOH HOH . K 6 HOH B 56 556 157 HOH HOH . K 6 HOH B 57 557 120 HOH HOH . K 6 HOH B 58 558 113 HOH HOH . K 6 HOH B 59 559 97 HOH HOH . K 6 HOH B 60 560 122 HOH HOH . K 6 HOH B 61 561 18 HOH HOH . K 6 HOH B 62 562 103 HOH HOH . K 6 HOH B 63 563 130 HOH HOH . K 6 HOH B 64 564 83 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . E 4 -4.723 -52.211 3.685 1 72.46 ? C1 PEG 403 A 1 HETATM 2 O O1 PEG . . . E 4 -3.676 -53.138 3.936 1 74.69 ? O1 PEG 403 A 1 HETATM 3 C C2 PEG . . . E 4 -6.05 -52.881 3.483 1 72.24 ? C2 PEG 403 A 1 HETATM 4 O O2 PEG . . . E 4 -7.101 -52.03 3.934 1 69.71 ? O2 PEG 403 A 1 HETATM 5 C C3 PEG . . . E 4 -8.362 -52.692 3.999 1 69.97 ? C3 PEG 403 A 1 HETATM 6 C C4 PEG . . . E 4 -9.08 -52.336 5.26 1 67.88 ? C4 PEG 403 A 1 HETATM 7 O O4 PEG . . . E 4 -9.027 -53.378 6.228 1 70.2 ? O4 PEG 403 A 1 # _model_server_stats.io_time_ms 71 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 7 #