data_8J6I
#
_model_server_result.job_id            y3Am8MMmB7qtaERF6Nqwuw 
_model_server_result.datetime_utc      '2024-11-21 14:00:34' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8j6i 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":401}' 
#
_entry.id    8J6I 
#
_exptl.entry_id    8J6I 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              386.402 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '2-[[2,2-dimethyl-3-[3-(5-oxidanylpyridin-2-yl)-1,2,4-oxadiazol-5-yl]propanoyl]amino]cyclohexene-1-carboxylic acid' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8J6I 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8J6I 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    pentameric 
_pdbx_struct_assembly.oligomeric_count      5 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      6 
_struct_asym.id                             F 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 18 R CYS 18 1_555 A SG CYS 183 R CYS 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
disulf ? disulf2 A SG CYS 100 R CYS 100 1_555 A SG CYS 177 R CYS 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf3 C SG CYS 120 B CYS 121 1_555 C SG CYS 148 B CYS 149 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
#
_chem_comp.formula           'C19 H22 N4 O5' 
_chem_comp.formula_weight    386.402 
_chem_comp.id                FI7 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '2-[[2,2-dimethyl-3-[3-(5-oxidanylpyridin-2-yl)-1,2,4-oxadiazol-5-yl]propanoyl]amino]cyclohexene-1-carboxylic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C27 C28 FI7 sing 83 n n 
C27 C26 FI7 sing 84 n n 
C28 C20 FI7 sing 85 n n 
C26 C25 FI7 sing 86 n n 
C01 C02 FI7 sing 87 n n 
C20 N19 FI7 sing 88 n n 
C20 C21 FI7 doub 89 n n 
N19 C17 FI7 sing 90 n n 
C25 C21 FI7 sing 91 n n 
C21 C22 FI7 sing 92 n n 
C17 C02 FI7 sing 93 n n 
C17 O18 FI7 doub 94 n n 
C02 C03 FI7 sing 95 n n 
C02 C04 FI7 sing 96 n n 
C22 O23 FI7 doub 97 n n 
C22 O24 FI7 sing 98 n n 
O16 N15 FI7 sing 99 n y 
O16 C05 FI7 sing 100 n y 
C04 C05 FI7 sing 101 n n 
N15 C07 FI7 doub 102 n y 
C05 N06 FI7 doub 103 n y 
C07 N06 FI7 sing 104 n y 
C07 C08 FI7 sing 105 n n 
C09 C08 FI7 doub 106 n y 
C09 C10 FI7 sing 107 n y 
C08 N14 FI7 sing 108 n y 
C10 C11 FI7 doub 109 n y 
N14 C13 FI7 doub 110 n y 
C11 C13 FI7 sing 111 n y 
C11 O12 FI7 sing 112 n n 
C10 H1 FI7 sing 113 n n 
C13 H2 FI7 sing 114 n n 
C26 H5 FI7 sing 115 n n 
C26 H6 FI7 sing 116 n n 
C28 H7 FI7 sing 117 n n 
C28 H8 FI7 sing 118 n n 
C01 H9 FI7 sing 119 n n 
C01 H10 FI7 sing 120 n n 
C01 H11 FI7 sing 121 n n 
C03 H12 FI7 sing 122 n n 
C03 H13 FI7 sing 123 n n 
C03 H14 FI7 sing 124 n n 
C04 H15 FI7 sing 125 n n 
C04 H16 FI7 sing 126 n n 
C09 H17 FI7 sing 127 n n 
C25 H18 FI7 sing 128 n n 
C25 H19 FI7 sing 129 n n 
C27 H20 FI7 sing 130 n n 
C27 H21 FI7 sing 131 n n 
N19 H22 FI7 sing 132 n n 
O12 H23 FI7 sing 133 n n 
O24 H24 FI7 sing 134 n n 
#
_atom_sites.entry_id                     8J6I 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
_pdbx_nonpoly_scheme.asym_id          F 
_pdbx_nonpoly_scheme.entity_id        6 
_pdbx_nonpoly_scheme.mon_id           FI7 
_pdbx_nonpoly_scheme.pdb_strand_id    R 
_pdbx_nonpoly_scheme.ndb_seq_num      1 
_pdbx_nonpoly_scheme.pdb_seq_num      401 
_pdbx_nonpoly_scheme.auth_seq_num     401 
_pdbx_nonpoly_scheme.pdb_mon_id       FI7 
_pdbx_nonpoly_scheme.auth_mon_id      LIG 
_pdbx_nonpoly_scheme.pdb_ins_code     . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C10 FI7 . . . F 6 104.168 115.147 124.71 1 103.36 ? C10 FI7 401 R 1 
HETATM 2 C C13 FI7 . . . F 6 105.926 113.63 123.484 1 98.79 ? C13 FI7 401 R 1 
HETATM 3 C C17 FI7 . . . F 6 113.584 116.865 125.49 1 98.24 ? C17 FI7 401 R 1 
HETATM 4 C C20 FI7 . . . F 6 115.951 117.333 125.078 1 96 ? C20 FI7 401 R 1 
HETATM 5 C C21 FI7 . . . F 6 116.62 115.967 124.615 1 94.83 ? C21 FI7 401 R 1 
HETATM 6 C C22 FI7 . . . F 6 115.898 115.124 123.564 1 101.75 ? C22 FI7 401 R 1 
HETATM 7 C C26 FI7 . . . F 6 118.711 116.805 125.848 1 99.73 ? C26 FI7 401 R 1 
HETATM 8 C C28 FI7 . . . F 6 116.545 117.942 126.227 1 98.97 ? C28 FI7 401 R 1 
HETATM 9 C C01 FI7 . . . F 6 111.647 116.109 124.179 1 98.17 ? C01 FI7 401 R 1 
HETATM 10 C C02 FI7 . . . F 6 112.046 117.014 125.308 1 98.51 ? C02 FI7 401 R 1 
HETATM 11 C C03 FI7 . . . F 6 111.652 118.488 124.975 1 103.3 ? C03 FI7 401 R 1 
HETATM 12 C C04 FI7 . . . F 6 111.426 116.596 126.639 1 94.1 ? C04 FI7 401 R 1 
HETATM 13 C C05 FI7 . . . F 6 109.847 116.499 126.579 1 96.42 ? C05 FI7 401 R 1 
HETATM 14 C C07 FI7 . . . F 6 107.848 115.937 126.005 1 100.54 ? C07 FI7 401 R 1 
HETATM 15 C C08 FI7 . . . F 6 106.718 115.302 125.242 1 103.14 ? C08 FI7 401 R 1 
HETATM 16 C C09 FI7 . . . F 6 105.27 115.772 125.485 1 102.99 ? C09 FI7 401 R 1 
HETATM 17 C C11 FI7 . . . F 6 104.478 114.085 123.714 1 104.52 ? C11 FI7 401 R 1 
HETATM 18 C C25 FI7 . . . F 6 118.057 115.952 124.584 1 97.5 ? C25 FI7 401 R 1 
HETATM 19 C C27 FI7 . . . F 6 117.789 117.012 126.804 1 99.38 ? C27 FI7 401 R 1 
HETATM 20 N N06 FI7 . . . F 6 109.138 115.776 125.717 1 97.78 ? N06 FI7 401 R 1 
HETATM 21 N N14 FI7 . . . F 6 107.016 114.257 124.254 1 99.69 ? N14 FI7 401 R 1 
HETATM 22 N N15 FI7 . . . F 6 107.743 116.755 127.02 1 100.09 ? N15 FI7 401 R 1 
HETATM 23 N N19 FI7 . . . F 6 114.533 117.615 124.775 1 98.03 ? N19 FI7 401 R 1 
HETATM 24 O O12 FI7 . . . F 6 103.419 113.498 122.979 1 104.02 ? O12 FI7 401 R 1 
HETATM 25 O O16 FI7 . . . F 6 108.998 117.098 127.387 1 102.28 ? O16 FI7 401 R 1 
HETATM 26 O O18 FI7 . . . F 6 114.002 116.06 126.252 1 97.49 ? O18 FI7 401 R 1 
HETATM 27 O O23 FI7 . . . F 6 114.628 115.075 123.554 1 105.33 ? O23 FI7 401 R 1 
HETATM 28 O O24 FI7 . . . F 6 116.607 114.45 122.666 1 105.58 ? O24 FI7 401 R 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           265 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           28 
#