data_8J6M # _model_server_result.job_id bOOUahJ6v_EEqfwEcvHWMQ _model_server_result.datetime_utc '2024-12-04 08:28:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8j6m # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":906}' # _entry.id 8J6M # _exptl.entry_id 8J6M _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 282.461 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'OLEIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8J6M _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8J6M _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 I N N ? 5 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 401 B CYS 130 1_555 A SG CYS 493 B CYS 222 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 A SG CYS 483 B CYS 212 1_555 A SG CYS 542 B CYS 271 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf3 A SG CYS 750 B CYS 479 1_555 A SG CYS 836 B CYS 565 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf4 A SG CYS 756 B CYS 485 1_555 A SG CYS 1053 B CYS 782 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf5 B SG CYS 401 A CYS 130 1_555 B SG CYS 493 A CYS 222 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf6 B SG CYS 483 A CYS 212 1_555 B SG CYS 542 A CYS 271 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? disulf ? disulf7 B SG CYS 750 A CYS 479 1_555 B SG CYS 836 A CYS 565 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf8 B SG CYS 756 A CYS 485 1_555 B SG CYS 1053 A CYS 782 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? metalc ? metalc1 A O ASN 490 B ASN 219 1_555 H NA NA . B NA 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.975 ? metalc ? metalc2 A O MET 492 B MET 221 1_555 H NA NA . B NA 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.67 ? metalc ? metalc3 A O PRO 494 B PRO 223 1_555 H NA NA . B NA 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.177 ? metalc ? metalc4 A NE2 HIS 834 B HIS 563 1_555 G ZN ZN . B ZN 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.141 ? metalc ? metalc5 A OD1 ASP 845 B ASP 574 1_555 G ZN ZN . B ZN 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.857 ? metalc ? metalc6 A OD2 ASP 845 B ASP 574 1_555 G ZN ZN . B ZN 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.682 ? metalc ? metalc7 A NE2 HIS 1062 B HIS 791 1_555 G ZN ZN . B ZN 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.158 ? metalc ? metalc8 A NE2 HIS 1066 B HIS 795 1_555 G ZN ZN . B ZN 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.123 ? metalc ? metalc9 B NE2 HIS 834 A HIS 563 1_555 J ZN ZN . A ZN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.271 ? metalc ? metalc10 B OD1 ASP 845 A ASP 574 1_555 J ZN ZN . A ZN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? metalc ? metalc11 B OD2 ASP 845 A ASP 574 1_555 J ZN ZN . A ZN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.482 ? metalc ? metalc12 B NE2 HIS 1062 A HIS 791 1_555 J ZN ZN . A ZN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? metalc ? metalc13 B NE2 HIS 1066 A HIS 795 1_555 J ZN ZN . A ZN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.129 ? # _chem_comp.formula 'C18 H34 O2' _chem_comp.formula_weight 282.461 _chem_comp.id OLA _chem_comp.mon_nstd_flag . _chem_comp.name 'OLEIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 OLA doub 314 n n C1 O2 OLA sing 315 n n C1 C2 OLA sing 316 n n O2 HO2 OLA sing 317 n n C2 C3 OLA sing 318 n n C2 H21 OLA sing 319 n n C2 H22 OLA sing 320 n n C3 C4 OLA sing 321 n n C3 H31 OLA sing 322 n n C3 H32 OLA sing 323 n n C4 C5 OLA sing 324 n n C4 H41 OLA sing 325 n n C4 H42 OLA sing 326 n n C5 C6 OLA sing 327 n n C5 H51 OLA sing 328 n n C5 H52 OLA sing 329 n n C6 C7 OLA sing 330 n n C6 H61 OLA sing 331 n n C6 H62 OLA sing 332 n n C7 C8 OLA sing 333 n n C7 H71 OLA sing 334 n n C7 H72 OLA sing 335 n n C8 C9 OLA sing 336 n n C8 H81 OLA sing 337 n n C8 H82 OLA sing 338 n n C9 C10 OLA doub 339 z n C9 H9 OLA sing 340 n n C10 C11 OLA sing 341 n n C10 H10 OLA sing 342 n n C11 C12 OLA sing 343 n n C11 H111 OLA sing 344 n n C11 H112 OLA sing 345 n n C12 C13 OLA sing 346 n n C12 H121 OLA sing 347 n n C12 H122 OLA sing 348 n n C13 C14 OLA sing 349 n n C13 H131 OLA sing 350 n n C13 H132 OLA sing 351 n n C14 C15 OLA sing 352 n n C14 H141 OLA sing 353 n n C14 H142 OLA sing 354 n n C15 C16 OLA sing 355 n n C15 H151 OLA sing 356 n n C15 H152 OLA sing 357 n n C16 C17 OLA sing 358 n n C16 H161 OLA sing 359 n n C16 H162 OLA sing 360 n n C17 C18 OLA sing 361 n n C17 H171 OLA sing 362 n n C17 H172 OLA sing 363 n n C18 H181 OLA sing 364 n n C18 H182 OLA sing 365 n n C18 H183 OLA sing 366 n n # _atom_sites.entry_id 8J6M _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CLR B 1 901 907 CLR CLR . D 2 CLR B 1 902 908 CLR CLR . E 2 CLR B 1 903 909 CLR CLR . F 2 CLR B 1 904 910 CLR CLR . G 3 ZN B 1 905 1 ZN ZN . H 4 NA B 1 906 1 NA NA . I 5 OLA B 1 907 901 OLA OLA . J 3 ZN A 1 901 2 ZN ZN . K 2 CLR A 1 902 907 CLR CLR . L 2 CLR A 1 903 908 CLR CLR . M 2 CLR A 1 904 909 CLR CLR . N 2 CLR A 1 905 910 CLR CLR . O 5 OLA A 1 906 901 OLA OLA . P 6 HOH B 1 1001 2 HOH HOH . P 6 HOH B 2 1002 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 OLA . . . O 5 152.022 149.729 166.366 1 71.5 ? C1 OLA 906 A 1 HETATM 2 O O1 OLA . . . O 5 151.337 149.202 165.464 1 69.62 ? O1 OLA 906 A 1 HETATM 3 O O2 OLA . . . O 5 152.155 150.971 166.378 1 68.35 ? O2 OLA 906 A 1 HETATM 4 C C2 OLA . . . O 5 152.677 148.878 167.426 1 69.65 ? C2 OLA 906 A 1 HETATM 5 C C3 OLA . . . O 5 153.198 147.59 166.801 1 70.88 ? C3 OLA 906 A 1 HETATM 6 C C4 OLA . . . O 5 152.802 146.39 167.651 1 70.42 ? C4 OLA 906 A 1 HETATM 7 C C5 OLA . . . O 5 153.456 145.101 167.16 1 70.29 ? C5 OLA 906 A 1 HETATM 8 C C6 OLA . . . O 5 154.695 144.71 167.962 1 70.26 ? C6 OLA 906 A 1 HETATM 9 C C7 OLA . . . O 5 154.751 145.339 169.352 1 70.2 ? C7 OLA 906 A 1 HETATM 10 C C8 OLA . . . O 5 153.993 144.508 170.383 1 68.08 ? C8 OLA 906 A 1 HETATM 11 C C9 OLA . . . O 5 154.564 144.763 171.756 1 68.85 ? C9 OLA 906 A 1 HETATM 12 C C10 OLA . . . O 5 153.891 144.224 172.946 1 69.54 ? C10 OLA 906 A 1 HETATM 13 C C11 OLA . . . O 5 152.545 144.769 173.364 1 70.97 ? C11 OLA 906 A 1 HETATM 14 C C12 OLA . . . O 5 151.884 143.8 174.336 1 69.61 ? C12 OLA 906 A 1 HETATM 15 C C13 OLA . . . O 5 150.808 144.494 175.163 1 69.93 ? C13 OLA 906 A 1 HETATM 16 C C14 OLA . . . O 5 150.62 143.795 176.504 1 69.53 ? C14 OLA 906 A 1 HETATM 17 C C15 OLA . . . O 5 149.474 144.423 177.285 1 67.49 ? C15 OLA 906 A 1 HETATM 18 C C16 OLA . . . O 5 149.317 143.792 178.663 1 72.43 ? C16 OLA 906 A 1 HETATM 19 C C17 OLA . . . O 5 149.157 142.281 178.565 1 69.38 ? C17 OLA 906 A 1 HETATM 20 C C18 OLA . . . O 5 148.787 141.688 179.919 1 66.28 ? C18 OLA 906 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 400 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 20 #