data_8J6R
#
_model_server_result.job_id            Qttwcv7d3F9A3oz8pq-QPQ 
_model_server_result.datetime_utc      '2024-10-11 00:24:28' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8j6r 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":401}' 
#
_entry.id    8J6R 
#
_exptl.entry_id    8J6R 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              386.402 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '2-[[2,2-dimethyl-3-[3-(5-oxidanylpyridin-2-yl)-1,2,4-oxadiazol-5-yl]propanoyl]amino]cyclohexene-1-carboxylic acid' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8J6R 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8J6R 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    pentameric 
_pdbx_struct_assembly.oligomeric_count      5 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      6 
_struct_asym.id                             F 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 D SG CYS 22 S CYS 22 1_555 D SG CYS 96 S CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
disulf ? disulf2 D SG CYS 159 S CYS 159 1_555 D SG CYS 229 S CYS 229 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
disulf ? disulf3 E SG CYS 11 R CYS 18 1_555 E SG CYS 176 R CYS 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
disulf ? disulf4 E SG CYS 12 R CYS 19 1_555 E SG CYS 259 R CYS 266 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf5 E SG CYS 93 R CYS 100 1_555 E SG CYS 170 R CYS 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? 
covale ? covale1 E ND2 ASN 10 R ASN 17 1_555 G C1 NAG . R NAG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.499 ? 
#
_chem_comp.formula           'C19 H22 N4 O5' 
_chem_comp.formula_weight    386.402 
_chem_comp.id                FI7 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '2-[[2,2-dimethyl-3-[3-(5-oxidanylpyridin-2-yl)-1,2,4-oxadiazol-5-yl]propanoyl]amino]cyclohexene-1-carboxylic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C27 C28 FI7 sing 83 n n 
C27 C26 FI7 sing 84 n n 
C28 C20 FI7 sing 85 n n 
C26 C25 FI7 sing 86 n n 
C01 C02 FI7 sing 87 n n 
C20 N19 FI7 sing 88 n n 
C20 C21 FI7 doub 89 n n 
N19 C17 FI7 sing 90 n n 
C25 C21 FI7 sing 91 n n 
C21 C22 FI7 sing 92 n n 
C17 C02 FI7 sing 93 n n 
C17 O18 FI7 doub 94 n n 
C02 C03 FI7 sing 95 n n 
C02 C04 FI7 sing 96 n n 
C22 O23 FI7 doub 97 n n 
C22 O24 FI7 sing 98 n n 
O16 N15 FI7 sing 99 n y 
O16 C05 FI7 sing 100 n y 
C04 C05 FI7 sing 101 n n 
N15 C07 FI7 doub 102 n y 
C05 N06 FI7 doub 103 n y 
C07 N06 FI7 sing 104 n y 
C07 C08 FI7 sing 105 n n 
C09 C08 FI7 doub 106 n y 
C09 C10 FI7 sing 107 n y 
C08 N14 FI7 sing 108 n y 
C10 C11 FI7 doub 109 n y 
N14 C13 FI7 doub 110 n y 
C11 C13 FI7 sing 111 n y 
C11 O12 FI7 sing 112 n n 
C10 H1 FI7 sing 113 n n 
C13 H2 FI7 sing 114 n n 
C26 H5 FI7 sing 115 n n 
C26 H6 FI7 sing 116 n n 
C28 H7 FI7 sing 117 n n 
C28 H8 FI7 sing 118 n n 
C01 H9 FI7 sing 119 n n 
C01 H10 FI7 sing 120 n n 
C01 H11 FI7 sing 121 n n 
C03 H12 FI7 sing 122 n n 
C03 H13 FI7 sing 123 n n 
C03 H14 FI7 sing 124 n n 
C04 H15 FI7 sing 125 n n 
C04 H16 FI7 sing 126 n n 
C09 H17 FI7 sing 127 n n 
C25 H18 FI7 sing 128 n n 
C25 H19 FI7 sing 129 n n 
C27 H20 FI7 sing 130 n n 
C27 H21 FI7 sing 131 n n 
N19 H22 FI7 sing 132 n n 
O12 H23 FI7 sing 133 n n 
O24 H24 FI7 sing 134 n n 
#
_atom_sites.entry_id                     8J6R 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
F 6 FI7 R 1 401 1 FI7 MK6 . 
G 7 NAG R 1 402 201 NAG NAG . 
H 8 HOH R 1 501 401 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C10 FI7 . . . F 6 98.709 119.438 111.46 1 52.08 ? C10 FI7 401 R 1 
HETATM 2 C C13 FI7 . . . F 6 100.7 119.68 112.756 1 52.08 ? C13 FI7 401 R 1 
HETATM 3 C C17 FI7 . . . F 6 92.357 121.531 117.624 1 52.08 ? C17 FI7 401 R 1 
HETATM 4 C C20 FI7 . . . F 6 89.716 121.726 117.623 1 52.08 ? C20 FI7 401 R 1 
HETATM 5 C C21 FI7 . . . F 6 88.661 121.846 116.775 1 52.08 ? C21 FI7 401 R 1 
HETATM 6 C C22 FI7 . . . F 6 88.82 121.346 115.309 1 52.08 ? C22 FI7 401 R 1 
HETATM 7 C C26 FI7 . . . F 6 87.162 122.563 118.781 1 52.08 ? C26 FI7 401 R 1 
HETATM 8 C C28 FI7 . . . F 6 89.444 121.61 119.129 1 52.08 ? C28 FI7 401 R 1 
HETATM 9 C C01 FI7 . . . F 6 94.244 119.811 117.699 1 52.08 ? C01 FI7 401 R 1 
HETATM 10 C C02 FI7 . . . F 6 93.681 120.999 116.912 1 52.08 ? C02 FI7 401 R 1 
HETATM 11 C C03 FI7 . . . F 6 93.29 120.583 115.499 1 52.08 ? C03 FI7 401 R 1 
HETATM 12 C C04 FI7 . . . F 6 94.83 122.079 116.853 1 52.08 ? C04 FI7 401 R 1 
HETATM 13 C C05 FI7 . . . F 6 96.195 121.611 116.252 1 52.08 ? C05 FI7 401 R 1 
HETATM 14 C C07 FI7 . . . F 6 97.828 120.865 114.966 1 52.08 ? C07 FI7 401 R 1 
HETATM 15 C C08 FI7 . . . F 6 98.611 120.309 113.754 1 52.08 ? C08 FI7 401 R 1 
HETATM 16 C C09 FI7 . . . F 6 97.975 119.935 112.544 1 52.08 ? C09 FI7 401 R 1 
HETATM 17 C C11 FI7 . . . F 6 100.082 119.303 111.553 1 52.08 ? C11 FI7 401 R 1 
HETATM 18 C C25 FI7 . . . F 6 87.284 122.275 117.262 1 52.08 ? C25 FI7 401 R 1 
HETATM 19 C C27 FI7 . . . F 6 87.953 121.519 119.545 1 52.08 ? C27 FI7 401 R 1 
HETATM 20 N N06 FI7 . . . F 6 96.428 121.151 115.026 1 52.08 ? N06 FI7 401 R 1 
HETATM 21 N N14 FI7 . . . F 6 99.98 120.166 113.819 1 52.08 ? N14 FI7 401 R 1 
HETATM 22 N N15 FI7 . . . F 6 98.377 121.179 116.17 1 52.08 ? N15 FI7 401 R 1 
HETATM 23 N N19 FI7 . . . F 6 91.05 121.319 117.111 1 52.08 ? N19 FI7 401 R 1 
HETATM 24 O O12 FI7 . . . F 6 100.84 118.807 110.474 1 52.08 ? O12 FI7 401 R 1 
HETATM 25 O O16 FI7 . . . F 6 97.382 121.654 117.004 1 52.08 ? O16 FI7 401 R 1 
HETATM 26 O O18 FI7 . . . F 6 92.537 122.152 118.683 1 52.08 ? O18 FI7 401 R 1 
HETATM 27 O O23 FI7 . . . F 6 87.917 121.652 114.457 1 52.08 ? O23 FI7 401 R 1 
HETATM 28 O O24 FI7 . . . F 6 89.841 120.631 114.96 1 52.08 ? O24 FI7 401 R 1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           309 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           28 
#