data_8J78 # _model_server_result.job_id 4RUuqfKrFFm8sNcojYq2QQ _model_server_result.datetime_utc '2025-01-02 16:19:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8j78 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":800}' # _entry.id 8J78 # _exptl.entry_id 8J78 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 228.311 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-(HEXAHYDRO-2-OXO-1H-THIENO[3,4-D]IMIDAZOL-6-YL)PENTANAL _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details 12-meric _pdbx_struct_assembly.oligomeric_count 12 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 M N N ? 3 N N N ? 3 O N N ? 3 P N N ? 3 Q N N ? 3 R N N # _chem_comp.formula 'C10 H16 N2 O2 S' _chem_comp.formula_weight 228.311 _chem_comp.id BTI _chem_comp.mon_nstd_flag . _chem_comp.name 5-(HEXAHYDRO-2-OXO-1H-THIENO[3,4-D]IMIDAZOL-6-YL)PENTANAL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C11 O11 BTI doub 70 n n C11 C10 BTI sing 71 n n C11 H11 BTI sing 72 n n C10 C9 BTI sing 73 n n C10 H102 BTI sing 74 n n C10 H103 BTI sing 75 n n C9 C8 BTI sing 76 n n C9 H92 BTI sing 77 n n C9 H93 BTI sing 78 n n C8 C7 BTI sing 79 n n C8 H82 BTI sing 80 n n C8 H83 BTI sing 81 n n C7 C2 BTI sing 82 n n C7 H72 BTI sing 83 n n C7 H73 BTI sing 84 n n C2 S1 BTI sing 85 n n C2 C4 BTI sing 86 n n C2 H2 BTI sing 87 n n S1 C6 BTI sing 88 n n C6 C5 BTI sing 89 n n C6 H62 BTI sing 90 n n C6 H63 BTI sing 91 n n C5 N3 BTI sing 92 n n C5 C4 BTI sing 93 n n C5 H5 BTI sing 94 n n N3 C3 BTI sing 95 n n N3 HN3 BTI sing 96 n n C3 O3 BTI doub 97 n n C3 N2 BTI sing 98 n n N2 C4 BTI sing 99 n n N2 HN2 BTI sing 100 n n C4 H4 BTI sing 101 n n # _atom_sites.entry_id 8J78 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 3 BTI I 1 800 800 BTI BTI . N 3 BTI K 1 801 801 BTI BTI . O 3 BTI C 1 800 800 BTI BTI . P 3 BTI B 1 801 801 BTI BTI . Q 3 BTI E 1 801 801 BTI BTI . R 3 BTI G 1 801 801 BTI BTI . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C11 BTI . . . M 3 149.268 180.788 221.977 1 50.14 ? C11 BTI 800 I 1 HETATM 2 O O11 BTI . . . M 3 149.199 179.822 221.199 1 51.49 ? O11 BTI 800 I 1 HETATM 3 C C10 BTI . . . M 3 150.509 181.57 222.26 1 47.44 ? C10 BTI 800 I 1 HETATM 4 C C9 BTI . . . M 3 151.582 180.725 222.94 1 47.32 ? C9 BTI 800 I 1 HETATM 5 C C8 BTI . . . M 3 151.77 179.365 222.285 1 45.46 ? C8 BTI 800 I 1 HETATM 6 C C7 BTI . . . M 3 152.075 179.472 220.793 1 42.73 ? C7 BTI 800 I 1 HETATM 7 C C2 BTI . . . M 3 153.212 178.568 220.367 1 38.56 ? C2 BTI 800 I 1 HETATM 8 S S1 BTI . . . M 3 154.811 179.053 221.083 1 48.75 ? S1 BTI 800 I 1 HETATM 9 C C6 BTI . . . M 3 155.593 177.842 219.994 1 45.06 ? C6 BTI 800 I 1 HETATM 10 C C5 BTI . . . M 3 154.939 178.045 218.628 1 46.16 ? C5 BTI 800 I 1 HETATM 11 N N3 BTI . . . M 3 155.521 179.136 217.899 1 46.36 ? N3 BTI 800 I 1 HETATM 12 C C3 BTI . . . M 3 154.674 180.164 217.677 1 46.47 ? C3 BTI 800 I 1 HETATM 13 O O3 BTI . . . M 3 154.928 181.199 217.087 1 42.74 ? O3 BTI 800 I 1 HETATM 14 N N2 BTI . . . M 3 153.485 179.818 218.231 1 45.62 ? N2 BTI 800 I 1 HETATM 15 C C4 BTI . . . M 3 153.478 178.524 218.859 1 43.57 ? C4 BTI 800 I 1 HETATM 16 H H11 BTI . . . M 3 148.508 181.365 221.877 1 46.93 ? H11 BTI 800 I 1 HETATM 17 H H102 BTI . . . M 3 150.286 182.33 222.841 1 47.13 ? H102 BTI 800 I 1 HETATM 18 H H103 BTI . . . M 3 150.857 181.933 221.422 1 47.15 ? H103 BTI 800 I 1 HETATM 19 H H92 BTI . . . M 3 151.38 180.611 223.886 1 46.56 ? H92 BTI 800 I 1 HETATM 20 H H93 BTI . . . M 3 152.432 181.208 222.887 1 47.65 ? H93 BTI 800 I 1 HETATM 21 H H82 BTI . . . M 3 150.995 178.797 222.434 1 46.48 ? H82 BTI 800 I 1 HETATM 22 H H83 BTI . . . M 3 152.532 178.924 222.72 1 47.43 ? H83 BTI 800 I 1 HETATM 23 H H72 BTI . . . M 3 152.32 180.404 220.571 1 46.8 ? H72 BTI 800 I 1 HETATM 24 H H73 BTI . . . M 3 151.287 179.224 220.256 1 46.79 ? H73 BTI 800 I 1 HETATM 25 H H2 BTI . . . M 3 153.006 177.65 220.674 1 47.28 ? H2 BTI 800 I 1 HETATM 26 H H62 BTI . . . M 3 155.431 176.937 220.309 1 47.18 ? H62 BTI 800 I 1 HETATM 27 H H63 BTI . . . M 3 156.551 177.995 219.94 1 47.96 ? H63 BTI 800 I 1 HETATM 28 H H5 BTI . . . M 3 154.959 177.208 218.095 1 47.57 ? H5 BTI 800 I 1 HETATM 29 H HN3 BTI . . . M 3 156.34 179.152 217.619 1 47.2 ? HN3 BTI 800 I 1 HETATM 30 H HN2 BTI . . . M 3 152.796 180.34 218.189 1 47.13 ? HN2 BTI 800 I 1 HETATM 31 H H4 BTI . . . M 3 152.837 177.917 218.408 1 47.62 ? H4 BTI 800 I 1 # _model_server_stats.io_time_ms 24 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 164 _model_server_stats.query_time_ms 512 _model_server_stats.encode_time_ms 36 _model_server_stats.element_count 31 #