data_8J8W # _model_server_result.job_id p_y9Ql2IoLXSfNS6ks8qbA _model_server_result.datetime_utc '2024-11-09 02:15:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8j8w # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 8J8W # _exptl.entry_id 8J8W _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 58.933 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COBALT (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.64 _cell.angle_gamma 90 _cell.entry_id 8J8W _cell.length_a 77.307 _cell.length_b 83.872 _cell.length_c 62.897 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8J8W _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_557 -x,y,-z+2 -1 0 0 0 1 0 0 0 -1 -23.226293 0 123.631184 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 373 A CYS 401 1_555 A SG CYS 388 A CYS 416 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? metalc ? metalc1 A NE2 HIS 198 A HIS 226 1_555 B CO CO . A CO 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? metalc ? metalc2 A NE2 HIS 280 A HIS 308 1_555 B CO CO . A CO 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? metalc ? metalc3 A OE1 GLU 366 A GLU 394 1_555 B CO CO . A CO 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? metalc ? metalc4 B CO CO . A CO 501 1_555 C O8 U5D . A U5D 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? metalc ? metalc5 B CO CO . A CO 501 1_555 C O22 U5D . A U5D 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? metalc ? metalc6 B CO CO . A CO 501 1_555 D O HOH . A HOH 659 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.166 ? # _chem_comp.formula 'Co 2' _chem_comp.formula_weight 58.933 _chem_comp.id CO _chem_comp.mon_nstd_flag . _chem_comp.name 'COBALT (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8J8W _atom_sites.fract_transf_matrix[1][1] 0.012935 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002431 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011923 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016177 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CO A 1 501 1 CO CO . C 3 U5D A 1 502 501 U5D LIG . D 4 HOH A 1 601 172 HOH HOH . D 4 HOH A 2 602 50 HOH HOH . D 4 HOH A 3 603 130 HOH HOH . D 4 HOH A 4 604 141 HOH HOH . D 4 HOH A 5 605 54 HOH HOH . D 4 HOH A 6 606 139 HOH HOH . D 4 HOH A 7 607 20 HOH HOH . D 4 HOH A 8 608 146 HOH HOH . D 4 HOH A 9 609 113 HOH HOH . D 4 HOH A 10 610 98 HOH HOH . D 4 HOH A 11 611 151 HOH HOH . D 4 HOH A 12 612 105 HOH HOH . D 4 HOH A 13 613 15 HOH HOH . D 4 HOH A 14 614 59 HOH HOH . D 4 HOH A 15 615 95 HOH HOH . D 4 HOH A 16 616 61 HOH HOH . D 4 HOH A 17 617 114 HOH HOH . D 4 HOH A 18 618 4 HOH HOH . D 4 HOH A 19 619 66 HOH HOH . D 4 HOH A 20 620 84 HOH HOH . D 4 HOH A 21 621 67 HOH HOH . D 4 HOH A 22 622 142 HOH HOH . D 4 HOH A 23 623 27 HOH HOH . D 4 HOH A 24 624 58 HOH HOH . D 4 HOH A 25 626 49 HOH HOH . D 4 HOH A 26 627 169 HOH HOH . D 4 HOH A 27 628 78 HOH HOH . D 4 HOH A 28 629 145 HOH HOH . D 4 HOH A 29 630 55 HOH HOH . D 4 HOH A 30 631 24 HOH HOH . D 4 HOH A 31 632 185 HOH HOH . D 4 HOH A 32 633 16 HOH HOH . D 4 HOH A 33 634 190 HOH HOH . D 4 HOH A 34 635 92 HOH HOH . D 4 HOH A 35 636 45 HOH HOH . D 4 HOH A 36 637 94 HOH HOH . D 4 HOH A 37 638 85 HOH HOH . D 4 HOH A 38 639 33 HOH HOH . D 4 HOH A 39 640 163 HOH HOH . D 4 HOH A 40 641 11 HOH HOH . D 4 HOH A 41 642 128 HOH HOH . D 4 HOH A 42 643 68 HOH HOH . D 4 HOH A 43 644 62 HOH HOH . D 4 HOH A 44 645 88 HOH HOH . D 4 HOH A 45 646 36 HOH HOH . D 4 HOH A 46 647 174 HOH HOH . D 4 HOH A 47 648 10 HOH HOH . D 4 HOH A 48 649 64 HOH HOH . D 4 HOH A 49 650 21 HOH HOH . D 4 HOH A 50 651 129 HOH HOH . D 4 HOH A 51 652 44 HOH HOH . D 4 HOH A 52 653 136 HOH HOH . D 4 HOH A 53 654 96 HOH HOH . D 4 HOH A 54 655 81 HOH HOH . D 4 HOH A 55 656 63 HOH HOH . D 4 HOH A 56 657 86 HOH HOH . D 4 HOH A 57 658 42 HOH HOH . D 4 HOH A 58 659 1 HOH HOH . D 4 HOH A 59 660 56 HOH HOH . D 4 HOH A 60 661 150 HOH HOH . D 4 HOH A 61 662 133 HOH HOH . D 4 HOH A 62 663 5 HOH HOH . D 4 HOH A 63 664 123 HOH HOH . D 4 HOH A 64 665 162 HOH HOH . D 4 HOH A 65 666 173 HOH HOH . D 4 HOH A 66 667 175 HOH HOH . D 4 HOH A 67 668 110 HOH HOH . D 4 HOH A 68 669 53 HOH HOH . D 4 HOH A 69 670 187 HOH HOH . D 4 HOH A 70 671 101 HOH HOH . D 4 HOH A 71 672 35 HOH HOH . D 4 HOH A 72 673 30 HOH HOH . D 4 HOH A 73 674 40 HOH HOH . D 4 HOH A 74 675 71 HOH HOH . D 4 HOH A 75 676 25 HOH HOH . D 4 HOH A 76 677 19 HOH HOH . D 4 HOH A 77 678 149 HOH HOH . D 4 HOH A 78 679 7 HOH HOH . D 4 HOH A 79 680 176 HOH HOH . D 4 HOH A 80 681 121 HOH HOH . D 4 HOH A 81 682 171 HOH HOH . D 4 HOH A 82 683 65 HOH HOH . D 4 HOH A 83 684 116 HOH HOH . D 4 HOH A 84 685 106 HOH HOH . D 4 HOH A 85 686 77 HOH HOH . D 4 HOH A 86 687 109 HOH HOH . D 4 HOH A 87 688 18 HOH HOH . D 4 HOH A 88 689 72 HOH HOH . D 4 HOH A 89 690 48 HOH HOH . D 4 HOH A 90 691 127 HOH HOH . D 4 HOH A 91 692 119 HOH HOH . D 4 HOH A 92 693 26 HOH HOH . D 4 HOH A 93 694 131 HOH HOH . D 4 HOH A 94 695 76 HOH HOH . D 4 HOH A 95 696 37 HOH HOH . D 4 HOH A 96 697 120 HOH HOH . D 4 HOH A 97 698 9 HOH HOH . D 4 HOH A 98 699 168 HOH HOH . D 4 HOH A 99 700 97 HOH HOH . D 4 HOH A 100 701 3 HOH HOH . D 4 HOH A 101 702 52 HOH HOH . D 4 HOH A 102 703 82 HOH HOH . D 4 HOH A 103 704 182 HOH HOH . D 4 HOH A 104 705 124 HOH HOH . D 4 HOH A 105 706 23 HOH HOH . D 4 HOH A 106 707 87 HOH HOH . D 4 HOH A 107 708 34 HOH HOH . D 4 HOH A 108 709 47 HOH HOH . D 4 HOH A 109 710 70 HOH HOH . D 4 HOH A 110 711 57 HOH HOH . D 4 HOH A 111 712 93 HOH HOH . D 4 HOH A 112 713 79 HOH HOH . D 4 HOH A 113 714 191 HOH HOH . D 4 HOH A 114 715 12 HOH HOH . D 4 HOH A 115 716 22 HOH HOH . D 4 HOH A 116 717 178 HOH HOH . D 4 HOH A 117 718 13 HOH HOH . D 4 HOH A 118 719 6 HOH HOH . D 4 HOH A 119 720 108 HOH HOH . D 4 HOH A 120 721 177 HOH HOH . D 4 HOH A 121 722 144 HOH HOH . D 4 HOH A 122 723 134 HOH HOH . D 4 HOH A 123 724 83 HOH HOH . D 4 HOH A 124 725 43 HOH HOH . D 4 HOH A 125 726 186 HOH HOH . D 4 HOH A 126 727 90 HOH HOH . D 4 HOH A 127 728 164 HOH HOH . D 4 HOH A 128 729 28 HOH HOH . D 4 HOH A 129 730 14 HOH HOH . D 4 HOH A 130 731 135 HOH HOH . D 4 HOH A 131 732 111 HOH HOH . D 4 HOH A 132 733 75 HOH HOH . D 4 HOH A 133 734 170 HOH HOH . D 4 HOH A 134 735 46 HOH HOH . D 4 HOH A 135 736 115 HOH HOH . D 4 HOH A 136 737 38 HOH HOH . D 4 HOH A 137 738 41 HOH HOH . D 4 HOH A 138 739 137 HOH HOH . D 4 HOH A 139 740 17 HOH HOH . D 4 HOH A 140 741 188 HOH HOH . D 4 HOH A 141 742 107 HOH HOH . D 4 HOH A 142 743 74 HOH HOH . D 4 HOH A 143 744 8 HOH HOH . D 4 HOH A 144 745 60 HOH HOH . D 4 HOH A 145 746 102 HOH HOH . D 4 HOH A 146 747 73 HOH HOH . D 4 HOH A 147 748 103 HOH HOH . D 4 HOH A 148 749 32 HOH HOH . D 4 HOH A 149 750 152 HOH HOH . D 4 HOH A 150 751 69 HOH HOH . D 4 HOH A 151 752 183 HOH HOH . D 4 HOH A 152 753 117 HOH HOH . D 4 HOH A 153 754 153 HOH HOH . D 4 HOH A 154 755 39 HOH HOH . D 4 HOH A 155 756 181 HOH HOH . D 4 HOH A 156 757 161 HOH HOH . D 4 HOH A 157 758 157 HOH HOH . D 4 HOH A 158 759 158 HOH HOH . D 4 HOH A 159 760 165 HOH HOH . D 4 HOH A 160 761 31 HOH HOH . D 4 HOH A 161 762 91 HOH HOH . D 4 HOH A 162 763 99 HOH HOH . D 4 HOH A 163 764 159 HOH HOH . D 4 HOH A 164 765 118 HOH HOH . D 4 HOH A 165 766 126 HOH HOH . D 4 HOH A 166 767 140 HOH HOH . D 4 HOH A 167 768 51 HOH HOH . D 4 HOH A 168 769 132 HOH HOH . D 4 HOH A 169 770 2 HOH HOH . D 4 HOH A 170 771 147 HOH HOH . D 4 HOH A 171 772 100 HOH HOH . D 4 HOH A 172 773 155 HOH HOH . D 4 HOH A 173 774 154 HOH HOH . D 4 HOH A 174 775 112 HOH HOH . D 4 HOH A 175 776 179 HOH HOH . D 4 HOH A 176 777 189 HOH HOH . D 4 HOH A 177 778 143 HOH HOH . D 4 HOH A 178 779 180 HOH HOH . D 4 HOH A 179 780 125 HOH HOH . D 4 HOH A 180 781 104 HOH HOH . D 4 HOH A 181 782 122 HOH HOH . D 4 HOH A 182 783 156 HOH HOH . D 4 HOH A 183 784 29 HOH HOH . D 4 HOH A 184 785 167 HOH HOH . D 4 HOH A 185 786 80 HOH HOH . D 4 HOH A 186 787 184 HOH HOH . D 4 HOH A 187 788 89 HOH HOH . D 4 HOH A 188 789 148 HOH HOH . D 4 HOH A 189 790 138 HOH HOH . D 4 HOH A 190 791 166 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CO _atom_site.label_atom_id CO _atom_site.label_comp_id CO _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 3.903 _atom_site.Cartn_y -2.617 _atom_site.Cartn_z 80.556 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 23.76 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CO _atom_site.auth_comp_id CO _atom_site.auth_seq_id 501 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #