data_8JA2 # _model_server_result.job_id o0SIhgbnf3TmX4zfW2xvZg _model_server_result.datetime_utc '2025-07-01 23:15:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ja2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 8JA2 # _exptl.entry_id 8JA2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8JA2 _cell.length_a 85.921 _cell.length_b 85.921 _cell.length_c 212.01 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8JA2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall 'P 61 2 (x,y,z+5/12)' _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_555 x-y,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASN 64 A ASN 64 1_555 B MG MG . A MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? metalc ? metalc2 B MG MG . A MG 501 1_555 C O1A ANP . A ANP 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? metalc ? metalc3 B MG MG . A MG 501 1_555 C O2G ANP . A ANP 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2 ? metalc ? metalc4 B MG MG . A MG 501 1_555 C O1B ANP . A ANP 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? metalc ? metalc5 B MG MG . A MG 501 1_555 D O HOH . A HOH 615 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.119 ? metalc ? metalc6 B MG MG . A MG 501 1_555 D O HOH . A HOH 731 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8JA2 _atom_sites.fract_transf_matrix[1][1] 0.011639 _atom_sites.fract_transf_matrix[1][2] 0.00672 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013439 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004717 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 501 410 MG MG . C 3 ANP A 1 502 410 ANP ANP . D 4 HOH A 1 601 549 HOH HOH . D 4 HOH A 2 602 519 HOH HOH . D 4 HOH A 3 603 486 HOH HOH . D 4 HOH A 4 604 636 HOH HOH . D 4 HOH A 5 605 521 HOH HOH . D 4 HOH A 6 606 595 HOH HOH . D 4 HOH A 7 607 545 HOH HOH . D 4 HOH A 8 608 498 HOH HOH . D 4 HOH A 9 609 596 HOH HOH . D 4 HOH A 10 610 548 HOH HOH . D 4 HOH A 11 611 609 HOH HOH . D 4 HOH A 12 612 517 HOH HOH . D 4 HOH A 13 613 617 HOH HOH . D 4 HOH A 14 614 634 HOH HOH . D 4 HOH A 15 615 411 HOH HOH . D 4 HOH A 16 616 615 HOH HOH . D 4 HOH A 17 617 496 HOH HOH . D 4 HOH A 18 618 524 HOH HOH . D 4 HOH A 19 619 607 HOH HOH . D 4 HOH A 20 620 449 HOH HOH . D 4 HOH A 21 621 584 HOH HOH . D 4 HOH A 22 622 461 HOH HOH . D 4 HOH A 23 623 435 HOH HOH . D 4 HOH A 24 624 551 HOH HOH . D 4 HOH A 25 625 465 HOH HOH . D 4 HOH A 26 626 589 HOH HOH . D 4 HOH A 27 627 416 HOH HOH . D 4 HOH A 28 628 505 HOH HOH . D 4 HOH A 29 629 538 HOH HOH . D 4 HOH A 30 630 440 HOH HOH . D 4 HOH A 31 631 529 HOH HOH . D 4 HOH A 32 632 441 HOH HOH . D 4 HOH A 33 633 525 HOH HOH . D 4 HOH A 34 634 501 HOH HOH . D 4 HOH A 35 635 560 HOH HOH . D 4 HOH A 36 636 479 HOH HOH . D 4 HOH A 37 637 535 HOH HOH . D 4 HOH A 38 638 557 HOH HOH . D 4 HOH A 39 639 462 HOH HOH . D 4 HOH A 40 640 436 HOH HOH . D 4 HOH A 41 641 611 HOH HOH . D 4 HOH A 42 642 445 HOH HOH . D 4 HOH A 43 643 532 HOH HOH . D 4 HOH A 44 644 603 HOH HOH . D 4 HOH A 45 645 454 HOH HOH . D 4 HOH A 46 646 468 HOH HOH . D 4 HOH A 47 647 534 HOH HOH . D 4 HOH A 48 648 426 HOH HOH . D 4 HOH A 49 649 428 HOH HOH . D 4 HOH A 50 650 433 HOH HOH . D 4 HOH A 51 651 608 HOH HOH . D 4 HOH A 52 652 564 HOH HOH . D 4 HOH A 53 653 627 HOH HOH . D 4 HOH A 54 654 438 HOH HOH . D 4 HOH A 55 655 533 HOH HOH . D 4 HOH A 56 656 457 HOH HOH . D 4 HOH A 57 657 504 HOH HOH . D 4 HOH A 58 658 431 HOH HOH . D 4 HOH A 59 659 424 HOH HOH . D 4 HOH A 60 660 576 HOH HOH . D 4 HOH A 61 661 490 HOH HOH . D 4 HOH A 62 662 585 HOH HOH . D 4 HOH A 63 663 478 HOH HOH . D 4 HOH A 64 664 466 HOH HOH . D 4 HOH A 65 665 511 HOH HOH . D 4 HOH A 66 666 619 HOH HOH . D 4 HOH A 67 667 419 HOH HOH . D 4 HOH A 68 668 583 HOH HOH . D 4 HOH A 69 669 586 HOH HOH . D 4 HOH A 70 670 487 HOH HOH . D 4 HOH A 71 671 590 HOH HOH . D 4 HOH A 72 672 494 HOH HOH . D 4 HOH A 73 673 448 HOH HOH . D 4 HOH A 74 674 556 HOH HOH . D 4 HOH A 75 675 503 HOH HOH . D 4 HOH A 76 676 507 HOH HOH . D 4 HOH A 77 677 420 HOH HOH . D 4 HOH A 78 678 493 HOH HOH . D 4 HOH A 79 679 472 HOH HOH . D 4 HOH A 80 680 474 HOH HOH . D 4 HOH A 81 681 485 HOH HOH . D 4 HOH A 82 682 540 HOH HOH . D 4 HOH A 83 683 469 HOH HOH . D 4 HOH A 84 684 614 HOH HOH . D 4 HOH A 85 685 429 HOH HOH . D 4 HOH A 86 686 458 HOH HOH . D 4 HOH A 87 687 597 HOH HOH . D 4 HOH A 88 688 418 HOH HOH . D 4 HOH A 89 689 413 HOH HOH . D 4 HOH A 90 690 432 HOH HOH . D 4 HOH A 91 691 605 HOH HOH . D 4 HOH A 92 692 439 HOH HOH . D 4 HOH A 93 693 567 HOH HOH . D 4 HOH A 94 694 563 HOH HOH . D 4 HOH A 95 695 423 HOH HOH . D 4 HOH A 96 696 509 HOH HOH . D 4 HOH A 97 697 427 HOH HOH . D 4 HOH A 98 698 415 HOH HOH . D 4 HOH A 99 699 488 HOH HOH . D 4 HOH A 100 700 520 HOH HOH . D 4 HOH A 101 701 463 HOH HOH . D 4 HOH A 102 702 526 HOH HOH . D 4 HOH A 103 703 450 HOH HOH . D 4 HOH A 104 704 459 HOH HOH . D 4 HOH A 105 705 575 HOH HOH . D 4 HOH A 106 706 613 HOH HOH . D 4 HOH A 107 707 417 HOH HOH . D 4 HOH A 108 708 467 HOH HOH . D 4 HOH A 109 709 443 HOH HOH . D 4 HOH A 110 710 555 HOH HOH . D 4 HOH A 111 711 628 HOH HOH . D 4 HOH A 112 712 499 HOH HOH . D 4 HOH A 113 713 508 HOH HOH . D 4 HOH A 114 714 481 HOH HOH . D 4 HOH A 115 715 577 HOH HOH . D 4 HOH A 116 716 447 HOH HOH . D 4 HOH A 117 717 518 HOH HOH . D 4 HOH A 118 718 626 HOH HOH . D 4 HOH A 119 719 632 HOH HOH . D 4 HOH A 120 720 537 HOH HOH . D 4 HOH A 121 721 541 HOH HOH . D 4 HOH A 122 722 582 HOH HOH . D 4 HOH A 123 723 453 HOH HOH . D 4 HOH A 124 724 464 HOH HOH . D 4 HOH A 125 725 491 HOH HOH . D 4 HOH A 126 726 512 HOH HOH . D 4 HOH A 127 727 484 HOH HOH . D 4 HOH A 128 728 437 HOH HOH . D 4 HOH A 129 729 572 HOH HOH . D 4 HOH A 130 730 430 HOH HOH . D 4 HOH A 131 731 412 HOH HOH . D 4 HOH A 132 732 569 HOH HOH . D 4 HOH A 133 733 578 HOH HOH . D 4 HOH A 134 734 421 HOH HOH . D 4 HOH A 135 735 414 HOH HOH . D 4 HOH A 136 736 562 HOH HOH . D 4 HOH A 137 737 552 HOH HOH . D 4 HOH A 138 738 566 HOH HOH . D 4 HOH A 139 739 444 HOH HOH . D 4 HOH A 140 740 477 HOH HOH . D 4 HOH A 141 741 629 HOH HOH . D 4 HOH A 142 742 625 HOH HOH . D 4 HOH A 143 743 452 HOH HOH . D 4 HOH A 144 744 460 HOH HOH . D 4 HOH A 145 745 544 HOH HOH . D 4 HOH A 146 746 599 HOH HOH . D 4 HOH A 147 747 442 HOH HOH . D 4 HOH A 148 748 594 HOH HOH . D 4 HOH A 149 749 598 HOH HOH . D 4 HOH A 150 750 546 HOH HOH . D 4 HOH A 151 751 451 HOH HOH . D 4 HOH A 152 752 515 HOH HOH . D 4 HOH A 153 753 522 HOH HOH . D 4 HOH A 154 754 612 HOH HOH . D 4 HOH A 155 755 542 HOH HOH . D 4 HOH A 156 756 593 HOH HOH . D 4 HOH A 157 757 456 HOH HOH . D 4 HOH A 158 758 523 HOH HOH . D 4 HOH A 159 759 495 HOH HOH . D 4 HOH A 160 760 475 HOH HOH . D 4 HOH A 161 761 543 HOH HOH . D 4 HOH A 162 762 527 HOH HOH . D 4 HOH A 163 763 497 HOH HOH . D 4 HOH A 164 764 471 HOH HOH . D 4 HOH A 165 765 480 HOH HOH . D 4 HOH A 166 766 624 HOH HOH . D 4 HOH A 167 767 579 HOH HOH . D 4 HOH A 168 768 492 HOH HOH . D 4 HOH A 169 769 550 HOH HOH . D 4 HOH A 170 770 470 HOH HOH . D 4 HOH A 171 771 530 HOH HOH . D 4 HOH A 172 772 588 HOH HOH . D 4 HOH A 173 773 621 HOH HOH . D 4 HOH A 174 774 600 HOH HOH . D 4 HOH A 175 775 635 HOH HOH . D 4 HOH A 176 776 500 HOH HOH . D 4 HOH A 177 777 422 HOH HOH . D 4 HOH A 178 778 482 HOH HOH . D 4 HOH A 179 779 473 HOH HOH . D 4 HOH A 180 780 514 HOH HOH . D 4 HOH A 181 781 516 HOH HOH . D 4 HOH A 182 782 489 HOH HOH . D 4 HOH A 183 783 622 HOH HOH . D 4 HOH A 184 784 580 HOH HOH . D 4 HOH A 185 785 425 HOH HOH . D 4 HOH A 186 786 568 HOH HOH . D 4 HOH A 187 787 623 HOH HOH . D 4 HOH A 188 788 547 HOH HOH . D 4 HOH A 189 789 610 HOH HOH . D 4 HOH A 190 790 561 HOH HOH . D 4 HOH A 191 791 592 HOH HOH . D 4 HOH A 192 792 531 HOH HOH . D 4 HOH A 193 793 616 HOH HOH . D 4 HOH A 194 794 558 HOH HOH . D 4 HOH A 195 795 483 HOH HOH . D 4 HOH A 196 796 506 HOH HOH . D 4 HOH A 197 797 571 HOH HOH . D 4 HOH A 198 798 637 HOH HOH . D 4 HOH A 199 799 554 HOH HOH . D 4 HOH A 200 800 574 HOH HOH . D 4 HOH A 201 801 553 HOH HOH . D 4 HOH A 202 802 476 HOH HOH . D 4 HOH A 203 803 434 HOH HOH . D 4 HOH A 204 804 536 HOH HOH . D 4 HOH A 205 805 602 HOH HOH . D 4 HOH A 206 806 573 HOH HOH . D 4 HOH A 207 807 502 HOH HOH . D 4 HOH A 208 808 455 HOH HOH . D 4 HOH A 209 809 539 HOH HOH . D 4 HOH A 210 810 581 HOH HOH . D 4 HOH A 211 811 633 HOH HOH . D 4 HOH A 212 812 565 HOH HOH . D 4 HOH A 213 813 446 HOH HOH . D 4 HOH A 214 814 510 HOH HOH . D 4 HOH A 215 815 630 HOH HOH . D 4 HOH A 216 816 606 HOH HOH . D 4 HOH A 217 817 559 HOH HOH . D 4 HOH A 218 818 570 HOH HOH . D 4 HOH A 219 819 631 HOH HOH . D 4 HOH A 220 820 604 HOH HOH . D 4 HOH A 221 821 601 HOH HOH . D 4 HOH A 222 822 587 HOH HOH . D 4 HOH A 223 823 513 HOH HOH . D 4 HOH A 224 824 620 HOH HOH . D 4 HOH A 225 825 618 HOH HOH . D 4 HOH A 226 826 591 HOH HOH . D 4 HOH A 227 827 528 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x -23.31 _atom_site.Cartn_y -10.349 _atom_site.Cartn_z -8.631 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 12.56 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 501 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 26 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #