data_8JBC
#
_model_server_result.job_id            BndRb_5sF_sMVZYyA3FyvA 
_model_server_result.datetime_utc      '2024-10-10 01:20:52' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8jbc 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1001}' 
#
_entry.id    8JBC 
#
_exptl.entry_id    8JBC 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              58.693 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NICKEL (II) ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8JBC 
_cell.length_a            94.89 
_cell.length_b            205.57 
_cell.length_c            59.1 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8JBC 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    'P 2 2ab' 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 314 A HIS 310 1_555 C NI NI . A NI 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.246 ? 
metalc ? metalc2 A OE1 GLU 318 A GLU 314 1_555 C NI NI . A NI 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.597 ? 
metalc ? metalc3 B NE2 HIS 314 B HIS 310 1_555 D NI NI . B NI 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.688 ? 
metalc ? metalc4 B OE2 GLU 318 B GLU 314 1_555 D NI NI . B NI 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.48 ? 
metalc ? metalc5 B OE2 GLU 462 B GLU 458 1_555 D NI NI . B NI 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.676 ? 
#
_chem_comp.formula           'Ni 2' 
_chem_comp.formula_weight    58.693 
_chem_comp.id                NI 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NICKEL (II) ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     8JBC 
_atom_sites.fract_transf_matrix[1][1]    0.010539 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.004865 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01692 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 NI A 1 1001 1001 NI NI . 
D 2 NI B 1 1001 1001 NI NI . 
E 3 HOH A 1 1101 20 HOH HOH . 
E 3 HOH A 2 1102 34 HOH HOH . 
E 3 HOH A 3 1103 19 HOH HOH . 
E 3 HOH A 4 1104 15 HOH HOH . 
E 3 HOH A 5 1105 30 HOH HOH . 
E 3 HOH A 6 1106 26 HOH HOH . 
E 3 HOH A 7 1107 12 HOH HOH . 
E 3 HOH A 8 1108 17 HOH HOH . 
E 3 HOH A 9 1109 1 HOH HOH . 
E 3 HOH A 10 1110 13 HOH HOH . 
E 3 HOH A 11 1111 23 HOH HOH . 
E 3 HOH A 12 1112 27 HOH HOH . 
E 3 HOH A 13 1113 10 HOH HOH . 
E 3 HOH A 14 1114 8 HOH HOH . 
E 3 HOH A 15 1115 5 HOH HOH . 
E 3 HOH A 16 1116 4 HOH HOH . 
E 3 HOH A 17 1117 7 HOH HOH . 
E 3 HOH A 18 1118 11 HOH HOH . 
E 3 HOH A 19 1119 18 HOH HOH . 
E 3 HOH A 20 1120 35 HOH HOH . 
E 3 HOH A 21 1121 2 HOH HOH . 
E 3 HOH A 22 1122 6 HOH HOH . 
E 3 HOH A 23 1123 16 HOH HOH . 
F 3 HOH B 1 1101 24 HOH HOH . 
F 3 HOH B 2 1102 22 HOH HOH . 
F 3 HOH B 3 1103 32 HOH HOH . 
F 3 HOH B 4 1104 21 HOH HOH . 
F 3 HOH B 5 1105 29 HOH HOH . 
F 3 HOH B 6 1106 28 HOH HOH . 
F 3 HOH B 7 1107 9 HOH HOH . 
F 3 HOH B 8 1108 3 HOH HOH . 
F 3 HOH B 9 1109 33 HOH HOH . 
F 3 HOH B 10 1110 14 HOH HOH . 
F 3 HOH B 11 1111 25 HOH HOH . 
F 3 HOH B 12 1112 31 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NI 
_atom_site.label_atom_id         NI 
_atom_site.label_comp_id         NI 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               39.187 
_atom_site.Cartn_y               36.048 
_atom_site.Cartn_z               19.622 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        110.02 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NI 
_atom_site.auth_comp_id          NI 
_atom_site.auth_seq_id           1001 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              27 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           258 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           1 
#