data_8JBW # _model_server_result.job_id n5qmQkTP1-Aq8nF-6qefWg _model_server_result.datetime_utc '2024-11-26 10:17:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8jbw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":502}' # _entry.id 8JBW # _exptl.entry_id 8JBW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 344.315 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (9bR)-2,6-diethanoyl-8,9b-dimethyl-3,7,9-tris(oxidanyl)dibenzofuran-1-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8JBW _cell.length_a 110.348 _cell.length_b 110.348 _cell.length_c 80.849 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8JBW _symmetry.cell_setting ? _symmetry.Int_Tables_number 94 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 42 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 235 A CYS 235 1_555 A SG CYS 256 A CYS 256 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? metalc ? metalc1 A NE2 GLN 372 A GLN 372 1_555 B CO CO . A CO 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.69 ? metalc ? metalc2 A OE1 GLU 387 A GLU 387 1_555 B CO CO . A CO 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.837 ? metalc ? metalc3 A OE2 GLU 387 A GLU 387 1_555 B CO CO . A CO 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.27 ? metalc ? metalc4 B CO CO . A CO 501 1_555 C O14 AIY . A AIY 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.494 ? metalc ? metalc5 B CO CO . A CO 501 1_555 C O17 AIY . A AIY 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.174 ? # _chem_comp.formula 'C18 H16 O7' _chem_comp.formula_weight 344.315 _chem_comp.id AIY _chem_comp.mon_nstd_flag . _chem_comp.name (9bR)-2,6-diethanoyl-8,9b-dimethyl-3,7,9-tris(oxidanyl)dibenzofuran-1-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '(+)-Usnic acid;(+)-Usniacin' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O17 C15 AIY doub 1 n n O14 C4 AIY sing 2 n n C15 C16 AIY sing 3 n n C15 C5 AIY sing 4 n n C4 C5 AIY doub 5 n n C4 C3 AIY sing 6 n n C5 C6 AIY sing 7 n n C3 C2 AIY doub 8 n n C6 O18 AIY doub 9 n n C6 C1 AIY sing 10 n n C2 C1 AIY sing 11 n n C2 O9 AIY sing 12 n n C1 C25 AIY sing 13 n n C1 C7 AIY sing 14 n n O9 C8 AIY sing 15 n n C7 C8 AIY doub 16 n y C7 C10 AIY sing 17 n y O19 C10 AIY sing 18 n n C8 C13 AIY sing 19 n y C10 C11 AIY doub 20 n y O24 C22 AIY doub 21 n n C13 C22 AIY sing 22 n n C13 C12 AIY doub 23 n y C11 C12 AIY sing 24 n y C11 C20 AIY sing 25 n n C22 C23 AIY sing 26 n n C12 O21 AIY sing 27 n n C20 H1 AIY sing 28 n n C20 H2 AIY sing 29 n n C20 H3 AIY sing 30 n n C3 H5 AIY sing 31 n n C16 H9 AIY sing 32 n n C16 H10 AIY sing 33 n n C16 H11 AIY sing 34 n n C23 H12 AIY sing 35 n n C23 H13 AIY sing 36 n n C23 H14 AIY sing 37 n n C25 H15 AIY sing 38 n n C25 H16 AIY sing 39 n n C25 H17 AIY sing 40 n n O14 H18 AIY sing 41 n n O19 H19 AIY sing 42 n n O21 H20 AIY sing 43 n n # _atom_sites.entry_id 8JBW _atom_sites.fract_transf_matrix[1][1] 0.009062 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009062 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012369 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CO A 1 501 501 CO CO . C 3 AIY A 1 502 501 AIY LIG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 AIY . . . C 3 23.481 43.463 24.382 1 67.73 ? C10 AIY 502 A 1 HETATM 2 C C13 AIY . . . C 3 23.67 41.12 25.888 1 70.01 ? C13 AIY 502 A 1 HETATM 3 C C15 AIY . . . C 3 28.197 45.469 22.328 1 49.59 ? C15 AIY 502 A 1 HETATM 4 C C20 AIY . . . C 3 20.953 43.642 24.954 1 65.87 ? C20 AIY 502 A 1 HETATM 5 C C22 AIY . . . C 3 23.594 39.881 26.719 1 72.92 ? C22 AIY 502 A 1 HETATM 6 C C1 AIY . . . C 3 25.807 43.009 23.953 1 61.17 ? C1 AIY 502 A 1 HETATM 7 C C2 AIY . . . C 3 26.89 41.805 24.345 1 60.89 ? C2 AIY 502 A 1 HETATM 8 C C3 AIY . . . C 3 28.263 42.259 24.531 1 52.15 ? C3 AIY 502 A 1 HETATM 9 C C4 AIY . . . C 3 28.71 43.327 23.395 1 49.43 ? C4 AIY 502 A 1 HETATM 10 C C5 AIY . . . C 3 27.628 44.26 22.706 1 50.44 ? C5 AIY 502 A 1 HETATM 11 C C6 AIY . . . C 3 26.391 44.321 23.719 1 57 ? C6 AIY 502 A 1 HETATM 12 C C7 AIY . . . C 3 24.617 42.808 24.5 1 66.07 ? C7 AIY 502 A 1 HETATM 13 C C8 AIY . . . C 3 24.712 41.542 25.287 1 70.24 ? C8 AIY 502 A 1 HETATM 14 C C11 AIY . . . C 3 22.362 43.02 25.012 1 70.58 ? C11 AIY 502 A 1 HETATM 15 C C12 AIY . . . C 3 22.486 41.829 25.768 1 78.27 ? C12 AIY 502 A 1 HETATM 16 C C16 AIY . . . C 3 27.558 46.767 22.835 1 43.65 ? C16 AIY 502 A 1 HETATM 17 C C23 AIY . . . C 3 23.165 40.3 28.081 1 75.66 ? C23 AIY 502 A 1 HETATM 18 C C25 AIY . . . C 3 25.458 42.419 22.608 1 58.39 ? C25 AIY 502 A 1 HETATM 19 O O9 AIY . . . C 3 26.278 41.064 25.18 1 70.24 ? O9 AIY 502 A 1 HETATM 20 O O14 AIY . . . C 3 29.963 43.522 22.908 1 45.92 ? O14 AIY 502 A 1 HETATM 21 O O17 AIY . . . C 3 29.639 45.43 22.043 1 43.11 ? O17 AIY 502 A 1 HETATM 22 O O18 AIY . . . C 3 25.39 45.061 23.222 1 57.01 ? O18 AIY 502 A 1 HETATM 23 O O19 AIY . . . C 3 23.525 44.578 23.624 1 63.24 ? O19 AIY 502 A 1 HETATM 24 O O21 AIY . . . C 3 21.367 41.378 26.374 1 81.73 ? O21 AIY 502 A 1 HETATM 25 O O24 AIY . . . C 3 24.824 39.355 26.861 1 78.32 ? O24 AIY 502 A 1 # _model_server_stats.io_time_ms 67 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 385 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 25 #