data_8JCJ # _model_server_result.job_id DU2QdiYThCFFv8jMrDdZ0Q _model_server_result.datetime_utc '2024-11-15 01:32:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8jcj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 8JCJ # _exptl.entry_id 8JCJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 34.081 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'HYDROSULFURIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 114.91 _cell.angle_gamma 90 _cell.entry_id 8JCJ _cell.length_a 97.704 _cell.length_b 82.073 _cell.length_c 51.777 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8JCJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_557 -x,y,-z+2 -1 0 0 0 1 0 0 0 -1 -43.616335 0 93.920425 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 145 A CYS 145 1_555 B CH PBP . A PBP 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.792 ? covale ? covale2 A CB CYS 145 A CYS 145 1_555 C S H2S . A H2S 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.799 ? covale ? covale3 A SG CYS 145 A CYS 145 1_555 C S H2S . A H2S 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.97 ? covale ? covale4 B CH PBP . A PBP 401 1_555 C S H2S . A H2S 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.792 ? # _chem_comp.formula 'H2 S' _chem_comp.formula_weight 34.081 _chem_comp.id H2S _chem_comp.mon_nstd_flag . _chem_comp.name 'HYDROSULFURIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'HYDROGEN SULFIDE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S HS1 H2S sing 151 n n S HS2 H2S sing 152 n n # _atom_sites.entry_id 8JCJ _atom_sites.fract_transf_matrix[1][1] 0.010235 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004752 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012184 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021294 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PBP A 1 401 401 PBP D97 . C 3 H2S A 1 402 501 H2S S . D 4 DMS A 1 403 601 DMS DMS . E 5 GOL A 1 404 701 GOL GOL . F 6 HOH A 1 501 63 HOH HOH . F 6 HOH A 2 502 190 HOH HOH . F 6 HOH A 3 503 229 HOH HOH . F 6 HOH A 4 504 189 HOH HOH . F 6 HOH A 5 505 144 HOH HOH . F 6 HOH A 6 506 22 HOH HOH . F 6 HOH A 7 507 224 HOH HOH . F 6 HOH A 8 508 53 HOH HOH . F 6 HOH A 9 509 188 HOH HOH . F 6 HOH A 10 510 90 HOH HOH . F 6 HOH A 11 511 30 HOH HOH . F 6 HOH A 12 512 233 HOH HOH . F 6 HOH A 13 513 69 HOH HOH . F 6 HOH A 14 514 35 HOH HOH . F 6 HOH A 15 515 197 HOH HOH . F 6 HOH A 16 516 31 HOH HOH . F 6 HOH A 17 517 138 HOH HOH . F 6 HOH A 18 518 81 HOH HOH . F 6 HOH A 19 519 158 HOH HOH . F 6 HOH A 20 520 55 HOH HOH . F 6 HOH A 21 521 313 HOH HOH . F 6 HOH A 22 522 131 HOH HOH . F 6 HOH A 23 523 152 HOH HOH . F 6 HOH A 24 524 245 HOH HOH . F 6 HOH A 25 525 140 HOH HOH . F 6 HOH A 26 526 199 HOH HOH . F 6 HOH A 27 527 185 HOH HOH . F 6 HOH A 28 528 227 HOH HOH . F 6 HOH A 29 529 301 HOH HOH . F 6 HOH A 30 530 273 HOH HOH . F 6 HOH A 31 531 155 HOH HOH . F 6 HOH A 32 532 187 HOH HOH . F 6 HOH A 33 533 153 HOH HOH . F 6 HOH A 34 534 112 HOH HOH . F 6 HOH A 35 535 201 HOH HOH . F 6 HOH A 36 536 92 HOH HOH . F 6 HOH A 37 537 309 HOH HOH . F 6 HOH A 38 538 272 HOH HOH . F 6 HOH A 39 539 308 HOH HOH . F 6 HOH A 40 540 100 HOH HOH . F 6 HOH A 41 541 72 HOH HOH . F 6 HOH A 42 542 108 HOH HOH . F 6 HOH A 43 543 184 HOH HOH . F 6 HOH A 44 544 128 HOH HOH . F 6 HOH A 45 545 91 HOH HOH . F 6 HOH A 46 546 11 HOH HOH . F 6 HOH A 47 547 34 HOH HOH . F 6 HOH A 48 548 28 HOH HOH . F 6 HOH A 49 549 58 HOH HOH . F 6 HOH A 50 550 216 HOH HOH . F 6 HOH A 51 551 172 HOH HOH . F 6 HOH A 52 552 42 HOH HOH . F 6 HOH A 53 553 177 HOH HOH . F 6 HOH A 54 554 209 HOH HOH . F 6 HOH A 55 555 68 HOH HOH . F 6 HOH A 56 556 94 HOH HOH . F 6 HOH A 57 557 225 HOH HOH . F 6 HOH A 58 558 310 HOH HOH . F 6 HOH A 59 559 23 HOH HOH . F 6 HOH A 60 560 95 HOH HOH . F 6 HOH A 61 561 173 HOH HOH . F 6 HOH A 62 562 194 HOH HOH . F 6 HOH A 63 563 44 HOH HOH . F 6 HOH A 64 564 10 HOH HOH . F 6 HOH A 65 565 45 HOH HOH . F 6 HOH A 66 566 1 HOH HOH . F 6 HOH A 67 567 14 HOH HOH . F 6 HOH A 68 568 73 HOH HOH . F 6 HOH A 69 569 226 HOH HOH . F 6 HOH A 70 570 135 HOH HOH . F 6 HOH A 71 571 27 HOH HOH . F 6 HOH A 72 572 88 HOH HOH . F 6 HOH A 73 573 132 HOH HOH . F 6 HOH A 74 574 26 HOH HOH . F 6 HOH A 75 575 9 HOH HOH . F 6 HOH A 76 576 2 HOH HOH . F 6 HOH A 77 577 37 HOH HOH . F 6 HOH A 78 578 48 HOH HOH . F 6 HOH A 79 579 67 HOH HOH . F 6 HOH A 80 580 38 HOH HOH . F 6 HOH A 81 581 62 HOH HOH . F 6 HOH A 82 582 65 HOH HOH . F 6 HOH A 83 583 198 HOH HOH . F 6 HOH A 84 584 77 HOH HOH . F 6 HOH A 85 585 36 HOH HOH . F 6 HOH A 86 586 4 HOH HOH . F 6 HOH A 87 587 114 HOH HOH . F 6 HOH A 88 588 103 HOH HOH . F 6 HOH A 89 589 70 HOH HOH . F 6 HOH A 90 590 303 HOH HOH . F 6 HOH A 91 591 6 HOH HOH . F 6 HOH A 92 592 96 HOH HOH . F 6 HOH A 93 593 312 HOH HOH . F 6 HOH A 94 594 64 HOH HOH . F 6 HOH A 95 595 47 HOH HOH . F 6 HOH A 96 596 147 HOH HOH . F 6 HOH A 97 597 79 HOH HOH . F 6 HOH A 98 598 149 HOH HOH . F 6 HOH A 99 599 278 HOH HOH . F 6 HOH A 100 600 97 HOH HOH . F 6 HOH A 101 601 13 HOH HOH . F 6 HOH A 102 602 80 HOH HOH . F 6 HOH A 103 603 41 HOH HOH . F 6 HOH A 104 604 12 HOH HOH . F 6 HOH A 105 605 40 HOH HOH . F 6 HOH A 106 606 46 HOH HOH . F 6 HOH A 107 607 133 HOH HOH . F 6 HOH A 108 608 161 HOH HOH . F 6 HOH A 109 609 182 HOH HOH . F 6 HOH A 110 610 264 HOH HOH . F 6 HOH A 111 611 75 HOH HOH . F 6 HOH A 112 612 102 HOH HOH . F 6 HOH A 113 613 32 HOH HOH . F 6 HOH A 114 614 106 HOH HOH . F 6 HOH A 115 615 74 HOH HOH . F 6 HOH A 116 616 145 HOH HOH . F 6 HOH A 117 617 210 HOH HOH . F 6 HOH A 118 618 318 HOH HOH . F 6 HOH A 119 619 50 HOH HOH . F 6 HOH A 120 620 5 HOH HOH . F 6 HOH A 121 621 21 HOH HOH . F 6 HOH A 122 622 127 HOH HOH . F 6 HOH A 123 623 260 HOH HOH . F 6 HOH A 124 624 113 HOH HOH . F 6 HOH A 125 625 66 HOH HOH . F 6 HOH A 126 626 76 HOH HOH . F 6 HOH A 127 627 20 HOH HOH . F 6 HOH A 128 628 136 HOH HOH . F 6 HOH A 129 629 166 HOH HOH . F 6 HOH A 130 630 29 HOH HOH . F 6 HOH A 131 631 287 HOH HOH . F 6 HOH A 132 632 56 HOH HOH . F 6 HOH A 133 633 18 HOH HOH . F 6 HOH A 134 634 43 HOH HOH . F 6 HOH A 135 635 93 HOH HOH . F 6 HOH A 136 636 49 HOH HOH . F 6 HOH A 137 637 164 HOH HOH . F 6 HOH A 138 638 7 HOH HOH . F 6 HOH A 139 639 19 HOH HOH . F 6 HOH A 140 640 33 HOH HOH . F 6 HOH A 141 641 119 HOH HOH . F 6 HOH A 142 642 321 HOH HOH . F 6 HOH A 143 643 25 HOH HOH . F 6 HOH A 144 644 110 HOH HOH . F 6 HOH A 145 645 159 HOH HOH . F 6 HOH A 146 646 157 HOH HOH . F 6 HOH A 147 647 163 HOH HOH . F 6 HOH A 148 648 24 HOH HOH . F 6 HOH A 149 649 200 HOH HOH . F 6 HOH A 150 650 304 HOH HOH . F 6 HOH A 151 651 139 HOH HOH . F 6 HOH A 152 652 39 HOH HOH . F 6 HOH A 153 653 61 HOH HOH . F 6 HOH A 154 654 98 HOH HOH . F 6 HOH A 155 655 294 HOH HOH . F 6 HOH A 156 656 3 HOH HOH . F 6 HOH A 157 657 268 HOH HOH . F 6 HOH A 158 658 150 HOH HOH . F 6 HOH A 159 659 130 HOH HOH . F 6 HOH A 160 660 254 HOH HOH . F 6 HOH A 161 661 109 HOH HOH . F 6 HOH A 162 662 8 HOH HOH . F 6 HOH A 163 663 141 HOH HOH . F 6 HOH A 164 664 17 HOH HOH . F 6 HOH A 165 665 86 HOH HOH . F 6 HOH A 166 666 59 HOH HOH . F 6 HOH A 167 667 15 HOH HOH . F 6 HOH A 168 668 316 HOH HOH . F 6 HOH A 169 669 54 HOH HOH . F 6 HOH A 170 670 165 HOH HOH . F 6 HOH A 171 671 274 HOH HOH . F 6 HOH A 172 672 116 HOH HOH . F 6 HOH A 173 673 265 HOH HOH . F 6 HOH A 174 674 85 HOH HOH . F 6 HOH A 175 675 124 HOH HOH . F 6 HOH A 176 676 117 HOH HOH . F 6 HOH A 177 677 257 HOH HOH . F 6 HOH A 178 678 291 HOH HOH . F 6 HOH A 179 679 212 HOH HOH . F 6 HOH A 180 680 78 HOH HOH . F 6 HOH A 181 681 160 HOH HOH . F 6 HOH A 182 682 162 HOH HOH . F 6 HOH A 183 683 256 HOH HOH . F 6 HOH A 184 684 129 HOH HOH . F 6 HOH A 185 685 246 HOH HOH . F 6 HOH A 186 686 191 HOH HOH . F 6 HOH A 187 687 298 HOH HOH . F 6 HOH A 188 688 243 HOH HOH . F 6 HOH A 189 689 171 HOH HOH . F 6 HOH A 190 690 262 HOH HOH . F 6 HOH A 191 691 87 HOH HOH . F 6 HOH A 192 692 317 HOH HOH . F 6 HOH A 193 693 222 HOH HOH . F 6 HOH A 194 694 208 HOH HOH . F 6 HOH A 195 695 230 HOH HOH . F 6 HOH A 196 696 82 HOH HOH . F 6 HOH A 197 697 179 HOH HOH . F 6 HOH A 198 698 126 HOH HOH . F 6 HOH A 199 699 255 HOH HOH . F 6 HOH A 200 700 60 HOH HOH . F 6 HOH A 201 701 275 HOH HOH . F 6 HOH A 202 702 297 HOH HOH . F 6 HOH A 203 703 296 HOH HOH . F 6 HOH A 204 704 270 HOH HOH . F 6 HOH A 205 705 244 HOH HOH . F 6 HOH A 206 706 302 HOH HOH . F 6 HOH A 207 707 176 HOH HOH . F 6 HOH A 208 708 168 HOH HOH . F 6 HOH A 209 709 105 HOH HOH . F 6 HOH A 210 710 289 HOH HOH . F 6 HOH A 211 711 215 HOH HOH . F 6 HOH A 212 712 307 HOH HOH . F 6 HOH A 213 713 231 HOH HOH . F 6 HOH A 214 714 123 HOH HOH . F 6 HOH A 215 715 207 HOH HOH . F 6 HOH A 216 716 259 HOH HOH . F 6 HOH A 217 717 248 HOH HOH . F 6 HOH A 218 718 125 HOH HOH . F 6 HOH A 219 719 295 HOH HOH . F 6 HOH A 220 720 104 HOH HOH . F 6 HOH A 221 721 299 HOH HOH . F 6 HOH A 222 722 89 HOH HOH . F 6 HOH A 223 723 277 HOH HOH . F 6 HOH A 224 724 134 HOH HOH . F 6 HOH A 225 725 83 HOH HOH . F 6 HOH A 226 726 175 HOH HOH . F 6 HOH A 227 727 146 HOH HOH . F 6 HOH A 228 728 235 HOH HOH . F 6 HOH A 229 729 269 HOH HOH . F 6 HOH A 230 730 251 HOH HOH . F 6 HOH A 231 731 217 HOH HOH . F 6 HOH A 232 732 183 HOH HOH . F 6 HOH A 233 733 285 HOH HOH . F 6 HOH A 234 734 205 HOH HOH . F 6 HOH A 235 735 148 HOH HOH . F 6 HOH A 236 736 315 HOH HOH . F 6 HOH A 237 737 101 HOH HOH . F 6 HOH A 238 738 115 HOH HOH . F 6 HOH A 239 739 311 HOH HOH . F 6 HOH A 240 740 206 HOH HOH . F 6 HOH A 241 741 142 HOH HOH . F 6 HOH A 242 742 239 HOH HOH . F 6 HOH A 243 743 293 HOH HOH . F 6 HOH A 244 744 111 HOH HOH . F 6 HOH A 245 745 223 HOH HOH . F 6 HOH A 246 746 306 HOH HOH . F 6 HOH A 247 747 193 HOH HOH . F 6 HOH A 248 748 52 HOH HOH . F 6 HOH A 249 749 221 HOH HOH . F 6 HOH A 250 750 236 HOH HOH . F 6 HOH A 251 751 211 HOH HOH . F 6 HOH A 252 752 174 HOH HOH . F 6 HOH A 253 753 305 HOH HOH . F 6 HOH A 254 754 249 HOH HOH . F 6 HOH A 255 755 154 HOH HOH . F 6 HOH A 256 756 178 HOH HOH . F 6 HOH A 257 757 186 HOH HOH . F 6 HOH A 258 758 121 HOH HOH . F 6 HOH A 259 759 271 HOH HOH . F 6 HOH A 260 760 253 HOH HOH . F 6 HOH A 261 761 322 HOH HOH . F 6 HOH A 262 762 247 HOH HOH . F 6 HOH A 263 763 151 HOH HOH . F 6 HOH A 264 764 267 HOH HOH . F 6 HOH A 265 765 167 HOH HOH . F 6 HOH A 266 766 57 HOH HOH . F 6 HOH A 267 767 71 HOH HOH . F 6 HOH A 268 768 261 HOH HOH . F 6 HOH A 269 769 107 HOH HOH . F 6 HOH A 270 770 314 HOH HOH . F 6 HOH A 271 771 122 HOH HOH . F 6 HOH A 272 772 284 HOH HOH . F 6 HOH A 273 773 292 HOH HOH . F 6 HOH A 274 774 137 HOH HOH . F 6 HOH A 275 775 120 HOH HOH . F 6 HOH A 276 776 99 HOH HOH . F 6 HOH A 277 777 118 HOH HOH . F 6 HOH A 278 778 213 HOH HOH . F 6 HOH A 279 779 181 HOH HOH . F 6 HOH A 280 780 180 HOH HOH . F 6 HOH A 281 781 84 HOH HOH . F 6 HOH A 282 782 203 HOH HOH . F 6 HOH A 283 783 250 HOH HOH . F 6 HOH A 284 784 156 HOH HOH . F 6 HOH A 285 785 143 HOH HOH . F 6 HOH A 286 786 51 HOH HOH . F 6 HOH A 287 787 319 HOH HOH . F 6 HOH A 288 788 169 HOH HOH . F 6 HOH A 289 789 252 HOH HOH . F 6 HOH A 290 790 234 HOH HOH . F 6 HOH A 291 791 276 HOH HOH . F 6 HOH A 292 792 320 HOH HOH . F 6 HOH A 293 793 279 HOH HOH . F 6 HOH A 294 794 266 HOH HOH . F 6 HOH A 295 795 196 HOH HOH . F 6 HOH A 296 796 283 HOH HOH . F 6 HOH A 297 797 300 HOH HOH . F 6 HOH A 298 798 288 HOH HOH . F 6 HOH A 299 799 290 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol S _atom_site.label_atom_id S _atom_site.label_comp_id H2S _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x -13.574 _atom_site.Cartn_y 17.241 _atom_site.Cartn_z 65.996 _atom_site.occupancy 0.3 _atom_site.B_iso_or_equiv 33 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id S _atom_site.auth_comp_id H2S _atom_site.auth_seq_id 402 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 286 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #