data_8JE5 # _model_server_result.job_id unXY2Sb5BVnCqR-PAI6XcA _model_server_result.datetime_utc '2024-11-27 14:30:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8je5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1801}' # _entry.id 8JE5 # _exptl.entry_id 8JE5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 414.681 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 7-bromo-6-chloro-3-{3-[(2R,3S)-3-hydroxypiperidin-2-yl]-2-oxopropyl}quinazolin-4(3H)-one _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8JE5 _cell.length_a 81.129 _cell.length_b 114.473 _cell.length_c 120.463 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8JE5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 437 A CYS 1654 1_555 D ZN ZN . A ZN 1802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.495 ? metalc ? metalc2 A SG CYS 442 A CYS 1659 1_555 D ZN ZN . A ZN 1802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.216 ? metalc ? metalc3 A SG CYS 486 A CYS 1703 1_555 D ZN ZN . A ZN 1802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.487 ? metalc ? metalc4 A SG CYS 491 A CYS 1708 1_555 D ZN ZN . A ZN 1802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? metalc ? metalc5 B SG CYS 437 B CYS 1654 1_555 I ZN ZN . B ZN 1802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.412 ? metalc ? metalc6 B SG CYS 442 B CYS 1659 1_555 I ZN ZN . B ZN 1802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? metalc ? metalc7 B SG CYS 486 B CYS 1703 1_555 I ZN ZN . B ZN 1802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.346 ? metalc ? metalc8 B SG CYS 491 B CYS 1708 1_555 I ZN ZN . B ZN 1802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? # _chem_comp.formula 'C16 H17 Br Cl N3 O3' _chem_comp.formula_weight 414.681 _chem_comp.id HFG _chem_comp.mon_nstd_flag . _chem_comp.name 7-bromo-6-chloro-3-{3-[(2R,3S)-3-hydroxypiperidin-2-yl]-2-oxopropyl}quinazolin-4(3H)-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Halofuginone # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CL1 C6 HFG sing 142 n n C6 C5 HFG doub 143 n y C6 C7 HFG sing 144 n y BR1 C7 HFG sing 145 n n C5 C10 HFG sing 146 n y C7 C8 HFG doub 147 n y O11 C4 HFG doub 148 n n C10 C4 HFG sing 149 n n C10 C9 HFG doub 150 n y C8 C9 HFG sing 151 n y C4 N3 HFG sing 152 n n C9 N1 HFG sing 153 n n N1' C6' HFG sing 154 n n N1' C2' HFG sing 155 n n C6' C5' HFG sing 156 n n O4' C21 HFG doub 157 n n N3 C1' HFG sing 158 n n N3 C2 HFG sing 159 n n N1 C2 HFG doub 160 n n C21 C3' HFG sing 161 n n C21 C1' HFG sing 162 n n C3' C2' HFG sing 163 n n C2' C39 HFG sing 164 n n C5' C4' HFG sing 165 n n C39 C4' HFG sing 166 n n C39 O7' HFG sing 167 n n C3' H1 HFG sing 168 n n C3' H2 HFG sing 169 n n C2' H3 HFG sing 170 n n N1' H4 HFG sing 171 n n C6' H6 HFG sing 172 n n C6' H7 HFG sing 173 n n C5' H8 HFG sing 174 n n C5' H9 HFG sing 175 n n C4' H10 HFG sing 176 n n C4' H11 HFG sing 177 n n C39 H12 HFG sing 178 n n O7' H13 HFG sing 179 n n C1' H14 HFG sing 180 n n C1' H15 HFG sing 181 n n C5 H16 HFG sing 182 n n C2 H17 HFG sing 183 n n C8 H18 HFG sing 184 n n # _atom_sites.entry_id 8JE5 _atom_sites.fract_transf_matrix[1][1] 0.012326 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008736 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008301 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HFG A 1 1801 1802 HFG HFG . D 3 ZN A 1 1802 1803 ZN ZN . E 4 CL A 1 1803 1805 CL CL . F 4 CL A 1 1804 1806 CL CL . G 5 GOL A 1 1805 1807 GOL GOL . H 2 HFG B 1 1801 1802 HFG HFG . I 3 ZN B 1 1802 1803 ZN ZN . J 4 CL B 1 1803 1805 CL CL . K 5 GOL B 1 1804 1806 GOL GOL . L 5 GOL B 1 1805 1807 GOL GOL . M 6 HOH A 1 1901 1 HOH HOH . M 6 HOH A 2 1902 5 HOH HOH . M 6 HOH A 3 1903 7 HOH HOH . M 6 HOH A 4 1904 6 HOH HOH . M 6 HOH A 5 1905 2 HOH HOH . M 6 HOH A 6 1906 12 HOH HOH . M 6 HOH A 7 1907 8 HOH HOH . M 6 HOH A 8 1908 13 HOH HOH . M 6 HOH A 9 1909 16 HOH HOH . N 6 HOH B 1 1901 4 HOH HOH . N 6 HOH B 2 1902 11 HOH HOH . N 6 HOH B 3 1903 3 HOH HOH . N 6 HOH B 4 1904 15 HOH HOH . N 6 HOH B 5 1905 9 HOH HOH . N 6 HOH B 6 1906 14 HOH HOH . N 6 HOH B 7 1907 10 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O4' HFG . . . C 2 -19.623 -17.875 25.085 1 78.92 ? O4' HFG 1801 A 1 HETATM 2 C C21 HFG . . . C 2 -20.116 -18.699 25.826 1 83.56 ? C21 HFG 1801 A 1 HETATM 3 C C3' HFG . . . C 2 -21.606 -18.919 25.906 1 80.35 ? C3' HFG 1801 A 1 HETATM 4 C C2' HFG . . . C 2 -22.384 -18.463 24.665 1 78.3 ? C2' HFG 1801 A 1 HETATM 5 N N1' HFG . . . C 2 -22.292 -17.009 24.47 1 79.62 ? N1' HFG 1801 A 1 HETATM 6 C C6' HFG . . . C 2 -23.211 -16.587 23.404 1 76.81 ? C6' HFG 1801 A 1 HETATM 7 C C5' HFG . . . C 2 -22.898 -17.271 22.069 1 71.62 ? C5' HFG 1801 A 1 HETATM 8 C C4' HFG . . . C 2 -22.882 -18.79 22.236 1 64.98 ? C4' HFG 1801 A 1 HETATM 9 C C39 HFG . . . C 2 -21.954 -19.157 23.378 1 67.77 ? C39 HFG 1801 A 1 HETATM 10 O O7' HFG . . . C 2 -21.951 -20.565 23.577 1 75.62 ? O7' HFG 1801 A 1 HETATM 11 C C1' HFG . . . C 2 -19.274 -19.579 26.747 1 87.44 ? C1' HFG 1801 A 1 HETATM 12 N N3 HFG . . . C 2 -18.051 -18.922 27.161 1 82.88 ? N3 HFG 1801 A 1 HETATM 13 C C4 HFG . . . C 2 -18.139 -17.812 28.004 1 87.65 ? C4 HFG 1801 A 1 HETATM 14 O O11 HFG . . . C 2 -19.213 -17.456 28.459 1 86.78 ? O11 HFG 1801 A 1 HETATM 15 C C10 HFG . . . C 2 -16.864 -17.138 28.247 1 93.46 ? C10 HFG 1801 A 1 HETATM 16 C C5 HFG . . . C 2 -16.803 -16.025 29.088 1 94.54 ? C5 HFG 1801 A 1 HETATM 17 C C2 HFG . . . C 2 -16.845 -19.324 26.652 1 81.37 ? C2 HFG 1801 A 1 HETATM 18 N N1 HFG . . . C 2 -15.712 -18.76 26.828 1 82.84 ? N1 HFG 1801 A 1 HETATM 19 C C9 HFG . . . C 2 -15.701 -17.625 27.638 1 90.91 ? C9 HFG 1801 A 1 HETATM 20 C C8 HFG . . . C 2 -14.49 -16.978 27.844 1 100.59 ? C8 HFG 1801 A 1 HETATM 21 C C7 HFG . . . C 2 -14.441 -15.865 28.666 1 116.65 ? C7 HFG 1801 A 1 HETATM 22 BR BR1 HFG . . . C 2 -12.79 -14.956 28.844 1 132.79 ? BR1 HFG 1801 A 1 HETATM 23 C C6 HFG . . . C 2 -15.587 -15.402 29.302 1 108.97 ? C6 HFG 1801 A 1 HETATM 24 CL CL1 HFG . . . C 2 -15.505 -14.085 30.433 1 114.33 ? CL1 HFG 1801 A 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 28 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 24 #