data_8JE6
#
_model_server_result.job_id            04ceMfh5YQBZI-CSvucoLA 
_model_server_result.datetime_utc      '2025-08-04 14:21:49' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8je6 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1802}' 
#
_entry.id    8JE6 
#
_exptl.entry_id    8JE6 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              414.681 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            7-bromo-6-chloro-3-{3-[(2R,3S)-3-hydroxypiperidin-2-yl]-2-oxopropyl}quinazolin-4(3H)-one 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          105.39 
_cell.angle_gamma         90 
_cell.entry_id            8JE6 
_cell.length_a            80.978 
_cell.length_b            69.798 
_cell.length_c            106.839 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8JE6 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 H N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 437 A CYS 1654 1_555 F ZN ZN . A ZN 1804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.356 ? 
metalc ? metalc2 A SG CYS 442 A CYS 1659 1_555 F ZN ZN . A ZN 1804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.301 ? 
metalc ? metalc3 A SG CYS 486 A CYS 1703 1_555 F ZN ZN . A ZN 1804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.445 ? 
metalc ? metalc4 A SG CYS 491 A CYS 1708 1_555 F ZN ZN . A ZN 1804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.121 ? 
metalc ? metalc5 C O2G ANP . A ANP 1801 1_555 E MG MG . A MG 1803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.154 ? 
metalc ? metalc6 C O2B ANP . A ANP 1801 1_555 E MG MG . A MG 1803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.58 ? 
metalc ? metalc7 B SG CYS 437 B CYS 1654 1_555 J ZN ZN . B ZN 1804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.371 ? 
metalc ? metalc8 B SG CYS 442 B CYS 1659 1_555 J ZN ZN . B ZN 1804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.325 ? 
metalc ? metalc9 B SG CYS 486 B CYS 1703 1_555 J ZN ZN . B ZN 1804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.723 ? 
metalc ? metalc10 B SG CYS 491 B CYS 1708 1_555 J ZN ZN . B ZN 1804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.658 ? 
metalc ? metalc11 G O2G ANP . B ANP 1801 1_555 I MG MG . B MG 1803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.636 ? 
metalc ? metalc12 G O2B ANP . B ANP 1801 1_555 I MG MG . B MG 1803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.096 ? 
#
_chem_comp.formula           'C16 H17 Br Cl N3 O3' 
_chem_comp.formula_weight    414.681 
_chem_comp.id                HFG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              7-bromo-6-chloro-3-{3-[(2R,3S)-3-hydroxypiperidin-2-yl]-2-oxopropyl}quinazolin-4(3H)-one 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     Halofuginone 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CL1 C6 HFG sing 179 n n 
C6 C5 HFG doub 180 n y 
C6 C7 HFG sing 181 n y 
BR1 C7 HFG sing 182 n n 
C5 C10 HFG sing 183 n y 
C7 C8 HFG doub 184 n y 
O11 C4 HFG doub 185 n n 
C10 C4 HFG sing 186 n n 
C10 C9 HFG doub 187 n y 
C8 C9 HFG sing 188 n y 
C4 N3 HFG sing 189 n n 
C9 N1 HFG sing 190 n n 
N1' C6' HFG sing 191 n n 
N1' C2' HFG sing 192 n n 
C6' C5' HFG sing 193 n n 
O4' C21 HFG doub 194 n n 
N3 C1' HFG sing 195 n n 
N3 C2 HFG sing 196 n n 
N1 C2 HFG doub 197 n n 
C21 C3' HFG sing 198 n n 
C21 C1' HFG sing 199 n n 
C3' C2' HFG sing 200 n n 
C2' C39 HFG sing 201 n n 
C5' C4' HFG sing 202 n n 
C39 C4' HFG sing 203 n n 
C39 O7' HFG sing 204 n n 
C3' H1 HFG sing 205 n n 
C3' H2 HFG sing 206 n n 
C2' H3 HFG sing 207 n n 
N1' H4 HFG sing 208 n n 
C6' H6 HFG sing 209 n n 
C6' H7 HFG sing 210 n n 
C5' H8 HFG sing 211 n n 
C5' H9 HFG sing 212 n n 
C4' H10 HFG sing 213 n n 
C4' H11 HFG sing 214 n n 
C39 H12 HFG sing 215 n n 
O7' H13 HFG sing 216 n n 
C1' H14 HFG sing 217 n n 
C1' H15 HFG sing 218 n n 
C5 H16 HFG sing 219 n n 
C2 H17 HFG sing 220 n n 
C8 H18 HFG sing 221 n n 
#
_atom_sites.entry_id                     8JE6 
_atom_sites.fract_transf_matrix[1][1]    0.012349 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.0034 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014327 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009708 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 ANP A 1 1801 1801 ANP ANP . 
D 3 HFG A 1 1802 1802 HFG HFG . 
E 4 MG A 1 1803 1803 MG MG . 
F 5 ZN A 1 1804 1804 ZN ZN . 
G 2 ANP B 1 1801 1801 ANP ANP . 
H 3 HFG B 1 1802 1802 HFG HFG . 
I 4 MG B 1 1803 1803 MG MG . 
J 5 ZN B 1 1804 1804 ZN ZN . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O4' HFG . . . D 3 33.369 -7.701 21.472 0.91 30.31 ? O4' HFG 1802 A 1 
HETATM 2 C C21 HFG . . . D 3 34.543 -7.995 21.525 0.91 39.78 ? C21 HFG 1802 A 1 
HETATM 3 C C3' HFG . . . D 3 35.162 -8.675 22.725 0.91 34.76 ? C3' HFG 1802 A 1 
HETATM 4 C C2' HFG . . . D 3 34.177 -9.318 23.712 0.91 39.49 ? C2' HFG 1802 A 1 
HETATM 5 N N1' HFG . . . D 3 33.201 -8.365 24.247 0.91 29.85 ? N1' HFG 1802 A 1 
HETATM 6 C C6' HFG . . . D 3 32.421 -8.979 25.33 0.91 29.41 ? C6' HFG 1802 A 1 
HETATM 7 C C5' HFG . . . D 3 31.645 -10.182 24.842 0.91 29.11 ? C5' HFG 1802 A 1 
HETATM 8 C C4' HFG . . . D 3 32.587 -11.195 24.196 0.91 32.98 ? C4' HFG 1802 A 1 
HETATM 9 C C39 HFG . . . D 3 33.451 -10.531 23.137 0.91 42.74 ? C39 HFG 1802 A 1 
HETATM 10 O O7' HFG . . . D 3 34.368 -11.466 22.563 0.91 43.5 ? O7' HFG 1802 A 1 
HETATM 11 C C1' HFG . . . D 3 35.477 -7.718 20.377 0.91 41.65 ? C1' HFG 1802 A 1 
HETATM 12 N N3 HFG . . . D 3 34.964 -6.649 19.531 0.91 46 ? N3 HFG 1802 A 1 
HETATM 13 C C4 HFG . . . D 3 34.942 -5.361 20.053 0.91 53.11 ? C4 HFG 1802 A 1 
HETATM 14 O O11 HFG . . . D 3 35.469 -5.098 21.124 0.91 61.84 ? O11 HFG 1802 A 1 
HETATM 15 C C10 HFG . . . D 3 34.295 -4.379 19.183 0.91 40.43 ? C10 HFG 1802 A 1 
HETATM 16 C C5 HFG . . . D 3 34.172 -3.062 19.593 0.91 41.17 ? C5 HFG 1802 A 1 
HETATM 17 C C2 HFG . . . D 3 34.475 -6.926 18.287 0.91 50.74 ? C2 HFG 1802 A 1 
HETATM 18 N N1 HFG . . . D 3 33.917 -6.092 17.486 0.91 55.93 ? N1 HFG 1802 A 1 
HETATM 19 C C9 HFG . . . D 3 33.802 -4.78 17.941 0.91 53.02 ? C9 HFG 1802 A 1 
HETATM 20 C C8 HFG . . . D 3 33.157 -3.849 17.128 0.91 62.48 ? C8 HFG 1802 A 1 
HETATM 21 C C7 HFG . . . D 3 33.031 -2.539 17.565 0.91 64.49 ? C7 HFG 1802 A 1 
HETATM 22 BR BR1 HFG . . . D 3 32.045 -1.291 16.561 0.91 72.87 ? BR1 HFG 1802 A 1 
HETATM 23 C C6 HFG . . . D 3 33.559 -2.147 18.761 0.91 52.97 ? C6 HFG 1802 A 1 
HETATM 24 CL CL1 HFG . . . D 3 33.506 -0.478 19.206 0.91 47.09 ? CL1 HFG 1802 A 1 
#
_model_server_stats.io_time_ms              22 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    13 
_model_server_stats.query_time_ms           327 
_model_server_stats.encode_time_ms          11 
_model_server_stats.element_count           24 
#