data_8JEM
#
_model_server_result.job_id            3-08tRk--xIxmoK6hOqYRQ 
_model_server_result.datetime_utc      '2024-11-15 15:54:08' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8jem 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"SA","auth_seq_id":503}' 
#
_entry.id    8JEM 
#
_exptl.entry_id    8JEM 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              510.615 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            DODECYL-BETA-D-MALTOSIDE 
_entity.pdbx_number_of_molecules    40 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8JEM 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8JEM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 G N N 
? 4 I N N 
? 4 J N N 
? 4 K N N 
? 4 L N N 
? 4 M N N 
? 4 N N N 
? 4 R N N 
? 4 S N N 
? 4 T N N 
? 4 V N N 
? 4 W N N 
? 4 X N N 
? 4 Y N N 
? 4 Z N N 
? 4 AA N N 
? 4 BA N N 
? 4 CA N N 
? 4 DA N N 
? 4 EA N N 
? 4 HA N N 
? 4 IA N N 
? 4 KA N N 
? 4 LA N N 
? 4 MA N N 
? 4 NA N N 
? 4 OA N N 
? 4 SA N N 
? 4 TA N N 
? 4 UA N N 
? 4 VA N N 
? 4 XA N N 
? 4 YA N N 
? 4 ZA N N 
? 4 AB N N 
? 4 BB N N 
? 4 CB N N 
? 4 DB N N 
? 4 EB N N 
? 4 FB N N 
#
_chem_comp.formula           'C24 H46 O11' 
_chem_comp.formula_weight    510.615 
_chem_comp.id                LMT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              DODECYL-BETA-D-MALTOSIDE 
_chem_comp.type              d-saccharide 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1B C2B LMT sing 361 n n 
C1B O1B LMT sing 362 n n 
C1B O5B LMT sing 363 n n 
C1B H1B LMT sing 364 n n 
C2B C3B LMT sing 365 n n 
C2B O2B LMT sing 366 n n 
C2B H2B LMT sing 367 n n 
C3B C4B LMT sing 368 n n 
C3B O3B LMT sing 369 n n 
C3B H3B LMT sing 370 n n 
C4B C5B LMT sing 371 n n 
C4B O4' LMT sing 372 n n 
C4B H4B LMT sing 373 n n 
C5B C6B LMT sing 374 n n 
C5B O5B LMT sing 375 n n 
C5B H5B LMT sing 376 n n 
C6B O6B LMT sing 377 n n 
C6B "H6'2" LMT sing 378 n n 
C6B "H6'1" LMT sing 379 n n 
O1B C4' LMT sing 380 n n 
O2B H2O1 LMT sing 381 n n 
O3B H3O1 LMT sing 382 n n 
O4' H4O1 LMT sing 383 n n 
O6B H6B LMT sing 384 n n 
C1' C2' LMT sing 385 n n 
C1' O1' LMT sing 386 n n 
C1' O5' LMT sing 387 n n 
C1' H1' LMT sing 388 n n 
C2' C3' LMT sing 389 n n 
C2' O2' LMT sing 390 n n 
C2' H2' LMT sing 391 n n 
C3' C4' LMT sing 392 n n 
C3' O3' LMT sing 393 n n 
C3' H3' LMT sing 394 n n 
C4' C5' LMT sing 395 n n 
C4' H4' LMT sing 396 n n 
C5' C6' LMT sing 397 n n 
C5' O5' LMT sing 398 n n 
C5' H5' LMT sing 399 n n 
C6' O6' LMT sing 400 n n 
C6' H6D LMT sing 401 n n 
C6' H6E LMT sing 402 n n 
O1' C1 LMT sing 403 n n 
O2' H2O2 LMT sing 404 n n 
O3' H3O2 LMT sing 405 n n 
O6' H6' LMT sing 406 n n 
C1 C2 LMT sing 407 n n 
C1 H12 LMT sing 408 n n 
C1 H11 LMT sing 409 n n 
C2 C3 LMT sing 410 n n 
C2 H22 LMT sing 411 n n 
C2 H21 LMT sing 412 n n 
C3 C4 LMT sing 413 n n 
C3 H32 LMT sing 414 n n 
C3 H31 LMT sing 415 n n 
C4 C5 LMT sing 416 n n 
C4 H42 LMT sing 417 n n 
C4 H41 LMT sing 418 n n 
C5 C6 LMT sing 419 n n 
C5 H52 LMT sing 420 n n 
C5 H51 LMT sing 421 n n 
C6 C7 LMT sing 422 n n 
C6 H62 LMT sing 423 n n 
C6 H61 LMT sing 424 n n 
C7 C8 LMT sing 425 n n 
C7 H72 LMT sing 426 n n 
C7 H71 LMT sing 427 n n 
C8 C9 LMT sing 428 n n 
C8 H82 LMT sing 429 n n 
C8 H81 LMT sing 430 n n 
C9 C10 LMT sing 431 n n 
C9 H92 LMT sing 432 n n 
C9 H91 LMT sing 433 n n 
C10 C11 LMT sing 434 n n 
C10 H102 LMT sing 435 n n 
C10 H101 LMT sing 436 n n 
C11 C12 LMT sing 437 n n 
C11 H112 LMT sing 438 n n 
C11 H111 LMT sing 439 n n 
C12 H123 LMT sing 440 n n 
C12 H122 LMT sing 441 n n 
C12 H121 LMT sing 442 n n 
#
_atom_sites.entry_id                     8JEM 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 ASW A 1 501 501 ASW ASW . 
F 3 PGT A 1 502 601 PGT PGT . 
G 4 LMT A 1 503 602 LMT LMT . 
H 5 DGA A 1 504 603 DGA DGA . 
I 4 LMT A 1 505 604 LMT LMT . 
J 4 LMT A 1 506 605 LMT LMT . 
K 4 LMT A 1 507 701 LMT LMT . 
L 4 LMT A 1 508 504 LMT LMT . 
M 4 LMT A 1 509 5 LMT LMT . 
N 4 LMT A 1 510 7 LMT LMT . 
O 3 PGT A 1 511 14 PGT PGT . 
P 2 ASW B 1 501 501 ASW ASW . 
Q 3 PGT B 1 502 502 PGT PGT . 
R 4 LMT B 1 503 503 LMT LMT . 
S 4 LMT B 1 504 505 LMT LMT . 
T 4 LMT B 1 505 506 LMT LMT . 
U 3 PGT B 1 506 507 PGT PGT . 
V 4 LMT B 1 507 508 LMT LMT . 
W 4 LMT B 1 508 509 LMT LMT . 
X 4 LMT B 1 509 510 LMT LMT . 
Y 4 LMT B 1 510 601 LMT LMT . 
Z 4 LMT B 1 511 602 LMT LMT . 
AA 4 LMT B 1 512 2 LMT LMT . 
BA 4 LMT B 1 513 4 LMT LMT . 
CA 4 LMT B 1 514 11 LMT LMT . 
DA 4 LMT B 1 515 12 LMT LMT . 
EA 4 LMT B 1 516 13 LMT LMT . 
FA 2 ASW C 1 501 501 ASW ASW . 
GA 3 PGT C 1 502 502 PGT PGT . 
HA 4 LMT C 1 503 503 LMT LMT . 
IA 4 LMT C 1 504 504 LMT LMT . 
JA 5 DGA C 1 505 505 DGA DGA . 
KA 4 LMT C 1 506 506 LMT LMT . 
LA 4 LMT C 1 507 601 LMT LMT . 
MA 4 LMT C 1 508 703 LMT LMT . 
NA 4 LMT C 1 509 9 LMT LMT . 
OA 4 LMT C 1 510 10 LMT LMT . 
PA 3 PGT C 1 511 15 PGT PGT . 
QA 2 ASW D 1 501 501 ASW ASW . 
RA 3 PGT D 1 502 601 PGT PGT . 
SA 4 LMT D 1 503 701 LMT LMT . 
TA 4 LMT D 1 504 702 LMT LMT . 
UA 4 LMT D 1 505 705 LMT LMT . 
VA 4 LMT D 1 506 706 LMT LMT . 
WA 3 PGT D 1 507 707 PGT PGT . 
XA 4 LMT D 1 508 708 LMT LMT . 
YA 4 LMT D 1 509 709 LMT LMT . 
ZA 4 LMT D 1 510 801 LMT LMT . 
AB 4 LMT D 1 511 802 LMT LMT . 
BB 4 LMT D 1 512 1 LMT LMT . 
CB 4 LMT D 1 513 3 LMT LMT . 
DB 4 LMT D 1 514 6 LMT LMT . 
EB 4 LMT D 1 515 8 LMT LMT . 
FB 4 LMT D 1 516 16 LMT LMT . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1B LMT . . . SA 4 72.993 111.529 127.823 1 123.36 ? C1B LMT 503 D 1 
HETATM 2 C C2B LMT . . . SA 4 71.517 111.474 128.246 1 123.42 ? C2B LMT 503 D 1 
HETATM 3 C C3B LMT . . . SA 4 71.024 112.881 128.639 1 125.8 ? C3B LMT 503 D 1 
HETATM 4 C C4B LMT . . . SA 4 72.136 113.654 129.387 1 124.86 ? C4B LMT 503 D 1 
HETATM 5 C C5B LMT . . . SA 4 73.34 113.787 128.434 1 124.79 ? C5B LMT 503 D 1 
HETATM 6 C C6B LMT . . . SA 4 74.643 113.739 129.225 1 119.21 ? C6B LMT 503 D 1 
HETATM 7 O O1B LMT . . . SA 4 73.209 110.618 126.793 1 124.09 ? O1B LMT 503 D 1 
HETATM 8 O O2B LMT . . . SA 4 70.811 110.995 127.174 1 121.56 ? O2B LMT 503 D 1 
HETATM 9 O O3B LMT . . . SA 4 69.852 112.83 129.349 1 123.28 ? O3B LMT 503 D 1 
HETATM 10 O O4' LMT . . . SA 4 71.698 114.908 129.75 1 121.69 ? O4' LMT 503 D 1 
HETATM 11 O O5B LMT . . . SA 4 73.344 112.816 127.41 1 125.92 ? O5B LMT 503 D 1 
HETATM 12 O O6B LMT . . . SA 4 75.58 114.549 128.639 1 117.71 ? O6B LMT 503 D 1 
HETATM 13 C C1' LMT . . . SA 4 76.361 110.086 126.311 1 126.52 ? C1' LMT 503 D 1 
HETATM 14 C C2' LMT . . . SA 4 75.457 109.543 125.197 1 123.08 ? C2' LMT 503 D 1 
HETATM 15 C C3' LMT . . . SA 4 74.292 108.72 125.818 1 123.79 ? C3' LMT 503 D 1 
HETATM 16 C C4' LMT . . . SA 4 73.763 109.359 127.118 1 125 ? C4' LMT 503 D 1 
HETATM 17 C C5' LMT . . . SA 4 74.981 109.566 128.06 1 123.81 ? C5' LMT 503 D 1 
HETATM 18 C C6' LMT . . . SA 4 74.891 108.83 129.372 1 118.13 ? C6' LMT 503 D 1 
HETATM 19 O O1' LMT . . . SA 4 77.672 110 125.95 1 123.15 ? O1' LMT 503 D 1 
HETATM 20 O O2' LMT . . . SA 4 74.931 110.606 124.513 1 120.91 ? O2' LMT 503 D 1 
HETATM 21 O O3' LMT . . . SA 4 74.686 107.439 126.064 1 120.87 ? O3' LMT 503 D 1 
HETATM 22 O O5' LMT . . . SA 4 76.191 109.244 127.431 1 130.02 ? O5' LMT 503 D 1 
HETATM 23 O O6' LMT . . . SA 4 73.901 107.896 129.218 1 120.82 ? O6' LMT 503 D 1 
HETATM 24 C C1 LMT . . . SA 4 78.251 111.22 125.56 1 119 ? C1 LMT 503 D 1 
HETATM 25 C C2 LMT . . . SA 4 78.791 111.812 126.826 1 117.97 ? C2 LMT 503 D 1 
HETATM 26 C C3 LMT . . . SA 4 80.128 111.325 127.273 1 118.5 ? C3 LMT 503 D 1 
HETATM 27 C C4 LMT . . . SA 4 80.611 112.269 128.341 1 119.96 ? C4 LMT 503 D 1 
HETATM 28 C C5 LMT . . . SA 4 82.041 111.997 128.663 1 120.75 ? C5 LMT 503 D 1 
HETATM 29 C C6 LMT . . . SA 4 82.675 113.129 129.4 1 120.82 ? C6 LMT 503 D 1 
HETATM 30 C C7 LMT . . . SA 4 84.056 112.749 129.845 1 116.48 ? C7 LMT 503 D 1 
HETATM 31 C C8 LMT . . . SA 4 84.871 112.409 128.65 1 116.99 ? C8 LMT 503 D 1 
HETATM 32 C C9 LMT . . . SA 4 85.832 113.468 128.234 1 116.57 ? C9 LMT 503 D 1 
HETATM 33 C C10 LMT . . . SA 4 85.344 114.018 126.926 1 117.67 ? C10 LMT 503 D 1 
HETATM 34 C C11 LMT . . . SA 4 85.102 112.943 125.919 1 117.19 ? C11 LMT 503 D 1 
HETATM 35 C C12 LMT . . . SA 4 84.532 113.496 124.661 1 115 ? C12 LMT 503 D 1 
#
_model_server_stats.io_time_ms              23 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    30 
_model_server_stats.query_time_ms           294 
_model_server_stats.encode_time_ms          11 
_model_server_stats.element_count           35 
#