data_8JES # _model_server_result.job_id Heh8LEwnFljD2DZtRnCHsg _model_server_result.datetime_utc '2025-03-06 03:29:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8jes # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":604}' # _entry.id 8JES # _exptl.entry_id 8JES _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 510.615 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DODECYL-BETA-D-MALTOSIDE _entity.pdbx_number_of_molecules 35 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8JES _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8JES _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N ? 3 O N N ? 3 P N N ? 3 Q N N ? 3 R N N ? 3 S N N ? 3 T N N ? 3 U N N ? 3 V N N ? 3 W N N ? 3 X N N ? 3 Y N N ? 3 Z N N ? 3 BA N N ? 3 CA N N ? 3 DA N N ? 3 EA N N ? 3 FA N N ? 3 GA N N ? 3 KA N N ? 3 LA N N ? 3 MA N N ? 3 NA N N ? 3 OA N N ? 3 PA N N ? 3 QA N N ? 3 RA N N ? 3 SA N N ? 3 TA N N ? 3 UA N N # _chem_comp.formula 'C24 H46 O11' _chem_comp.formula_weight 510.615 _chem_comp.id LMT _chem_comp.mon_nstd_flag . _chem_comp.name DODECYL-BETA-D-MALTOSIDE _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1B C2B LMT sing 311 n n C1B O1B LMT sing 312 n n C1B O5B LMT sing 313 n n C1B H1B LMT sing 314 n n C2B C3B LMT sing 315 n n C2B O2B LMT sing 316 n n C2B H2B LMT sing 317 n n C3B C4B LMT sing 318 n n C3B O3B LMT sing 319 n n C3B H3B LMT sing 320 n n C4B C5B LMT sing 321 n n C4B O4' LMT sing 322 n n C4B H4B LMT sing 323 n n C5B C6B LMT sing 324 n n C5B O5B LMT sing 325 n n C5B H5B LMT sing 326 n n C6B O6B LMT sing 327 n n C6B "H6'2" LMT sing 328 n n C6B "H6'1" LMT sing 329 n n O1B C4' LMT sing 330 n n O2B H2O1 LMT sing 331 n n O3B H3O1 LMT sing 332 n n O4' H4O1 LMT sing 333 n n O6B H6B LMT sing 334 n n C1' C2' LMT sing 335 n n C1' O1' LMT sing 336 n n C1' O5' LMT sing 337 n n C1' H1' LMT sing 338 n n C2' C3' LMT sing 339 n n C2' O2' LMT sing 340 n n C2' H2' LMT sing 341 n n C3' C4' LMT sing 342 n n C3' O3' LMT sing 343 n n C3' H3' LMT sing 344 n n C4' C5' LMT sing 345 n n C4' H4' LMT sing 346 n n C5' C6' LMT sing 347 n n C5' O5' LMT sing 348 n n C5' H5' LMT sing 349 n n C6' O6' LMT sing 350 n n C6' H6D LMT sing 351 n n C6' H6E LMT sing 352 n n O1' C1 LMT sing 353 n n O2' H2O2 LMT sing 354 n n O3' H3O2 LMT sing 355 n n O6' H6' LMT sing 356 n n C1 C2 LMT sing 357 n n C1 H12 LMT sing 358 n n C1 H11 LMT sing 359 n n C2 C3 LMT sing 360 n n C2 H22 LMT sing 361 n n C2 H21 LMT sing 362 n n C3 C4 LMT sing 363 n n C3 H32 LMT sing 364 n n C3 H31 LMT sing 365 n n C4 C5 LMT sing 366 n n C4 H42 LMT sing 367 n n C4 H41 LMT sing 368 n n C5 C6 LMT sing 369 n n C5 H52 LMT sing 370 n n C5 H51 LMT sing 371 n n C6 C7 LMT sing 372 n n C6 H62 LMT sing 373 n n C6 H61 LMT sing 374 n n C7 C8 LMT sing 375 n n C7 H72 LMT sing 376 n n C7 H71 LMT sing 377 n n C8 C9 LMT sing 378 n n C8 H82 LMT sing 379 n n C8 H81 LMT sing 380 n n C9 C10 LMT sing 381 n n C9 H92 LMT sing 382 n n C9 H91 LMT sing 383 n n C10 C11 LMT sing 384 n n C10 H102 LMT sing 385 n n C10 H101 LMT sing 386 n n C11 C12 LMT sing 387 n n C11 H112 LMT sing 388 n n C11 H111 LMT sing 389 n n C12 H123 LMT sing 390 n n C12 H122 LMT sing 391 n n C12 H121 LMT sing 392 n n # _atom_sites.entry_id 8JES _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 PGT A 1 601 601 PGT PGT . F 3 LMT A 1 602 602 LMT LMT . G 4 DGA A 1 603 603 DGA DGA . H 3 LMT A 1 604 604 LMT LMT . I 3 LMT A 1 605 605 LMT LMT . J 3 LMT A 1 606 701 LMT LMT . K 3 LMT A 1 607 5 LMT LMT . L 3 LMT A 1 608 7 LMT LMT . M 2 PGT A 1 609 14 PGT PGT . N 2 PGT B 1 501 502 PGT PGT . O 3 LMT B 1 502 503 LMT LMT . P 3 LMT B 1 503 505 LMT LMT . Q 3 LMT B 1 504 506 LMT LMT . R 3 LMT B 1 505 509 LMT LMT . S 3 LMT B 1 506 510 LMT LMT . T 3 LMT B 1 507 601 LMT LMT . U 3 LMT B 1 508 602 LMT LMT . V 3 LMT B 1 509 2 LMT LMT . W 3 LMT B 1 510 4 LMT LMT . X 3 LMT B 1 511 11 LMT LMT . Y 3 LMT B 1 512 12 LMT LMT . Z 3 LMT B 1 513 13 LMT LMT . AA 2 PGT C 1 501 502 PGT PGT . BA 3 LMT C 1 502 503 LMT LMT . CA 3 LMT C 1 503 504 LMT LMT . DA 3 LMT C 1 504 506 LMT LMT . EA 3 LMT C 1 505 601 LMT LMT . FA 3 LMT C 1 506 9 LMT LMT . GA 3 LMT C 1 507 10 LMT LMT . HA 2 PGT C 1 508 15 PGT PGT . IA 4 DGA D 1 501 505 DGA DGA . JA 2 PGT D 1 502 601 PGT PGT . KA 3 LMT D 1 503 701 LMT LMT . LA 3 LMT D 1 504 702 LMT LMT . MA 3 LMT D 1 505 705 LMT LMT . NA 3 LMT D 1 506 709 LMT LMT . OA 3 LMT D 1 507 801 LMT LMT . PA 3 LMT D 1 508 802 LMT LMT . QA 3 LMT D 1 509 1 LMT LMT . RA 3 LMT D 1 510 3 LMT LMT . SA 3 LMT D 1 511 6 LMT LMT . TA 3 LMT D 1 512 8 LMT LMT . UA 3 LMT D 1 513 16 LMT LMT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1B LMT . . . H 3 128.51 115.751 117.229 1 212.02 ? C1B LMT 604 A 1 HETATM 2 C C2B LMT . . . H 3 127.407 114.985 116.473 1 212.21 ? C2B LMT 604 A 1 HETATM 3 C C3B LMT . . . H 3 127.398 113.496 116.873 1 211.96 ? C3B LMT 604 A 1 HETATM 4 C C4B LMT . . . H 3 128.818 112.891 116.771 1 212.13 ? C4B LMT 604 A 1 HETATM 5 C C5B LMT . . . H 3 129.763 113.793 117.579 1 211.82 ? C5B LMT 604 A 1 HETATM 6 C C6B LMT . . . H 3 131.177 113.227 117.537 1 211.6 ? C6B LMT 604 A 1 HETATM 7 O O1B LMT . . . H 3 128.15 115.865 118.565 1 210.36 ? O1B LMT 604 A 1 HETATM 8 O O2B LMT . . . H 3 126.215 115.58 116.794 1 211.16 ? O2B LMT 604 A 1 HETATM 9 O O3B LMT . . . H 3 126.474 112.786 116.151 1 210.88 ? O3B LMT 604 A 1 HETATM 10 O O4' LMT . . . H 3 128.844 111.619 117.294 1 211.47 ? O4' LMT 604 A 1 HETATM 11 O O5B LMT . . . H 3 129.749 115.118 117.111 1 212.55 ? O5B LMT 604 A 1 HETATM 12 O O6B LMT . . . H 3 131.839 113.694 116.43 1 209.78 ? O6B LMT 604 A 1 HETATM 13 C C1' LMT . . . H 3 126.692 117.753 121.292 1 211.6 ? C1' LMT 604 A 1 HETATM 14 C C2' LMT . . . H 3 126.44 118.077 119.808 1 210.89 ? C2' LMT 604 A 1 HETATM 15 C C3' LMT . . . H 3 127.79 118.183 119.044 1 210.18 ? C3' LMT 604 A 1 HETATM 16 C C4' LMT . . . H 3 128.686 116.951 119.283 1 209.82 ? C4' LMT 604 A 1 HETATM 17 C C5' LMT . . . H 3 128.599 116.616 120.788 1 209.92 ? C5' LMT 604 A 1 HETATM 18 C C6' LMT . . . H 3 129.897 116.165 121.4 1 209.43 ? C6' LMT 604 A 1 HETATM 19 O O1' LMT . . . H 3 126.206 118.752 122.085 1 211.07 ? O1' LMT 604 A 1 HETATM 20 O O2' LMT . . . H 3 125.707 117.055 119.263 1 209.96 ? O2' LMT 604 A 1 HETATM 21 O O3' LMT . . . H 3 128.458 119.313 119.41 1 211.05 ? O3' LMT 604 A 1 HETATM 22 O O5' LMT . . . H 3 128.089 117.702 121.506 1 211.14 ? O5' LMT 604 A 1 HETATM 23 O O6' LMT . . . H 3 130.321 115.108 120.639 1 209.07 ? O6' LMT 604 A 1 HETATM 24 C C1 LMT . . . H 3 126.84 118.871 123.337 1 210.42 ? C1 LMT 604 A 1 HETATM 25 C C2 LMT . . . H 3 125.748 119.258 124.287 1 208.91 ? C2 LMT 604 A 1 HETATM 26 C C3 LMT . . . H 3 126.175 119.641 125.666 1 208.74 ? C3 LMT 604 A 1 HETATM 27 C C4 LMT . . . H 3 124.966 119.54 126.557 1 208.54 ? C4 LMT 604 A 1 HETATM 28 C C5 LMT . . . H 3 125.343 118.943 127.87 1 209.55 ? C5 LMT 604 A 1 HETATM 29 C C6 LMT . . . H 3 125.68 119.981 128.886 1 209.64 ? C6 LMT 604 A 1 HETATM 30 C C7 LMT . . . H 3 124.442 120.731 129.275 1 210.59 ? C7 LMT 604 A 1 HETATM 31 C C8 LMT . . . H 3 124.68 121.415 130.576 1 211.18 ? C8 LMT 604 A 1 HETATM 32 C C9 LMT . . . H 3 124.83 120.488 131.738 1 209.91 ? C9 LMT 604 A 1 HETATM 33 C C10 LMT . . . H 3 123.861 120.937 132.795 1 211.07 ? C10 LMT 604 A 1 HETATM 34 C C11 LMT . . . H 3 122.473 120.47 132.498 1 211.12 ? C11 LMT 604 A 1 HETATM 35 C C12 LMT . . . H 3 121.496 120.954 133.516 1 209.31 ? C12 LMT 604 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 63 _model_server_stats.query_time_ms 349 _model_server_stats.encode_time_ms 42 _model_server_stats.element_count 35 #