data_8JF2
#
_model_server_result.job_id            wpClM5mlRXytaPGj0MQqKQ 
_model_server_result.datetime_utc      '2025-03-06 03:37:56' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8jf2 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"JA","auth_seq_id":603}' 
#
_entry.id    8JF2 
#
_exptl.entry_id    8JF2 
_exptl.method      'ELECTRON MICROSCOPY' 
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_entity.details                     ? 
_entity.formula_weight              510.615 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            DODECYL-BETA-D-MALTOSIDE 
_entity.pdbx_number_of_molecules    25 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8JF2 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8JF2 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    octameric 
_pdbx_struct_assembly.oligomeric_count      8 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 J N N 
? 4 K N N 
? 4 L N N 
? 4 M N N 
? 4 P N N 
? 4 Q N N 
? 4 R N N 
? 4 S N N 
? 4 T N N 
? 4 U N N 
? 4 V N N 
? 4 W N N 
? 4 AA N N 
? 4 BA N N 
? 4 CA N N 
? 4 DA N N 
? 4 EA N N 
? 4 FA N N 
? 4 IA N N 
? 4 JA N N 
? 4 KA N N 
? 4 LA N N 
? 4 MA N N 
? 4 NA N N 
? 4 OA N N 
#
_chem_comp.formula           'C24 H46 O11' 
_chem_comp.formula_weight    510.615 
_chem_comp.id                LMT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              DODECYL-BETA-D-MALTOSIDE 
_chem_comp.type              d-saccharide 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1B C2B LMT sing 311 n n 
C1B O1B LMT sing 312 n n 
C1B O5B LMT sing 313 n n 
C1B H1B LMT sing 314 n n 
C2B C3B LMT sing 315 n n 
C2B O2B LMT sing 316 n n 
C2B H2B LMT sing 317 n n 
C3B C4B LMT sing 318 n n 
C3B O3B LMT sing 319 n n 
C3B H3B LMT sing 320 n n 
C4B C5B LMT sing 321 n n 
C4B O4' LMT sing 322 n n 
C4B H4B LMT sing 323 n n 
C5B C6B LMT sing 324 n n 
C5B O5B LMT sing 325 n n 
C5B H5B LMT sing 326 n n 
C6B O6B LMT sing 327 n n 
C6B "H6'2" LMT sing 328 n n 
C6B "H6'1" LMT sing 329 n n 
O1B C4' LMT sing 330 n n 
O2B H2O1 LMT sing 331 n n 
O3B H3O1 LMT sing 332 n n 
O4' H4O1 LMT sing 333 n n 
O6B H6B LMT sing 334 n n 
C1' C2' LMT sing 335 n n 
C1' O1' LMT sing 336 n n 
C1' O5' LMT sing 337 n n 
C1' H1' LMT sing 338 n n 
C2' C3' LMT sing 339 n n 
C2' O2' LMT sing 340 n n 
C2' H2' LMT sing 341 n n 
C3' C4' LMT sing 342 n n 
C3' O3' LMT sing 343 n n 
C3' H3' LMT sing 344 n n 
C4' C5' LMT sing 345 n n 
C4' H4' LMT sing 346 n n 
C5' C6' LMT sing 347 n n 
C5' O5' LMT sing 348 n n 
C5' H5' LMT sing 349 n n 
C6' O6' LMT sing 350 n n 
C6' H6D LMT sing 351 n n 
C6' H6E LMT sing 352 n n 
O1' C1 LMT sing 353 n n 
O2' H2O2 LMT sing 354 n n 
O3' H3O2 LMT sing 355 n n 
O6' H6' LMT sing 356 n n 
C1 C2 LMT sing 357 n n 
C1 H12 LMT sing 358 n n 
C1 H11 LMT sing 359 n n 
C2 C3 LMT sing 360 n n 
C2 H22 LMT sing 361 n n 
C2 H21 LMT sing 362 n n 
C3 C4 LMT sing 363 n n 
C3 H32 LMT sing 364 n n 
C3 H31 LMT sing 365 n n 
C4 C5 LMT sing 366 n n 
C4 H42 LMT sing 367 n n 
C4 H41 LMT sing 368 n n 
C5 C6 LMT sing 369 n n 
C5 H52 LMT sing 370 n n 
C5 H51 LMT sing 371 n n 
C6 C7 LMT sing 372 n n 
C6 H62 LMT sing 373 n n 
C6 H61 LMT sing 374 n n 
C7 C8 LMT sing 375 n n 
C7 H72 LMT sing 376 n n 
C7 H71 LMT sing 377 n n 
C8 C9 LMT sing 378 n n 
C8 H82 LMT sing 379 n n 
C8 H81 LMT sing 380 n n 
C9 C10 LMT sing 381 n n 
C9 H92 LMT sing 382 n n 
C9 H91 LMT sing 383 n n 
C10 C11 LMT sing 384 n n 
C10 H102 LMT sing 385 n n 
C10 H101 LMT sing 386 n n 
C11 C12 LMT sing 387 n n 
C11 H112 LMT sing 388 n n 
C11 H111 LMT sing 389 n n 
C12 H123 LMT sing 390 n n 
C12 H122 LMT sing 391 n n 
C12 H121 LMT sing 392 n n 
#
_atom_sites.entry_id                     8JF2 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 3 PGT A 1 601 601 PGT PGT . 
J 4 LMT A 1 602 5 LMT LMT . 
K 4 LMT A 1 603 17 LMT LMT . 
L 4 LMT A 1 604 18 LMT LMT . 
M 4 LMT A 1 605 19 LMT LMT . 
N 5 DGA B 1 501 603 DGA DGA . 
O 3 PGT B 1 502 502 PGT PGT . 
P 4 LMT B 1 503 2 LMT LMT . 
Q 4 LMT B 1 504 4 LMT LMT . 
R 4 LMT B 1 505 11 LMT LMT . 
S 4 LMT B 1 506 12 LMT LMT . 
T 4 LMT B 1 507 13 LMT LMT . 
U 4 LMT B 1 508 14 LMT LMT . 
V 4 LMT B 1 509 21 LMT LMT . 
W 4 LMT B 1 510 23 LMT LMT . 
X 3 PGT B 1 511 114 PGT PGT . 
Y 3 PGT C 1 501 502 PGT PGT . 
Z 5 DGA C 1 502 505 DGA DGA . 
AA 4 LMT C 1 503 9 LMT LMT . 
BA 4 LMT C 1 504 10 LMT LMT . 
CA 4 LMT C 1 505 16 LMT LMT . 
DA 4 LMT C 1 506 20 LMT LMT . 
EA 4 LMT C 1 507 22 LMT LMT . 
FA 4 LMT C 1 508 25 LMT LMT . 
GA 3 PGT C 1 509 115 PGT PGT . 
HA 3 PGT D 1 601 601 PGT PGT . 
IA 4 LMT D 1 602 1 LMT LMT . 
JA 4 LMT D 1 603 3 LMT LMT . 
KA 4 LMT D 1 604 6 LMT LMT . 
LA 4 LMT D 1 605 7 LMT LMT . 
MA 4 LMT D 1 606 8 LMT LMT . 
NA 4 LMT D 1 607 15 LMT LMT . 
OA 4 LMT D 1 608 24 LMT LMT . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1B LMT . . . JA 4 125.265 127.624 101.146 1 141.58 ? C1B LMT 603 D 1 
HETATM 2 C C2B LMT . . . JA 4 126.508 126.988 100.504 1 141.58 ? C2B LMT 603 D 1 
HETATM 3 C C3B LMT . . . JA 4 127.046 127.889 99.378 1 141.58 ? C3B LMT 603 D 1 
HETATM 4 C C4B LMT . . . JA 4 127.229 129.343 99.881 1 141.58 ? C4B LMT 603 D 1 
HETATM 5 C C5B LMT . . . JA 4 125.905 129.798 100.524 1 141.58 ? C5B LMT 603 D 1 
HETATM 6 C C6B LMT . . . JA 4 125.412 131.077 99.855 1 141.58 ? C6B LMT 603 D 1 
HETATM 7 O O1B LMT . . . JA 4 125.546 127.891 102.476 1 141.58 ? O1B LMT 603 D 1 
HETATM 8 O O2B LMT . . . JA 4 127.443 126.847 101.495 1 141.58 ? O2B LMT 603 D 1 
HETATM 9 O O3B LMT . . . JA 4 126.26 127.817 98.259 1 141.58 ? O3B LMT 603 D 1 
HETATM 10 O O4' LMT . . . JA 4 128.238 129.414 100.815 1 141.58 ? O4' LMT 603 D 1 
HETATM 11 O O5B LMT . . . JA 4 124.913 128.799 100.483 1 141.58 ? O5B LMT 603 D 1 
HETATM 12 O O6B LMT . . . JA 4 125.213 132.058 100.793 1 141.58 ? O6B LMT 603 D 1 
HETATM 13 C C1' LMT . . . JA 4 125.98 129.328 105.302 1 141.58 ? C1' LMT 603 D 1 
HETATM 14 C C2' LMT . . . JA 4 126.2 127.81 105.211 1 141.58 ? C2' LMT 603 D 1 
HETATM 15 C C3' LMT . . . JA 4 124.921 127.151 104.641 1 141.58 ? C3' LMT 603 D 1 
HETATM 16 C C4' LMT . . . JA 4 124.47 127.894 103.382 1 141.58 ? C4' LMT 603 D 1 
HETATM 17 C C5' LMT . . . JA 4 124.221 129.356 103.823 1 141.58 ? C5' LMT 603 D 1 
HETATM 18 C C6' LMT . . . JA 4 122.804 129.814 103.634 1 141.58 ? C6' LMT 603 D 1 
HETATM 19 O O1' LMT . . . JA 4 126.334 129.791 106.533 1 141.58 ? O1' LMT 603 D 1 
HETATM 20 O O2' LMT . . . JA 4 127.234 127.578 104.342 1 141.58 ? O2' LMT 603 D 1 
HETATM 21 O O3' LMT . . . JA 4 123.92 127.185 105.561 1 141.58 ? O3' LMT 603 D 1 
HETATM 22 O O5' LMT . . . JA 4 124.593 129.567 105.159 1 141.58 ? O5' LMT 603 D 1 
HETATM 23 O O6' LMT . . . JA 4 122.071 129.126 104.563 1 141.58 ? O6' LMT 603 D 1 
HETATM 24 C C1 LMT . . . JA 4 127.694 129.617 106.85 1 141.58 ? C1 LMT 603 D 1 
HETATM 25 C C2 LMT . . . JA 4 127.784 129.928 108.31 1 141.58 ? C2 LMT 603 D 1 
HETATM 26 C C3 LMT . . . JA 4 127.252 131.256 108.731 1 141.58 ? C3 LMT 603 D 1 
HETATM 27 C C4 LMT . . . JA 4 126.191 131 109.763 1 141.58 ? C4 LMT 603 D 1 
HETATM 28 C C5 LMT . . . JA 4 126.781 130.331 110.956 1 141.58 ? C5 LMT 603 D 1 
HETATM 29 C C6 LMT . . . JA 4 127.443 131.304 111.868 1 141.58 ? C6 LMT 603 D 1 
HETATM 30 C C7 LMT . . . JA 4 127.055 131.013 113.285 1 141.58 ? C7 LMT 603 D 1 
HETATM 31 C C8 LMT . . . JA 4 125.673 131.509 113.514 1 141.58 ? C8 LMT 603 D 1 
HETATM 32 C C9 LMT . . . JA 4 125.13 131.219 114.874 1 141.58 ? C9 LMT 603 D 1 
HETATM 33 C C10 LMT . . . JA 4 125.951 132 115.858 1 141.58 ? C10 LMT 603 D 1 
HETATM 34 C C11 LMT . . . JA 4 125.497 131.757 117.259 1 141.58 ? C11 LMT 603 D 1 
HETATM 35 C C12 LMT . . . JA 4 125.557 130.311 117.61 1 141.58 ? C12 LMT 603 D 1 
#
_model_server_stats.io_time_ms              22 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    36 
_model_server_stats.query_time_ms           311 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           35 
#