data_8JFL # _model_server_result.job_id Pate5Vv3Tt_S8hok9HYlsg _model_server_result.datetime_utc '2024-10-18 06:24:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8jfl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":1301}' # _entry.id 8JFL # _exptl.entry_id 8JFL _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 206.367 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description FARNESYL _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 M N N ? 4 N N N ? 4 O N N ? 4 P N N ? 4 Q N N ? 4 S N N ? 4 U N N ? 4 W N N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id Q _struct_conn.ptnr1_label_atom_id C15 _struct_conn.ptnr1_label_comp_id FAR _struct_conn.ptnr1_label_seq_id . _struct_conn.ptnr1_auth_asym_id B _struct_conn.ptnr1_auth_comp_id FAR _struct_conn.ptnr1_auth_seq_id 1101 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id W _struct_conn.ptnr2_label_atom_id C15 _struct_conn.ptnr2_label_comp_id FAR _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id N _struct_conn.ptnr2_auth_comp_id FAR _struct_conn.ptnr2_auth_seq_id 1101 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.557 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C15 H26' _chem_comp.formula_weight 206.367 _chem_comp.id FAR _chem_comp.mon_nstd_flag . _chem_comp.name FARNESYL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 FAR sing 127 n n C1 H11 FAR sing 128 n n C1 H12A FAR sing 129 n n C1 H13 FAR sing 130 n n C2 C3 FAR doub 131 e n C2 H2 FAR sing 132 n n C3 C5 FAR sing 133 n n C3 C4 FAR sing 134 n n C5 C6 FAR sing 135 n n C5 H51 FAR sing 136 n n C5 H52 FAR sing 137 n n C6 C7 FAR sing 138 n n C6 H61 FAR sing 139 n n C6 H62 FAR sing 140 n n C7 C8 FAR doub 141 e n C7 H7 FAR sing 142 n n C8 C9 FAR sing 143 n n C8 C10 FAR sing 144 n n C9 C11 FAR sing 145 n n C9 H91 FAR sing 146 n n C9 H92 FAR sing 147 n n C11 C12 FAR sing 148 n n C11 H111 FAR sing 149 n n C11 H112 FAR sing 150 n n C12 C13 FAR doub 151 n n C12 H12 FAR sing 152 n n C13 C14 FAR sing 153 n n C13 C15 FAR sing 154 n n C14 H141 FAR sing 155 n n C14 H142 FAR sing 156 n n C14 H143 FAR sing 157 n n C15 H151 FAR sing 158 n n C15 H152 FAR sing 159 n n C15 H153 FAR sing 160 n n C4 H41 FAR sing 161 n n C4 H42 FAR sing 162 n n C4 H43 FAR sing 163 n n C10 H101 FAR sing 164 n n C10 H102 FAR sing 165 n n C10 H103 FAR sing 166 n n # _atom_sites.entry_id 8JFL _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 4 FAR A 1 1301 1301 FAR FAR . N 4 FAR E 1 1301 1301 FAR FAR . O 4 FAR M 1 1301 1301 FAR FAR . P 4 FAR I 1 1301 1301 FAR FAR . Q 4 FAR B 1 1101 1101 FAR FAR . R 5 ADP B 1 1102 1306 ADP ADP . S 4 FAR F 1 1101 1101 FAR FAR . T 5 ADP F 1 1102 1306 ADP ADP . U 4 FAR F 1 1103 1101 FAR FAR . V 5 ADP J 1 1101 1306 ADP ADP . W 4 FAR N 1 1101 1101 FAR FAR . X 5 ADP N 1 1102 1306 ADP ADP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 FAR . . . O 4 226.54 311.04 132.569 1 89.45 ? C1 FAR 1301 M 1 HETATM 2 C C2 FAR . . . O 4 226.563 312.246 133.473 1 89.31 ? C2 FAR 1301 M 1 HETATM 3 C C3 FAR . . . O 4 225.684 312.359 134.476 1 89.27 ? C3 FAR 1301 M 1 HETATM 4 C C5 FAR . . . O 4 225.722 313.578 135.367 1 90.14 ? C5 FAR 1301 M 1 HETATM 5 C C6 FAR . . . O 4 225.793 313.168 136.836 1 89.79 ? C6 FAR 1301 M 1 HETATM 6 C C7 FAR . . . O 4 227.045 312.354 137.062 1 89.26 ? C7 FAR 1301 M 1 HETATM 7 C C8 FAR . . . O 4 228.16 312.895 137.561 1 89.95 ? C8 FAR 1301 M 1 HETATM 8 C C9 FAR . . . O 4 229.382 312.052 137.755 1 91.57 ? C9 FAR 1301 M 1 HETATM 9 C C11 FAR . . . O 4 229.022 310.75 138.461 1 91.33 ? C11 FAR 1301 M 1 HETATM 10 C C12 FAR . . . O 4 230.288 309.95 138.652 1 89.12 ? C12 FAR 1301 M 1 HETATM 11 C C13 FAR . . . O 4 230.83 309.776 139.866 1 89.32 ? C13 FAR 1301 M 1 HETATM 12 C C14 FAR . . . O 4 232.089 308.977 140.007 1 88.86 ? C14 FAR 1301 M 1 HETATM 13 C C15 FAR . . . O 4 230.186 310.373 141.082 1 87.66 ? C15 FAR 1301 M 1 HETATM 14 C C4 FAR . . . O 4 224.652 311.288 134.686 1 87.3 ? C4 FAR 1301 M 1 HETATM 15 C C10 FAR . . . O 4 228.247 314.338 137.925 1 89.5 ? C10 FAR 1301 M 1 # _model_server_stats.io_time_ms 29 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 409 _model_server_stats.query_time_ms 256 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 15 #