data_8JH9
#
_model_server_result.job_id            QlM2caC59pJD4_iFwo_Vow 
_model_server_result.datetime_utc      '2024-10-20 19:47:18' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8jh9 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":302}' 
#
_entry.id    8JH9 
#
_exptl.entry_id    8JH9 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          125.563 
_cell.angle_gamma         90 
_cell.entry_id            8JH9 
_cell.length_a            101.274 
_cell.length_b            38.572 
_cell.length_c            77.878 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8JH9 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    'C 2y' 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_pdbx_entity_branch.entity_id    2 
_pdbx_entity_branch.type         oligosaccharide 
#
_pdbx_entity_branch_link.link_id                     1 
_pdbx_entity_branch_link.details                     ? 
_pdbx_entity_branch_link.entity_id                   2 
_pdbx_entity_branch_link.entity_branch_list_num_1    2 
_pdbx_entity_branch_link.entity_branch_list_num_2    1 
_pdbx_entity_branch_link.comp_id_1                   NAG 
_pdbx_entity_branch_link.comp_id_2                   NAG 
_pdbx_entity_branch_link.atom_id_1                   C1 
_pdbx_entity_branch_link.leaving_atom_id_1           O1 
_pdbx_entity_branch_link.atom_stereo_config_1        . 
_pdbx_entity_branch_link.atom_id_2                   O4 
_pdbx_entity_branch_link.leaving_atom_id_2           HO4 
_pdbx_entity_branch_link.atom_stereo_config_2        . 
_pdbx_entity_branch_link.value_order                 sing 
#
loop_
_pdbx_branch_scheme.entity_id
_pdbx_branch_scheme.hetero
_pdbx_branch_scheme.asym_id
_pdbx_branch_scheme.mon_id
_pdbx_branch_scheme.num
_pdbx_branch_scheme.pdb_asym_id
_pdbx_branch_scheme.pdb_seq_num
_pdbx_branch_scheme.pdb_mon_id
_pdbx_branch_scheme.auth_asym_id
_pdbx_branch_scheme.auth_seq_num
_pdbx_branch_scheme.auth_mon_id
2 n B NAG 1 B 1 NAG A 243 NAG 
2 n B NAG 2 B 2 NAG A 244 NAG 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 12 A CYS 6 1_555 A SG CYS 113 A CYS 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? 
disulf ? disulf2 A SG CYS 136 A CYS 130 1_555 A SG CYS 156 A CYS 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf3 A SG CYS 194 A CYS 188 1_555 A SG CYS 215 A CYS 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.008 ? 
covale ? covale1 A ND2 ASN 115 A ASN 109 1_555 B C1 NAG . B NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.445 ? 
covale ? covale2 B O4 NAG . B NAG 1 1_555 B C1 NAG . B NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.453 ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     8JH9 
_atom_sites.fract_transf_matrix[1][1]    0.009874 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.00706 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.025926 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015785 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 FER A 1 301 245 FER FER . 
D 4 MG A 1 302 246 MG MG . 
E 5 HOH A 1 401 86 HOH HOH . 
E 5 HOH A 2 402 84 HOH HOH . 
E 5 HOH A 3 403 103 HOH HOH . 
E 5 HOH A 4 404 54 HOH HOH . 
E 5 HOH A 5 405 48 HOH HOH . 
E 5 HOH A 6 406 28 HOH HOH . 
E 5 HOH A 7 407 61 HOH HOH . 
E 5 HOH A 8 408 60 HOH HOH . 
E 5 HOH A 9 409 119 HOH HOH . 
E 5 HOH A 10 410 104 HOH HOH . 
E 5 HOH A 11 411 27 HOH HOH . 
E 5 HOH A 12 412 45 HOH HOH . 
E 5 HOH A 13 413 97 HOH HOH . 
E 5 HOH A 14 414 89 HOH HOH . 
E 5 HOH A 15 415 113 HOH HOH . 
E 5 HOH A 16 416 118 HOH HOH . 
E 5 HOH A 17 417 102 HOH HOH . 
E 5 HOH A 18 418 1 HOH HOH . 
E 5 HOH A 19 419 41 HOH HOH . 
E 5 HOH A 20 420 79 HOH HOH . 
E 5 HOH A 21 421 46 HOH HOH . 
E 5 HOH A 22 422 49 HOH HOH . 
E 5 HOH A 23 423 33 HOH HOH . 
E 5 HOH A 24 424 39 HOH HOH . 
E 5 HOH A 25 425 24 HOH HOH . 
E 5 HOH A 26 426 116 HOH HOH . 
E 5 HOH A 27 427 6 HOH HOH . 
E 5 HOH A 28 428 77 HOH HOH . 
E 5 HOH A 29 429 7 HOH HOH . 
E 5 HOH A 30 430 42 HOH HOH . 
E 5 HOH A 31 431 111 HOH HOH . 
E 5 HOH A 32 432 63 HOH HOH . 
E 5 HOH A 33 433 8 HOH HOH . 
E 5 HOH A 34 434 93 HOH HOH . 
E 5 HOH A 35 435 25 HOH HOH . 
E 5 HOH A 36 436 117 HOH HOH . 
E 5 HOH A 37 437 29 HOH HOH . 
E 5 HOH A 38 438 11 HOH HOH . 
E 5 HOH A 39 439 64 HOH HOH . 
E 5 HOH A 40 440 34 HOH HOH . 
E 5 HOH A 41 441 3 HOH HOH . 
E 5 HOH A 42 442 110 HOH HOH . 
E 5 HOH A 43 443 43 HOH HOH . 
E 5 HOH A 44 444 81 HOH HOH . 
E 5 HOH A 45 445 121 HOH HOH . 
E 5 HOH A 46 446 73 HOH HOH . 
E 5 HOH A 47 447 123 HOH HOH . 
E 5 HOH A 48 448 66 HOH HOH . 
E 5 HOH A 49 449 52 HOH HOH . 
E 5 HOH A 50 450 56 HOH HOH . 
E 5 HOH A 51 451 30 HOH HOH . 
E 5 HOH A 52 452 38 HOH HOH . 
E 5 HOH A 53 453 13 HOH HOH . 
E 5 HOH A 54 454 17 HOH HOH . 
E 5 HOH A 55 455 35 HOH HOH . 
E 5 HOH A 56 456 2 HOH HOH . 
E 5 HOH A 57 457 72 HOH HOH . 
E 5 HOH A 58 458 109 HOH HOH . 
E 5 HOH A 59 459 55 HOH HOH . 
E 5 HOH A 60 460 115 HOH HOH . 
E 5 HOH A 61 461 5 HOH HOH . 
E 5 HOH A 62 462 9 HOH HOH . 
E 5 HOH A 63 463 22 HOH HOH . 
E 5 HOH A 64 464 100 HOH HOH . 
E 5 HOH A 65 465 92 HOH HOH . 
E 5 HOH A 66 466 37 HOH HOH . 
E 5 HOH A 67 467 129 HOH HOH . 
E 5 HOH A 68 468 120 HOH HOH . 
E 5 HOH A 69 469 40 HOH HOH . 
E 5 HOH A 70 470 16 HOH HOH . 
E 5 HOH A 71 471 23 HOH HOH . 
E 5 HOH A 72 472 67 HOH HOH . 
E 5 HOH A 73 473 20 HOH HOH . 
E 5 HOH A 74 474 108 HOH HOH . 
E 5 HOH A 75 475 4 HOH HOH . 
E 5 HOH A 76 476 130 HOH HOH . 
E 5 HOH A 77 477 44 HOH HOH . 
E 5 HOH A 78 478 105 HOH HOH . 
E 5 HOH A 79 479 114 HOH HOH . 
E 5 HOH A 80 480 19 HOH HOH . 
E 5 HOH A 81 481 15 HOH HOH . 
E 5 HOH A 82 482 53 HOH HOH . 
E 5 HOH A 83 483 14 HOH HOH . 
E 5 HOH A 84 484 74 HOH HOH . 
E 5 HOH A 85 485 124 HOH HOH . 
E 5 HOH A 86 486 65 HOH HOH . 
E 5 HOH A 87 487 59 HOH HOH . 
E 5 HOH A 88 488 122 HOH HOH . 
E 5 HOH A 89 489 10 HOH HOH . 
E 5 HOH A 90 490 71 HOH HOH . 
E 5 HOH A 91 491 85 HOH HOH . 
E 5 HOH A 92 492 88 HOH HOH . 
E 5 HOH A 93 493 80 HOH HOH . 
E 5 HOH A 94 494 95 HOH HOH . 
E 5 HOH A 95 495 90 HOH HOH . 
E 5 HOH A 96 496 112 HOH HOH . 
E 5 HOH A 97 497 12 HOH HOH . 
E 5 HOH A 98 498 58 HOH HOH . 
E 5 HOH A 99 499 32 HOH HOH . 
E 5 HOH A 100 500 101 HOH HOH . 
E 5 HOH A 101 501 83 HOH HOH . 
E 5 HOH A 102 502 133 HOH HOH . 
E 5 HOH A 103 503 70 HOH HOH . 
E 5 HOH A 104 504 47 HOH HOH . 
E 5 HOH A 105 505 36 HOH HOH . 
E 5 HOH A 106 506 125 HOH HOH . 
E 5 HOH A 107 507 96 HOH HOH . 
E 5 HOH A 108 508 57 HOH HOH . 
E 5 HOH A 109 509 21 HOH HOH . 
E 5 HOH A 110 510 69 HOH HOH . 
E 5 HOH A 111 511 31 HOH HOH . 
E 5 HOH A 112 512 50 HOH HOH . 
E 5 HOH A 113 513 26 HOH HOH . 
E 5 HOH A 114 514 78 HOH HOH . 
E 5 HOH A 115 515 107 HOH HOH . 
E 5 HOH A 116 516 106 HOH HOH . 
E 5 HOH A 117 517 18 HOH HOH . 
E 5 HOH A 118 518 87 HOH HOH . 
E 5 HOH A 119 519 99 HOH HOH . 
E 5 HOH A 120 520 82 HOH HOH . 
E 5 HOH A 121 521 131 HOH HOH . 
E 5 HOH A 122 522 127 HOH HOH . 
E 5 HOH A 123 523 126 HOH HOH . 
E 5 HOH A 124 524 91 HOH HOH . 
E 5 HOH A 125 525 75 HOH HOH . 
E 5 HOH A 126 526 94 HOH HOH . 
E 5 HOH A 127 527 98 HOH HOH . 
E 5 HOH A 128 528 68 HOH HOH . 
E 5 HOH A 129 529 76 HOH HOH . 
E 5 HOH A 130 530 128 HOH HOH . 
E 5 HOH A 131 531 51 HOH HOH . 
E 5 HOH A 132 532 132 HOH HOH . 
E 5 HOH A 133 533 134 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       4 
_atom_site.Cartn_x               0 
_atom_site.Cartn_y               -2.98 
_atom_site.Cartn_z               0 
_atom_site.occupancy             0.5 
_atom_site.B_iso_or_equiv        29.99 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           302 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              53 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           334 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           1 
#