data_8JK5 # _model_server_result.job_id hKlu23pDRcGAjyYj5Um46w _model_server_result.datetime_utc '2025-08-05 23:53:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8jk5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":304}' # _entry.id 8JK5 # _exptl.entry_id 8JK5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8JK5 _cell.length_a 69.051 _cell.length_b 69.051 _cell.length_c 88.266 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8JK5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_554 x-y,-y,-z-2/3 1 0 0 0 -1 0 0 0 -1 0 0 -58.844 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 29 A HIS 29 1_555 C FE FE . A FE 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? metalc ? metalc2 A NE2 HIS 58 A HIS 58 1_555 C FE FE . A FE 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? metalc ? metalc3 A OD1 ASP 59 A ASP 59 1_555 B FE FE . A FE 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? metalc ? metalc4 A OD2 ASP 59 A ASP 59 1_555 C FE FE . A FE 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.164 ? metalc ? metalc5 A NE2 HIS 91 A HIS 91 1_555 B FE FE . A FE 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.136 ? metalc ? metalc6 A NE2 HIS 117 A HIS 117 1_555 B FE FE . A FE 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.119 ? metalc ? metalc7 A OD1 ASP 135 A ASP 135 1_555 C FE FE . A FE 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? metalc ? metalc8 B FE FE . A FE 301 1_555 F O2 GOL . A GOL 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? metalc ? metalc9 B FE FE . A FE 301 1_555 G O HOH . A HOH 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.968 ? metalc ? metalc10 B FE FE . A FE 301 1_555 G O HOH . A HOH 457 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.144 ? metalc ? metalc11 C FE FE . A FE 302 1_555 G O HOH . A HOH 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? metalc ? metalc12 C FE FE . A FE 302 1_555 G O HOH . A HOH 421 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.201 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 303 n n S O2 SO4 doub 304 n n S O3 SO4 sing 305 n n S O4 SO4 sing 306 n n # _atom_sites.entry_id 8JK5 _atom_sites.fract_transf_matrix[1][1] 0.014482 _atom_sites.fract_transf_matrix[1][2] 0.008361 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016722 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011329 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FE A 1 301 1 FE FE . C 2 FE A 1 302 2 FE FE . D 3 SO4 A 1 303 1 SO4 SO4 . E 3 SO4 A 1 304 2 SO4 SO4 . F 4 GOL A 1 305 202 GOL GOL . G 5 HOH A 1 401 105 HOH HOH . G 5 HOH A 2 402 26 HOH HOH . G 5 HOH A 3 403 28 HOH HOH . G 5 HOH A 4 404 42 HOH HOH . G 5 HOH A 5 405 32 HOH HOH . G 5 HOH A 6 406 6 HOH HOH . G 5 HOH A 7 407 50 HOH HOH . G 5 HOH A 8 408 67 HOH HOH . G 5 HOH A 9 409 102 HOH HOH . G 5 HOH A 10 410 1 HOH HOH . G 5 HOH A 11 411 11 HOH HOH . G 5 HOH A 12 412 38 HOH HOH . G 5 HOH A 13 413 5 HOH HOH . G 5 HOH A 14 414 83 HOH HOH . G 5 HOH A 15 415 59 HOH HOH . G 5 HOH A 16 416 22 HOH HOH . G 5 HOH A 17 417 29 HOH HOH . G 5 HOH A 18 418 78 HOH HOH . G 5 HOH A 19 419 51 HOH HOH . G 5 HOH A 20 420 52 HOH HOH . G 5 HOH A 21 421 2 HOH HOH . G 5 HOH A 22 422 4 HOH HOH . G 5 HOH A 23 423 66 HOH HOH . G 5 HOH A 24 424 10 HOH HOH . G 5 HOH A 25 425 69 HOH HOH . G 5 HOH A 26 426 47 HOH HOH . G 5 HOH A 27 427 21 HOH HOH . G 5 HOH A 28 428 57 HOH HOH . G 5 HOH A 29 429 100 HOH HOH . G 5 HOH A 30 430 48 HOH HOH . G 5 HOH A 31 431 92 HOH HOH . G 5 HOH A 32 432 37 HOH HOH . G 5 HOH A 33 433 39 HOH HOH . G 5 HOH A 34 434 23 HOH HOH . G 5 HOH A 35 435 15 HOH HOH . G 5 HOH A 36 436 90 HOH HOH . G 5 HOH A 37 437 91 HOH HOH . G 5 HOH A 38 438 44 HOH HOH . G 5 HOH A 39 439 17 HOH HOH . G 5 HOH A 40 440 31 HOH HOH . G 5 HOH A 41 441 68 HOH HOH . G 5 HOH A 42 442 40 HOH HOH . G 5 HOH A 43 443 109 HOH HOH . G 5 HOH A 44 444 8 HOH HOH . G 5 HOH A 45 445 58 HOH HOH . G 5 HOH A 46 446 61 HOH HOH . G 5 HOH A 47 447 76 HOH HOH . G 5 HOH A 48 448 81 HOH HOH . G 5 HOH A 49 449 7 HOH HOH . G 5 HOH A 50 450 41 HOH HOH . G 5 HOH A 51 451 72 HOH HOH . G 5 HOH A 52 452 89 HOH HOH . G 5 HOH A 53 453 60 HOH HOH . G 5 HOH A 54 454 27 HOH HOH . G 5 HOH A 55 455 64 HOH HOH . G 5 HOH A 56 456 46 HOH HOH . G 5 HOH A 57 457 3 HOH HOH . G 5 HOH A 58 458 33 HOH HOH . G 5 HOH A 59 459 70 HOH HOH . G 5 HOH A 60 460 20 HOH HOH . G 5 HOH A 61 461 24 HOH HOH . G 5 HOH A 62 462 19 HOH HOH . G 5 HOH A 63 463 71 HOH HOH . G 5 HOH A 64 464 43 HOH HOH . G 5 HOH A 65 465 45 HOH HOH . G 5 HOH A 66 466 108 HOH HOH . G 5 HOH A 67 467 36 HOH HOH . G 5 HOH A 68 468 88 HOH HOH . G 5 HOH A 69 469 18 HOH HOH . G 5 HOH A 70 470 12 HOH HOH . G 5 HOH A 71 471 16 HOH HOH . G 5 HOH A 72 472 49 HOH HOH . G 5 HOH A 73 473 30 HOH HOH . G 5 HOH A 74 474 73 HOH HOH . G 5 HOH A 75 475 55 HOH HOH . G 5 HOH A 76 476 13 HOH HOH . G 5 HOH A 77 477 14 HOH HOH . G 5 HOH A 78 478 63 HOH HOH . G 5 HOH A 79 479 79 HOH HOH . G 5 HOH A 80 480 94 HOH HOH . G 5 HOH A 81 481 62 HOH HOH . G 5 HOH A 82 482 110 HOH HOH . G 5 HOH A 83 483 35 HOH HOH . G 5 HOH A 84 484 9 HOH HOH . G 5 HOH A 85 485 98 HOH HOH . G 5 HOH A 86 486 85 HOH HOH . G 5 HOH A 87 487 34 HOH HOH . G 5 HOH A 88 488 77 HOH HOH . G 5 HOH A 89 489 65 HOH HOH . G 5 HOH A 90 490 107 HOH HOH . G 5 HOH A 91 491 106 HOH HOH . G 5 HOH A 92 492 25 HOH HOH . G 5 HOH A 93 493 96 HOH HOH . G 5 HOH A 94 494 101 HOH HOH . G 5 HOH A 95 495 74 HOH HOH . G 5 HOH A 96 496 54 HOH HOH . G 5 HOH A 97 497 95 HOH HOH . G 5 HOH A 98 498 75 HOH HOH . G 5 HOH A 99 499 53 HOH HOH . G 5 HOH A 100 500 80 HOH HOH . G 5 HOH A 101 501 97 HOH HOH . G 5 HOH A 102 502 93 HOH HOH . G 5 HOH A 103 503 84 HOH HOH . G 5 HOH A 104 504 82 HOH HOH . G 5 HOH A 105 505 99 HOH HOH . G 5 HOH A 106 506 87 HOH HOH . G 5 HOH A 107 507 56 HOH HOH . G 5 HOH A 108 508 86 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . E 3 24.177 -6.996 -14.874 1 64.86 ? S SO4 304 A 1 HETATM 2 O O1 SO4 . . . E 3 25.3 -6.963 -15.842 1 64.75 ? O1 SO4 304 A 1 HETATM 3 O O2 SO4 . . . E 3 22.984 -6.352 -15.471 1 65.77 ? O2 SO4 304 A 1 HETATM 4 O O3 SO4 . . . E 3 23.866 -8.407 -14.538 1 67.22 ? O3 SO4 304 A 1 HETATM 5 O O4 SO4 . . . E 3 24.564 -6.268 -13.644 1 64.55 ? O4 SO4 304 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 340 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #