data_8JOJ
#
_model_server_result.job_id            v0i39kcnbbZoye1YkXRChw 
_model_server_result.datetime_utc      '2024-10-12 08:29:50' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8joj 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":601}' 
#
_entry.id    8JOJ 
#
_exptl.entry_id    8JOJ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            8JOJ 
_cell.length_a            119.603 
_cell.length_b            119.603 
_cell.length_c            117.304 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8JOJ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        151 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31 1 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 83 n n 
PA O2A FAD sing 84 n n 
PA O5B FAD sing 85 n n 
PA O3P FAD sing 86 n n 
O2A HOA2 FAD sing 87 n n 
O5B C5B FAD sing 88 n n 
C5B C4B FAD sing 89 n n 
C5B H51A FAD sing 90 n n 
C5B H52A FAD sing 91 n n 
C4B O4B FAD sing 92 n n 
C4B C3B FAD sing 93 n n 
C4B H4B FAD sing 94 n n 
O4B C1B FAD sing 95 n n 
C3B O3B FAD sing 96 n n 
C3B C2B FAD sing 97 n n 
C3B H3B FAD sing 98 n n 
O3B HO3A FAD sing 99 n n 
C2B O2B FAD sing 100 n n 
C2B C1B FAD sing 101 n n 
C2B H2B FAD sing 102 n n 
O2B HO2A FAD sing 103 n n 
C1B N9A FAD sing 104 n n 
C1B H1B FAD sing 105 n n 
N9A C8A FAD sing 106 n y 
N9A C4A FAD sing 107 n y 
C8A N7A FAD doub 108 n y 
C8A H8A FAD sing 109 n n 
N7A C5A FAD sing 110 n y 
C5A C6A FAD sing 111 n y 
C5A C4A FAD doub 112 n y 
C6A N6A FAD sing 113 n n 
C6A N1A FAD doub 114 n y 
N6A H61A FAD sing 115 n n 
N6A H62A FAD sing 116 n n 
N1A C2A FAD sing 117 n y 
C2A N3A FAD doub 118 n y 
C2A H2A FAD sing 119 n n 
N3A C4A FAD sing 120 n y 
N1 C2 FAD sing 121 n n 
N1 C10 FAD doub 122 n n 
C2 O2 FAD doub 123 n n 
C2 N3 FAD sing 124 n n 
N3 C4 FAD sing 125 n n 
N3 HN3 FAD sing 126 n n 
C4 O4 FAD doub 127 n n 
C4 C4X FAD sing 128 n n 
C4X N5 FAD doub 129 n n 
C4X C10 FAD sing 130 n n 
N5 C5X FAD sing 131 n n 
C5X C6 FAD doub 132 n y 
C5X C9A FAD sing 133 n y 
C6 C7 FAD sing 134 n y 
C6 H6 FAD sing 135 n n 
C7 C7M FAD sing 136 n n 
C7 C8 FAD doub 137 n y 
C7M HM71 FAD sing 138 n n 
C7M HM72 FAD sing 139 n n 
C7M HM73 FAD sing 140 n n 
C8 C8M FAD sing 141 n n 
C8 C9 FAD sing 142 n y 
C8M HM81 FAD sing 143 n n 
C8M HM82 FAD sing 144 n n 
C8M HM83 FAD sing 145 n n 
C9 C9A FAD doub 146 n y 
C9 H9 FAD sing 147 n n 
C9A N10 FAD sing 148 n n 
N10 C10 FAD sing 149 n n 
N10 C1' FAD sing 150 n n 
C1' C2' FAD sing 151 n n 
C1' "H1'1" FAD sing 152 n n 
C1' "H1'2" FAD sing 153 n n 
C2' O2' FAD sing 154 n n 
C2' C3' FAD sing 155 n n 
C2' H2' FAD sing 156 n n 
O2' HO2' FAD sing 157 n n 
C3' O3' FAD sing 158 n n 
C3' C4' FAD sing 159 n n 
C3' H3' FAD sing 160 n n 
O3' HO3' FAD sing 161 n n 
C4' O4' FAD sing 162 n n 
C4' C5' FAD sing 163 n n 
C4' H4' FAD sing 164 n n 
O4' HO4' FAD sing 165 n n 
C5' O5' FAD sing 166 n n 
C5' "H5'1" FAD sing 167 n n 
C5' "H5'2" FAD sing 168 n n 
O5' P FAD sing 169 n n 
P O1P FAD doub 170 n n 
P O2P FAD sing 171 n n 
P O3P FAD sing 172 n n 
O2P HOP2 FAD sing 173 n n 
#
_atom_sites.entry_id                     8JOJ 
_atom_sites.fract_transf_matrix[1][1]    0.008361 
_atom_sites.fract_transf_matrix[1][2]    0.004827 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009654 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008525 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 FAD A 1 601 601 FAD FAD . 
C 3 UU0 A 1 602 701 UU0 LIG . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . B 2 -19.147 -35.557 -12.029 1 52.91 ? PA FAD 601 A 1 
HETATM 2 O O1A FAD . . . B 2 -18.385 -36.818 -12.204 1 62.11 ? O1A FAD 601 A 1 
HETATM 3 O O2A FAD . . . B 2 -20.518 -35.6 -12.621 1 59.94 ? O2A FAD 601 A 1 
HETATM 4 O O5B FAD . . . B 2 -19.242 -35.191 -10.474 1 55.13 ? O5B FAD 601 A 1 
HETATM 5 C C5B FAD . . . B 2 -20.199 -34.175 -10.054 1 57.16 ? C5B FAD 601 A 1 
HETATM 6 C C4B FAD . . . B 2 -20.993 -34.637 -8.856 1 55.92 ? C4B FAD 601 A 1 
HETATM 7 O O4B FAD . . . B 2 -21.252 -33.476 -8.026 1 56.87 ? O4B FAD 601 A 1 
HETATM 8 C C3B FAD . . . B 2 -22.367 -35.254 -9.154 1 59.95 ? C3B FAD 601 A 1 
HETATM 9 O O3B FAD . . . B 2 -22.648 -36.427 -8.401 1 74.84 ? O3B FAD 601 A 1 
HETATM 10 C C2B FAD . . . B 2 -23.353 -34.173 -8.707 1 65.39 ? C2B FAD 601 A 1 
HETATM 11 O O2B FAD . . . B 2 -24.571 -34.702 -8.234 1 65.86 ? O2B FAD 601 A 1 
HETATM 12 C C1B FAD . . . B 2 -22.581 -33.517 -7.572 1 62.6 ? C1B FAD 601 A 1 
HETATM 13 N N9A FAD . . . B 2 -23.036 -32.151 -7.229 1 62.73 ? N9A FAD 601 A 1 
HETATM 14 C C8A FAD . . . B 2 -23.464 -31.162 -8.081 1 63.63 ? C8A FAD 601 A 1 
HETATM 15 N N7A FAD . . . B 2 -23.807 -30.06 -7.455 1 66.7 ? N7A FAD 601 A 1 
HETATM 16 C C5A FAD . . . B 2 -23.611 -30.352 -6.112 1 63.34 ? C5A FAD 601 A 1 
HETATM 17 C C6A FAD . . . B 2 -23.799 -29.598 -4.944 1 66.78 ? C6A FAD 601 A 1 
HETATM 18 N N6A FAD . . . B 2 -24.249 -28.345 -4.933 1 58.62 ? N6A FAD 601 A 1 
HETATM 19 N N1A FAD . . . B 2 -23.505 -30.204 -3.768 1 72.24 ? N1A FAD 601 A 1 
HETATM 20 C C2A FAD . . . B 2 -23.061 -31.467 -3.779 1 64.97 ? C2A FAD 601 A 1 
HETATM 21 N N3A FAD . . . B 2 -22.84 -32.264 -4.813 1 59.02 ? N3A FAD 601 A 1 
HETATM 22 C C4A FAD . . . B 2 -23.14 -31.638 -5.962 1 61.84 ? C4A FAD 601 A 1 
HETATM 23 N N1 FAD . . . B 2 -14.153 -38.868 -19.396 1 60.85 ? N1 FAD 601 A 1 
HETATM 24 C C2 FAD . . . B 2 -12.986 -39.523 -19.234 1 55.05 ? C2 FAD 601 A 1 
HETATM 25 O O2 FAD . . . B 2 -12.008 -38.961 -18.754 1 55.41 ? O2 FAD 601 A 1 
HETATM 26 N N3 FAD . . . B 2 -12.839 -40.802 -19.601 1 54.79 ? N3 FAD 601 A 1 
HETATM 27 C C4 FAD . . . B 2 -13.861 -41.514 -20.169 1 58.67 ? C4 FAD 601 A 1 
HETATM 28 O O4 FAD . . . B 2 -13.704 -42.705 -20.393 1 66.06 ? O4 FAD 601 A 1 
HETATM 29 C C4X FAD . . . B 2 -15.108 -40.896 -20.292 1 55.8 ? C4X FAD 601 A 1 
HETATM 30 N N5 FAD . . . B 2 -16.093 -41.581 -20.789 1 58.38 ? N5 FAD 601 A 1 
HETATM 31 C C5X FAD . . . B 2 -17.321 -40.987 -20.797 1 59.22 ? C5X FAD 601 A 1 
HETATM 32 C C6 FAD . . . B 2 -18.407 -41.767 -21.225 1 61.72 ? C6 FAD 601 A 1 
HETATM 33 C C7 FAD . . . B 2 -19.694 -41.302 -21.154 1 57.61 ? C7 FAD 601 A 1 
HETATM 34 C C7M FAD . . . B 2 -20.83 -42.2 -21.58 1 58.98 ? C7M FAD 601 A 1 
HETATM 35 C C8 FAD . . . B 2 -19.913 -39.975 -20.711 1 56.55 ? C8 FAD 601 A 1 
HETATM 36 C C8M FAD . . . B 2 -21.307 -39.411 -20.679 1 60.92 ? C8M FAD 601 A 1 
HETATM 37 C C9 FAD . . . B 2 -18.844 -39.163 -20.387 1 54.57 ? C9 FAD 601 A 1 
HETATM 38 C C9A FAD . . . B 2 -17.533 -39.664 -20.366 1 56.78 ? C9A FAD 601 A 1 
HETATM 39 N N10 FAD . . . B 2 -16.421 -38.92 -19.975 1 57.09 ? N10 FAD 601 A 1 
HETATM 40 C C10 FAD . . . B 2 -15.186 -39.529 -19.872 1 55.77 ? C10 FAD 601 A 1 
HETATM 41 C C1' FAD . . . B 2 -16.58 -37.541 -19.462 1 63.81 ? C1' FAD 601 A 1 
HETATM 42 C C2' FAD . . . B 2 -16.553 -37.484 -17.929 1 66.77 ? C2' FAD 601 A 1 
HETATM 43 O O2' FAD . . . B 2 -17.515 -38.411 -17.42 1 70.54 ? O2' FAD 601 A 1 
HETATM 44 C C3' FAD . . . B 2 -16.827 -36.118 -17.279 1 66.25 ? C3' FAD 601 A 1 
HETATM 45 O O3' FAD . . . B 2 -16.301 -35.02 -18.016 1 58.45 ? O3' FAD 601 A 1 
HETATM 46 C C4' FAD . . . B 2 -16.229 -36.059 -15.873 1 69.84 ? C4' FAD 601 A 1 
HETATM 47 O O4' FAD . . . B 2 -16.628 -37.21 -15.125 1 77.62 ? O4' FAD 601 A 1 
HETATM 48 C C5' FAD . . . B 2 -16.662 -34.829 -15.12 1 71.37 ? C5' FAD 601 A 1 
HETATM 49 O O5' FAD . . . B 2 -16.364 -35.033 -13.724 1 69.25 ? O5' FAD 601 A 1 
HETATM 50 P P FAD . . . B 2 -16.797 -33.907 -12.694 1 67.7 ? P FAD 601 A 1 
HETATM 51 O O1P FAD . . . B 2 -16.199 -34.106 -11.339 1 76.76 ? O1P FAD 601 A 1 
HETATM 52 O O2P FAD . . . B 2 -16.532 -32.618 -13.4 1 71.42 ? O2P FAD 601 A 1 
HETATM 53 O O3P FAD . . . B 2 -18.351 -34.304 -12.647 1 59.48 ? O3P FAD 601 A 1 
HETATM 54 H H51A FAD . . . B 2 -20.826 -33.978 -10.793 1 57.16 ? H51A FAD 601 A 1 
HETATM 55 H H52A FAD . . . B 2 -19.722 -33.342 -9.816 1 57.16 ? H52A FAD 601 A 1 
HETATM 56 H H4B FAD . . . B 2 -20.449 -35.284 -8.358 1 55.92 ? H4B FAD 601 A 1 
HETATM 57 H H3B FAD . . . B 2 -22.467 -35.424 -10.126 1 59.95 ? H3B FAD 601 A 1 
HETATM 58 H H2B FAD . . . B 2 -23.516 -33.523 -9.441 1 65.39 ? H2B FAD 601 A 1 
HETATM 59 H H1B FAD . . . B 2 -22.646 -34.084 -6.77 1 62.6 ? H1B FAD 601 A 1 
HETATM 60 H H8A FAD . . . B 2 -23.509 -31.258 -9.017 1 63.63 ? H8A FAD 601 A 1 
HETATM 61 H H2A FAD . . . B 2 -22.871 -31.841 -2.932 1 64.97 ? H2A FAD 601 A 1 
HETATM 62 H HN3 FAD . . . B 2 -12.044 -41.169 -19.512 1 54.79 ? HN3 FAD 601 A 1 
HETATM 63 H H6 FAD . . . B 2 -18.243 -42.64 -21.573 1 61.72 ? H6 FAD 601 A 1 
HETATM 64 H HM71 FAD . . . B 2 -21.671 -41.722 -21.495 1 58.98 ? HM71 FAD 601 A 1 
HETATM 65 H HM72 FAD . . . B 2 -20.849 -42.989 -21.016 1 58.98 ? HM72 FAD 601 A 1 
HETATM 66 H HM73 FAD . . . B 2 -20.703 -42.468 -22.504 1 58.98 ? HM73 FAD 601 A 1 
HETATM 67 H HM81 FAD . . . B 2 -21.274 -38.477 -20.414 1 60.92 ? HM81 FAD 601 A 1 
HETATM 68 H HM82 FAD . . . B 2 -21.843 -39.908 -20.042 1 60.92 ? HM82 FAD 601 A 1 
HETATM 69 H HM83 FAD . . . B 2 -21.706 -39.482 -21.56 1 60.92 ? HM83 FAD 601 A 1 
HETATM 70 H H9 FAD . . . B 2 -19.01 -38.26 -20.122 1 54.57 ? H9 FAD 601 A 1 
HETATM 71 H "H1'1" FAD . . . B 2 -17.439 -37.18 -19.766 1 63.81 ? "H1'1" FAD 601 A 1 
HETATM 72 H "H1'2" FAD . . . B 2 -15.849 -36.983 -19.801 1 63.81 ? "H1'2" FAD 601 A 1 
HETATM 73 H H2' FAD . . . B 2 -15.645 -37.781 -17.664 1 66.77 ? H2' FAD 601 A 1 
HETATM 74 H H3' FAD . . . B 2 -17.805 -35.966 -17.209 1 66.25 ? H3' FAD 601 A 1 
HETATM 75 H H4' FAD . . . B 2 -15.228 -36.055 -15.945 1 69.84 ? H4' FAD 601 A 1 
HETATM 76 H "H5'1" FAD . . . B 2 -17.624 -34.693 -15.245 1 71.37 ? "H5'1" FAD 601 A 1 
HETATM 77 H "H5'2" FAD . . . B 2 -16.174 -34.05 -15.461 1 71.37 ? "H5'2" FAD 601 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           331 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           77 
#