data_8JPC
#
_model_server_result.job_id            '_ShsEvZguIVpZSZvgG6E_g' 
_model_server_result.datetime_utc      '2024-11-13 15:44:47' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8jpc 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":701}' 
#
_entry.id    8JPC 
#
_exptl.entry_id    8JPC 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              466.531 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            STAUROSPORINE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8JPC 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8JPC 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      6 
_struct_asym.id                             F 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 B SG CYS 141 R CYS 141 1_555 B SG CYS 224 R CYS 224 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.294 ? 
metalc ? metalc1 D OG SER 47 Q SER 53 1_555 H MG MG . Q MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.898 ? 
metalc ? metalc2 D OG1 THR 180 Q THR 186 1_555 H MG MG . Q MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.498 ? 
metalc ? metalc3 G O3B GDP . Q GDP 401 1_555 H MG MG . Q MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.865 ? 
#
_chem_comp.formula           'C28 H26 N4 O3' 
_chem_comp.formula_weight    466.531 
_chem_comp.id                STU 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              STAUROSPORINE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O4 C25 STU sing 405 n n 
O4 C21 STU sing 406 n n 
C25 C24 STU sing 407 n n 
C25 N3 STU sing 408 n n 
C25 H25 STU sing 409 n n 
C24 C23 STU sing 410 n n 
C24 H241 STU sing 411 n n 
C24 H242 STU sing 412 n n 
C23 C22 STU sing 413 n n 
C23 N4 STU sing 414 n n 
C23 H23 STU sing 415 n n 
C22 C21 STU sing 416 n n 
C22 O6 STU sing 417 n n 
C22 H22 STU sing 418 n n 
C21 C26 STU sing 419 n n 
C21 N2 STU sing 420 n n 
C26 H261 STU sing 421 n n 
C26 H262 STU sing 422 n n 
C26 H263 STU sing 423 n n 
N2 C18 STU sing 424 n y 
N2 C17 STU sing 425 n y 
C18 C19 STU doub 426 n y 
C18 C11 STU sing 427 n y 
C19 C6 STU sing 428 n y 
C19 N3 STU sing 429 n y 
C6 C7 STU doub 430 n y 
C6 C5 STU sing 431 n y 
C7 C10 STU sing 432 n y 
C7 C8 STU sing 433 n n 
C10 C11 STU doub 434 n y 
C10 C9 STU sing 435 n n 
C11 C12 STU sing 436 n y 
C12 C17 STU doub 437 n y 
C12 C13 STU sing 438 n y 
C17 C16 STU sing 439 n y 
C16 C15 STU doub 440 n y 
C16 H16 STU sing 441 n n 
C15 C14 STU sing 442 n y 
C15 H15 STU sing 443 n n 
C14 C13 STU doub 444 n y 
C14 H14 STU sing 445 n n 
C13 H13 STU sing 446 n n 
C9 N1 STU sing 447 n n 
C9 H91 STU sing 448 n n 
C9 H92 STU sing 449 n n 
N1 C8 STU sing 450 n n 
N1 HN1 STU sing 451 n n 
C8 O5 STU doub 452 n n 
C5 C20 STU doub 453 n y 
C5 C4 STU sing 454 n y 
C20 C1 STU sing 455 n y 
C20 N3 STU sing 456 n y 
C1 C2 STU doub 457 n y 
C1 H1 STU sing 458 n n 
C2 C3 STU sing 459 n y 
C2 H2 STU sing 460 n n 
C3 C4 STU doub 461 n y 
C3 H3 STU sing 462 n n 
C4 H4 STU sing 463 n n 
O6 C27 STU sing 464 n n 
C27 H271 STU sing 465 n n 
C27 H272 STU sing 466 n n 
C27 H273 STU sing 467 n n 
N4 C28 STU sing 468 n n 
N4 HN4 STU sing 469 n n 
C28 H281 STU sing 470 n n 
C28 H282 STU sing 471 n n 
C28 H283 STU sing 472 n n 
#
_atom_sites.entry_id                     8JPC 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 5 SRW R 1 501 401 SRW LIG . 
F 6 STU G 1 701 701 STU STU . 
G 7 GDP Q 1 401 360 GDP GDP . 
H 8 MG Q 1 402 361 MG MG . 
I 9 ALF Q 1 403 362 ALF ALF . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O4 STU . . . F 6 138.396 112.624 122.419 1 92.31 ? O4 STU 701 G 1 
HETATM 2 C C25 STU . . . F 6 137.059 112.319 122.178 1 90.44 ? C25 STU 701 G 1 
HETATM 3 C C24 STU . . . F 6 136.815 110.845 121.942 1 98.63 ? C24 STU 701 G 1 
HETATM 4 C C23 STU . . . F 6 138.13 110.127 122.244 1 98.13 ? C23 STU 701 G 1 
HETATM 5 C C22 STU . . . F 6 139.159 110.654 121.247 1 101.36 ? C22 STU 701 G 1 
HETATM 6 C C21 STU . . . F 6 139.354 112.123 121.545 1 93.87 ? C21 STU 701 G 1 
HETATM 7 C C26 STU . . . F 6 140.646 112.2 122.349 1 98.66 ? C26 STU 701 G 1 
HETATM 8 N N2 STU . . . F 6 139.508 112.914 120.325 1 96.97 ? N2 STU 701 G 1 
HETATM 9 C C18 STU . . . F 6 138.46 113.602 119.734 1 103.13 ? C18 STU 701 G 1 
HETATM 10 C C19 STU . . . F 6 137.12 113.709 120.11 1 100.71 ? C19 STU 701 G 1 
HETATM 11 C C6 STU . . . F 6 136.239 114.466 119.346 1 98.86 ? C6 STU 701 G 1 
HETATM 12 C C7 STU . . . F 6 136.708 115.126 118.192 1 89.84 ? C7 STU 701 G 1 
HETATM 13 C C10 STU . . . F 6 138.037 115.012 117.828 1 86.23 ? C10 STU 701 G 1 
HETATM 14 C C11 STU . . . F 6 138.912 114.259 118.587 1 95.41 ? C11 STU 701 G 1 
HETATM 15 C C12 STU . . . F 6 140.324 113.944 118.478 1 92.32 ? C12 STU 701 G 1 
HETATM 16 C C17 STU . . . F 6 140.644 113.116 119.57 1 93.52 ? C17 STU 701 G 1 
HETATM 17 C C16 STU . . . F 6 141.949 112.661 119.715 1 98.25 ? C16 STU 701 G 1 
HETATM 18 C C15 STU . . . F 6 142.875 113.052 118.773 1 91.91 ? C15 STU 701 G 1 
HETATM 19 C C14 STU . . . F 6 142.547 113.863 117.709 1 90.51 ? C14 STU 701 G 1 
HETATM 20 C C13 STU . . . F 6 141.265 114.332 117.537 1 94.87 ? C13 STU 701 G 1 
HETATM 21 C C9 STU . . . F 6 138.218 115.819 116.573 1 88.67 ? C9 STU 701 G 1 
HETATM 22 N N1 STU . . . F 6 136.905 116.382 116.27 1 92.65 ? N1 STU 701 G 1 
HETATM 23 C C8 STU . . . F 6 136.039 115.979 117.207 1 95.82 ? C8 STU 701 G 1 
HETATM 24 O O5 STU . . . F 6 134.864 116.276 117.238 1 104.37 ? O5 STU 701 G 1 
HETATM 25 C C5 STU . . . F 6 134.948 114.362 120.013 1 97.07 ? C5 STU 701 G 1 
HETATM 26 C C20 STU . . . F 6 135.138 113.54 121.14 1 86.78 ? C20 STU 701 G 1 
HETATM 27 C C1 STU . . . F 6 134.082 113.249 121.989 1 88.95 ? C1 STU 701 G 1 
HETATM 28 C C2 STU . . . F 6 132.857 113.797 121.676 1 92.59 ? C2 STU 701 G 1 
HETATM 29 C C3 STU . . . F 6 132.669 114.6 120.572 1 92.16 ? C3 STU 701 G 1 
HETATM 30 C C4 STU . . . F 6 133.703 114.905 119.712 1 95.71 ? C4 STU 701 G 1 
HETATM 31 N N3 STU . . . F 6 136.469 113.164 121.156 1 88.29 ? N3 STU 701 G 1 
HETATM 32 O O6 STU . . . F 6 138.583 110.556 119.948 1 100.36 ? O6 STU 701 G 1 
HETATM 33 C C27 STU . . . F 6 139.407 109.683 119.182 1 94.64 ? C27 STU 701 G 1 
HETATM 34 N N4 STU . . . F 6 137.964 108.681 122.08 1 97.87 ? N4 STU 701 G 1 
HETATM 35 C C28 STU . . . F 6 137.366 108.188 123.326 1 96.17 ? C28 STU 701 G 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    49 
_model_server_stats.query_time_ms           304 
_model_server_stats.encode_time_ms          11 
_model_server_stats.element_count           35 
#