data_8JQQ # _model_server_result.job_id GBsF5-8Xne7QjwLLOmCPVw _model_server_result.datetime_utc '2024-11-14 07:00:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8jqq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":402}' # _entry.id 8JQQ # _exptl.entry_id 8JQQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8JQQ _cell.length_a 66.961 _cell.length_b 87.816 _cell.length_c 128.617 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8JQQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 154 A ASP 134 1_555 D CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.663 ? metalc ? metalc2 A OD2 ASP 154 A ASP 134 1_555 D CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.426 ? metalc ? metalc3 A OD1 ASP 257 A ASP 237 1_555 D CA CA . A CA 402 1_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.378 ? metalc ? metalc4 A OD2 ASP 257 A ASP 237 1_555 D CA CA . A CA 402 1_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.71 ? metalc ? metalc5 D CA CA . A CA 402 4_555 B OD2 ASP 250 B ASP 230 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8JQQ _atom_sites.fract_transf_matrix[1][1] 0.014934 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011387 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007775 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FAD A 1 401 401 FAD FAD . D 3 CA A 1 402 1 CA CA . E 2 FAD B 1 401 401 FAD FAD . F 4 HOH A 1 501 14 HOH HOH . F 4 HOH A 2 502 104 HOH HOH . F 4 HOH A 3 503 57 HOH HOH . F 4 HOH A 4 504 8 HOH HOH . F 4 HOH A 5 505 119 HOH HOH . F 4 HOH A 6 506 109 HOH HOH . F 4 HOH A 7 507 132 HOH HOH . F 4 HOH A 8 508 36 HOH HOH . F 4 HOH A 9 509 117 HOH HOH . F 4 HOH A 10 510 22 HOH HOH . F 4 HOH A 11 511 116 HOH HOH . F 4 HOH A 12 512 39 HOH HOH . F 4 HOH A 13 513 46 HOH HOH . F 4 HOH A 14 514 25 HOH HOH . F 4 HOH A 15 515 34 HOH HOH . F 4 HOH A 16 516 32 HOH HOH . F 4 HOH A 17 517 48 HOH HOH . F 4 HOH A 18 518 78 HOH HOH . F 4 HOH A 19 519 3 HOH HOH . F 4 HOH A 20 520 29 HOH HOH . F 4 HOH A 21 521 21 HOH HOH . F 4 HOH A 22 522 28 HOH HOH . F 4 HOH A 23 523 105 HOH HOH . F 4 HOH A 24 524 133 HOH HOH . F 4 HOH A 25 525 91 HOH HOH . F 4 HOH A 26 526 62 HOH HOH . F 4 HOH A 27 527 120 HOH HOH . F 4 HOH A 28 528 15 HOH HOH . F 4 HOH A 29 529 55 HOH HOH . F 4 HOH A 30 530 11 HOH HOH . F 4 HOH A 31 531 128 HOH HOH . F 4 HOH A 32 532 89 HOH HOH . F 4 HOH A 33 533 68 HOH HOH . F 4 HOH A 34 534 50 HOH HOH . F 4 HOH A 35 535 124 HOH HOH . F 4 HOH A 36 536 12 HOH HOH . F 4 HOH A 37 537 31 HOH HOH . F 4 HOH A 38 538 20 HOH HOH . F 4 HOH A 39 539 9 HOH HOH . F 4 HOH A 40 540 49 HOH HOH . F 4 HOH A 41 541 26 HOH HOH . F 4 HOH A 42 542 23 HOH HOH . F 4 HOH A 43 543 96 HOH HOH . F 4 HOH A 44 544 85 HOH HOH . F 4 HOH A 45 545 99 HOH HOH . F 4 HOH A 46 546 59 HOH HOH . F 4 HOH A 47 547 70 HOH HOH . F 4 HOH A 48 548 5 HOH HOH . F 4 HOH A 49 549 110 HOH HOH . F 4 HOH A 50 550 47 HOH HOH . F 4 HOH A 51 551 61 HOH HOH . F 4 HOH A 52 552 7 HOH HOH . F 4 HOH A 53 553 142 HOH HOH . F 4 HOH A 54 554 30 HOH HOH . F 4 HOH A 55 555 94 HOH HOH . F 4 HOH A 56 556 83 HOH HOH . F 4 HOH A 57 557 54 HOH HOH . F 4 HOH A 58 558 123 HOH HOH . F 4 HOH A 59 559 41 HOH HOH . F 4 HOH A 60 560 53 HOH HOH . F 4 HOH A 61 561 37 HOH HOH . F 4 HOH A 62 562 44 HOH HOH . F 4 HOH A 63 563 1 HOH HOH . F 4 HOH A 64 564 103 HOH HOH . F 4 HOH A 65 565 115 HOH HOH . F 4 HOH A 66 566 13 HOH HOH . F 4 HOH A 67 567 114 HOH HOH . F 4 HOH A 68 568 136 HOH HOH . F 4 HOH A 69 569 74 HOH HOH . F 4 HOH A 70 570 112 HOH HOH . F 4 HOH A 71 571 82 HOH HOH . F 4 HOH A 72 572 51 HOH HOH . F 4 HOH A 73 573 143 HOH HOH . F 4 HOH A 74 574 16 HOH HOH . F 4 HOH A 75 575 80 HOH HOH . F 4 HOH A 76 576 88 HOH HOH . F 4 HOH A 77 577 111 HOH HOH . F 4 HOH A 78 578 122 HOH HOH . F 4 HOH A 79 579 125 HOH HOH . F 4 HOH A 80 580 93 HOH HOH . F 4 HOH A 81 581 84 HOH HOH . F 4 HOH A 82 582 97 HOH HOH . F 4 HOH A 83 583 42 HOH HOH . F 4 HOH A 84 584 71 HOH HOH . F 4 HOH A 85 585 118 HOH HOH . F 4 HOH A 86 586 75 HOH HOH . G 4 HOH B 1 501 140 HOH HOH . G 4 HOH B 2 502 92 HOH HOH . G 4 HOH B 3 503 138 HOH HOH . G 4 HOH B 4 504 40 HOH HOH . G 4 HOH B 5 505 6 HOH HOH . G 4 HOH B 6 506 101 HOH HOH . G 4 HOH B 7 507 27 HOH HOH . G 4 HOH B 8 508 90 HOH HOH . G 4 HOH B 9 509 127 HOH HOH . G 4 HOH B 10 510 35 HOH HOH . G 4 HOH B 11 511 135 HOH HOH . G 4 HOH B 12 512 18 HOH HOH . G 4 HOH B 13 513 10 HOH HOH . G 4 HOH B 14 514 134 HOH HOH . G 4 HOH B 15 515 24 HOH HOH . G 4 HOH B 16 516 19 HOH HOH . G 4 HOH B 17 517 81 HOH HOH . G 4 HOH B 18 518 108 HOH HOH . G 4 HOH B 19 519 102 HOH HOH . G 4 HOH B 20 520 76 HOH HOH . G 4 HOH B 21 521 4 HOH HOH . G 4 HOH B 22 522 139 HOH HOH . G 4 HOH B 23 523 38 HOH HOH . G 4 HOH B 24 524 43 HOH HOH . G 4 HOH B 25 525 113 HOH HOH . G 4 HOH B 26 526 33 HOH HOH . G 4 HOH B 27 527 86 HOH HOH . G 4 HOH B 28 528 60 HOH HOH . G 4 HOH B 29 529 98 HOH HOH . G 4 HOH B 30 530 126 HOH HOH . G 4 HOH B 31 531 79 HOH HOH . G 4 HOH B 32 532 141 HOH HOH . G 4 HOH B 33 533 69 HOH HOH . G 4 HOH B 34 534 66 HOH HOH . G 4 HOH B 35 535 45 HOH HOH . G 4 HOH B 36 536 65 HOH HOH . G 4 HOH B 37 537 52 HOH HOH . G 4 HOH B 38 538 17 HOH HOH . G 4 HOH B 39 539 77 HOH HOH . G 4 HOH B 40 540 137 HOH HOH . G 4 HOH B 41 541 87 HOH HOH . G 4 HOH B 42 542 2 HOH HOH . G 4 HOH B 43 543 100 HOH HOH . G 4 HOH B 44 544 63 HOH HOH . G 4 HOH B 45 545 56 HOH HOH . G 4 HOH B 46 546 64 HOH HOH . G 4 HOH B 47 547 73 HOH HOH . G 4 HOH B 48 548 95 HOH HOH . G 4 HOH B 49 549 106 HOH HOH . G 4 HOH B 50 550 58 HOH HOH . G 4 HOH B 51 551 107 HOH HOH . G 4 HOH B 52 552 67 HOH HOH . G 4 HOH B 53 553 72 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x -3.973 _atom_site.Cartn_y -0.521 _atom_site.Cartn_z -12.713 _atom_site.occupancy 0.56 _atom_site.B_iso_or_equiv 30.63 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 402 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 265 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #