data_8JT6 # _model_server_result.job_id 9qt0FVhjelghZHWZ9Yf4aQ _model_server_result.datetime_utc '2024-10-11 00:29:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8jt6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":504}' # _entry.id 8JT6 # _exptl.entry_id 8JT6 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 386.654 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CHOLESTEROL _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8JT6 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8JT6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 F N N ? 6 G N N ? 6 H N N ? 6 I N N ? 6 K N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id E _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 231 _struct_conn.ptnr1_auth_asym_id R _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 109 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id E _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 309 _struct_conn.ptnr2_auth_asym_id R _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 187 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.031 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C27 H46 O' _chem_comp.formula_weight 386.654 _chem_comp.id CLR _chem_comp.mon_nstd_flag . _chem_comp.name CHOLESTEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 CLR sing 70 n n C1 C10 CLR sing 71 n n C1 H11 CLR sing 72 n n C1 H12 CLR sing 73 n n C2 C3 CLR sing 74 n n C2 H21 CLR sing 75 n n C2 H22 CLR sing 76 n n C3 C4 CLR sing 77 n n C3 O1 CLR sing 78 n n C3 H3 CLR sing 79 n n C4 C5 CLR sing 80 n n C4 H41 CLR sing 81 n n C4 H42 CLR sing 82 n n C5 C6 CLR doub 83 n n C5 C10 CLR sing 84 n n C6 C7 CLR sing 85 n n C6 H6 CLR sing 86 n n C7 C8 CLR sing 87 n n C7 H71 CLR sing 88 n n C7 H72 CLR sing 89 n n C8 C9 CLR sing 90 n n C8 C14 CLR sing 91 n n C8 H8 CLR sing 92 n n C9 C10 CLR sing 93 n n C9 C11 CLR sing 94 n n C9 H9 CLR sing 95 n n C10 C19 CLR sing 96 n n C11 C12 CLR sing 97 n n C11 H111 CLR sing 98 n n C11 H112 CLR sing 99 n n C12 C13 CLR sing 100 n n C12 H121 CLR sing 101 n n C12 H122 CLR sing 102 n n C13 C14 CLR sing 103 n n C13 C17 CLR sing 104 n n C13 C18 CLR sing 105 n n C14 C15 CLR sing 106 n n C14 H14 CLR sing 107 n n C15 C16 CLR sing 108 n n C15 H151 CLR sing 109 n n C15 H152 CLR sing 110 n n C16 C17 CLR sing 111 n n C16 H161 CLR sing 112 n n C16 H162 CLR sing 113 n n C17 C20 CLR sing 114 n n C17 H17 CLR sing 115 n n C18 H181 CLR sing 116 n n C18 H182 CLR sing 117 n n C18 H183 CLR sing 118 n n C19 H191 CLR sing 119 n n C19 H192 CLR sing 120 n n C19 H193 CLR sing 121 n n C20 C21 CLR sing 122 n n C20 C22 CLR sing 123 n n C20 H20 CLR sing 124 n n C21 H211 CLR sing 125 n n C21 H212 CLR sing 126 n n C21 H213 CLR sing 127 n n C22 C23 CLR sing 128 n n C22 H221 CLR sing 129 n n C22 H222 CLR sing 130 n n C23 C24 CLR sing 131 n n C23 H231 CLR sing 132 n n C23 H232 CLR sing 133 n n C24 C25 CLR sing 134 n n C24 H241 CLR sing 135 n n C24 H242 CLR sing 136 n n C25 C26 CLR sing 137 n n C25 C27 CLR sing 138 n n C25 H25 CLR sing 139 n n C26 H261 CLR sing 140 n n C26 H262 CLR sing 141 n n C26 H263 CLR sing 142 n n C27 H271 CLR sing 143 n n C27 H272 CLR sing 144 n n C27 H273 CLR sing 145 n n O1 H1 CLR sing 146 n n # _atom_sites.entry_id 8JT6 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 6 CLR R 1 501 602 CLR CLR . G 6 CLR R 1 502 603 CLR CLR . H 6 CLR R 1 503 604 CLR CLR . I 6 CLR R 1 504 605 CLR CLR . J 7 PLM R 1 505 606 PLM PLM . K 6 CLR R 1 506 608 CLR CLR . L 7 PLM R 1 507 614 PLM PLM . M 8 J40 R 1 508 601 J40 J40 . N 9 EZX R 1 509 1 EZX LIG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CLR . . . I 6 137.263 129.742 136.047 1 22.13 ? C1 CLR 504 R 1 HETATM 2 C C2 CLR . . . I 6 137.57 130.36 137.47 1 22.13 ? C2 CLR 504 R 1 HETATM 3 C C3 CLR . . . I 6 136.252 130.6 138.272 1 22.13 ? C3 CLR 504 R 1 HETATM 4 C C4 CLR . . . I 6 135.493 129.262 138.462 1 22.13 ? C4 CLR 504 R 1 HETATM 5 C C5 CLR . . . I 6 135.266 128.561 137.16 1 22.13 ? C5 CLR 504 R 1 HETATM 6 C C6 CLR . . . I 6 133.927 128.202 136.754 1 22.13 ? C6 CLR 504 R 1 HETATM 7 C C7 CLR . . . I 6 133.702 127.3 135.578 1 22.13 ? C7 CLR 504 R 1 HETATM 8 C C8 CLR . . . I 6 134.963 126.857 134.904 1 22.13 ? C8 CLR 504 R 1 HETATM 9 C C9 CLR . . . I 6 135.965 128.071 134.848 1 22.13 ? C9 CLR 504 R 1 HETATM 10 C C10 CLR . . . I 6 136.489 128.388 136.119 1 22.13 ? C10 CLR 504 R 1 HETATM 11 C C11 CLR . . . I 6 137.236 127.714 133.693 1 22.13 ? C11 CLR 504 R 1 HETATM 12 C C12 CLR . . . I 6 136.682 126.733 132.364 1 22.13 ? C12 CLR 504 R 1 HETATM 13 C C13 CLR . . . I 6 135.727 125.765 132.769 1 22.13 ? C13 CLR 504 R 1 HETATM 14 C C14 CLR . . . I 6 134.64 126.433 133.54 1 22.13 ? C14 CLR 504 R 1 HETATM 15 C C15 CLR . . . I 6 133.438 125.397 133.565 1 22.13 ? C15 CLR 504 R 1 HETATM 16 C C16 CLR . . . I 6 133.639 124.588 132.127 1 22.13 ? C16 CLR 504 R 1 HETATM 17 C C17 CLR . . . I 6 134.97 125.13 131.533 1 22.13 ? C17 CLR 504 R 1 HETATM 18 C C18 CLR . . . I 6 136.428 124.674 133.587 1 22.13 ? C18 CLR 504 R 1 HETATM 19 C C19 CLR . . . I 6 137.46 127.294 136.691 1 22.13 ? C19 CLR 504 R 1 HETATM 20 C C20 CLR . . . I 6 135.674 124.012 130.827 1 22.13 ? C20 CLR 504 R 1 HETATM 21 C C21 CLR . . . I 6 137.001 124.467 130.203 1 22.13 ? C21 CLR 504 R 1 HETATM 22 C C22 CLR . . . I 6 134.816 123.458 129.651 1 22.13 ? C22 CLR 504 R 1 HETATM 23 C C23 CLR . . . I 6 135.117 121.938 129.482 1 22.13 ? C23 CLR 504 R 1 HETATM 24 C C24 CLR . . . I 6 134.275 121.369 128.342 1 22.13 ? C24 CLR 504 R 1 HETATM 25 C C25 CLR . . . I 6 134.595 119.855 128.165 1 22.13 ? C25 CLR 504 R 1 HETATM 26 C C26 CLR . . . I 6 133.508 119.195 127.248 1 22.13 ? C26 CLR 504 R 1 HETATM 27 C C27 CLR . . . I 6 135.982 119.683 127.516 1 22.13 ? C27 CLR 504 R 1 HETATM 28 O O1 CLR . . . I 6 136.558 131.121 139.499 1 22.13 ? O1 CLR 504 R 1 HETATM 29 H H11 CLR . . . I 6 136.67 130.452 135.489 1 22.13 ? H11 CLR 504 R 1 HETATM 30 H H12 CLR . . . I 6 138.201 129.583 135.527 1 22.13 ? H12 CLR 504 R 1 HETATM 31 H H21 CLR . . . I 6 138.207 129.673 138.027 1 22.13 ? H21 CLR 504 R 1 HETATM 32 H H22 CLR . . . I 6 138.085 131.305 137.342 1 22.13 ? H22 CLR 504 R 1 HETATM 33 H H3 CLR . . . I 6 135.626 131.292 137.731 1 22.13 ? H3 CLR 504 R 1 HETATM 34 H H41 CLR . . . I 6 136.076 128.615 139.114 1 22.13 ? H41 CLR 504 R 1 HETATM 35 H H42 CLR . . . I 6 134.537 129.464 138.921 1 22.13 ? H42 CLR 504 R 1 HETATM 36 H H6 CLR . . . I 6 133.076 128.578 137.316 1 22.13 ? H6 CLR 504 R 1 HETATM 37 H H71 CLR . . . I 6 133.167 126.423 135.935 1 22.13 ? H71 CLR 504 R 1 HETATM 38 H H72 CLR . . . I 6 133.08 127.826 134.852 1 22.13 ? H72 CLR 504 R 1 HETATM 39 H H8 CLR . . . I 6 135.376 126.041 135.476 1 22.13 ? H8 CLR 504 R 1 HETATM 40 H H9 CLR . . . I 6 135.421 128.929 134.486 1 22.13 ? H9 CLR 504 R 1 HETATM 41 H H111 CLR . . . I 6 137.611 128.649 133.296 1 22.13 ? H111 CLR 504 R 1 HETATM 42 H H112 CLR . . . I 6 138.051 127.192 134.186 1 22.13 ? H112 CLR 504 R 1 HETATM 43 H H121 CLR . . . I 6 136.239 127.379 131.607 1 22.13 ? H121 CLR 504 R 1 HETATM 44 H H122 CLR . . . I 6 137.547 126.236 131.952 1 22.13 ? H122 CLR 504 R 1 HETATM 45 H H14 CLR . . . I 6 134.324 127.304 132.985 1 22.13 ? H14 CLR 504 R 1 HETATM 46 H H151 CLR . . . I 6 133.533 124.716 134.406 1 22.13 ? H151 CLR 504 R 1 HETATM 47 H H152 CLR . . . I 6 132.485 125.913 133.582 1 22.13 ? H152 CLR 504 R 1 HETATM 48 H H161 CLR . . . I 6 133.714 123.528 132.303 1 22.13 ? H161 CLR 504 R 1 HETATM 49 H H162 CLR . . . I 6 132.804 124.81 131.452 1 22.13 ? H162 CLR 504 R 1 HETATM 50 H H17 CLR . . . I 6 134.74 125.915 130.818 1 22.13 ? H17 CLR 504 R 1 HETATM 51 H H181 CLR . . . I 6 135.699 123.967 133.956 1 22.13 ? H181 CLR 504 R 1 HETATM 52 H H182 CLR . . . I 6 136.955 125.117 134.422 1 22.13 ? H182 CLR 504 R 1 HETATM 53 H H183 CLR . . . I 6 137.157 124.153 132.971 1 22.13 ? H183 CLR 504 R 1 HETATM 54 H H191 CLR . . . I 6 138.48 127.658 136.643 1 22.13 ? H191 CLR 504 R 1 HETATM 55 H H192 CLR . . . I 6 137.2 127.09 137.733 1 22.13 ? H192 CLR 504 R 1 HETATM 56 H H193 CLR . . . I 6 137.382 126.37 136.115 1 22.13 ? H193 CLR 504 R 1 HETATM 57 H H20 CLR . . . I 6 135.86 123.205 131.514 1 22.13 ? H20 CLR 504 R 1 HETATM 58 H H211 CLR . . . I 6 137.803 124.33 130.906 1 22.13 ? H211 CLR 504 R 1 HETATM 59 H H212 CLR . . . I 6 136.931 125.509 129.928 1 22.13 ? H212 CLR 504 R 1 HETATM 60 H H213 CLR . . . I 6 137.207 123.872 129.309 1 22.13 ? H213 CLR 504 R 1 HETATM 61 H H221 CLR . . . I 6 133.747 123.59 129.836 1 22.13 ? H221 CLR 504 R 1 HETATM 62 H H222 CLR . . . I 6 135.082 123.982 128.731 1 22.13 ? H222 CLR 504 R 1 HETATM 63 H H231 CLR . . . I 6 136.169 121.803 129.258 1 22.13 ? H231 CLR 504 R 1 HETATM 64 H H232 CLR . . . I 6 134.877 121.422 130.395 1 22.13 ? H232 CLR 504 R 1 HETATM 65 H H241 CLR . . . I 6 134.503 121.897 127.425 1 22.13 ? H241 CLR 504 R 1 HETATM 66 H H242 CLR . . . I 6 133.216 121.491 128.577 1 22.13 ? H242 CLR 504 R 1 HETATM 67 H H25 CLR . . . I 6 134.589 119.372 129.133 1 22.13 ? H25 CLR 504 R 1 HETATM 68 H H261 CLR . . . I 6 132.518 119.34 127.692 1 22.13 ? H261 CLR 504 R 1 HETATM 69 H H262 CLR . . . I 6 133.712 118.124 127.154 1 22.13 ? H262 CLR 504 R 1 HETATM 70 H H263 CLR . . . I 6 133.534 119.655 126.266 1 22.13 ? H263 CLR 504 R 1 HETATM 71 H H271 CLR . . . I 6 136.744 119.794 128.265 1 22.13 ? H271 CLR 504 R 1 HETATM 72 H H272 CLR . . . I 6 136.122 120.443 126.736 1 22.13 ? H272 CLR 504 R 1 HETATM 73 H H273 CLR . . . I 6 136.054 118.688 127.071 1 22.13 ? H273 CLR 504 R 1 HETATM 74 H H1 CLR . . . I 6 137.182 131.824 139.395 1 22.13 ? H1 CLR 504 R 1 # _model_server_stats.io_time_ms 24 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 74 #