data_8JT6 # _model_server_result.job_id '_u8G-NNLjB-RW9wbvaHOVA' _model_server_result.datetime_utc '2024-10-11 00:24:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8jt6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":505}' # _entry.id 8JT6 # _exptl.entry_id 8JT6 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 256.424 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PALMITIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8JT6 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8JT6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 7 J N N ? 7 L N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id E _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 231 _struct_conn.ptnr1_auth_asym_id R _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 109 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id E _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 309 _struct_conn.ptnr2_auth_asym_id R _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 187 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.031 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C16 H32 O2' _chem_comp.formula_weight 256.424 _chem_comp.id PLM _chem_comp.mon_nstd_flag . _chem_comp.name 'PALMITIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PLM sing 516 n n C1 O2 PLM doub 517 n n C1 C2 PLM sing 518 n n O1 H PLM sing 519 n n C2 C3 PLM sing 520 n n C2 H21 PLM sing 521 n n C2 H22 PLM sing 522 n n C3 C4 PLM sing 523 n n C3 H31 PLM sing 524 n n C3 H32 PLM sing 525 n n C4 C5 PLM sing 526 n n C4 H41 PLM sing 527 n n C4 H42 PLM sing 528 n n C5 C6 PLM sing 529 n n C5 H51 PLM sing 530 n n C5 H52 PLM sing 531 n n C6 C7 PLM sing 532 n n C6 H61 PLM sing 533 n n C6 H62 PLM sing 534 n n C7 C8 PLM sing 535 n n C7 H71 PLM sing 536 n n C7 H72 PLM sing 537 n n C8 C9 PLM sing 538 n n C8 H81 PLM sing 539 n n C8 H82 PLM sing 540 n n C9 CA PLM sing 541 n n C9 H91 PLM sing 542 n n C9 H92 PLM sing 543 n n CA CB PLM sing 544 n n CA HA1 PLM sing 545 n n CA HA2 PLM sing 546 n n CB CC PLM sing 547 n n CB HB1 PLM sing 548 n n CB HB2 PLM sing 549 n n CC CD PLM sing 550 n n CC HC1 PLM sing 551 n n CC HC2 PLM sing 552 n n CD CE PLM sing 553 n n CD HD1 PLM sing 554 n n CD HD2 PLM sing 555 n n CE CF PLM sing 556 n n CE HE1 PLM sing 557 n n CE HE2 PLM sing 558 n n CF CG PLM sing 559 n n CF HF1 PLM sing 560 n n CF HF2 PLM sing 561 n n CG HG1 PLM sing 562 n n CG HG2 PLM sing 563 n n CG HG3 PLM sing 564 n n # _atom_sites.entry_id 8JT6 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 6 CLR R 1 501 602 CLR CLR . G 6 CLR R 1 502 603 CLR CLR . H 6 CLR R 1 503 604 CLR CLR . I 6 CLR R 1 504 605 CLR CLR . J 7 PLM R 1 505 606 PLM PLM . K 6 CLR R 1 506 608 CLR CLR . L 7 PLM R 1 507 614 PLM PLM . M 8 J40 R 1 508 601 J40 J40 . N 9 EZX R 1 509 1 EZX LIG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PLM . . . J 7 146.244 125.647 128.518 1 23.29 ? C1 PLM 505 R 1 HETATM 2 O O1 PLM . . . J 7 145.778 125.999 127.4 1 23.29 ? O1 PLM 505 R 1 HETATM 3 O O2 PLM . . . J 7 147.063 126.256 129.261 1 23.29 ? O2 PLM 505 R 1 HETATM 4 C C2 PLM . . . J 7 145.719 124.262 129.036 1 23.29 ? C2 PLM 505 R 1 HETATM 5 C C3 PLM . . . J 7 144.24 124.221 129.429 1 23.29 ? C3 PLM 505 R 1 HETATM 6 C C4 PLM . . . J 7 143.759 122.848 129.928 1 23.29 ? C4 PLM 505 R 1 HETATM 7 C C5 PLM . . . J 7 142.318 122.853 130.463 1 23.29 ? C5 PLM 505 R 1 HETATM 8 C C6 PLM . . . J 7 142.154 123.544 131.825 1 23.29 ? C6 PLM 505 R 1 HETATM 9 C C7 PLM . . . J 7 140.711 123.541 132.356 1 23.29 ? C7 PLM 505 R 1 HETATM 10 C C8 PLM . . . J 7 140.57 124.086 133.785 1 23.29 ? C8 PLM 505 R 1 HETATM 11 C C9 PLM . . . J 7 140.792 125.602 133.897 1 23.29 ? C9 PLM 505 R 1 HETATM 12 C CA PLM . . . J 7 140.841 126.117 135.342 1 23.29 ? CA PLM 505 R 1 HETATM 13 C CB PLM . . . J 7 141.087 127.628 135.45 1 23.29 ? CB PLM 505 R 1 HETATM 14 C CC PLM . . . J 7 141.354 128.111 136.882 1 23.29 ? CC PLM 505 R 1 HETATM 15 C CD PLM . . . J 7 141.369 129.639 137.024 1 23.29 ? CD PLM 505 R 1 HETATM 16 C CE PLM . . . J 7 141.412 130.122 138.48 1 23.29 ? CE PLM 505 R 1 HETATM 17 C CF PLM . . . J 7 141.247 131.64 138.631 1 23.29 ? CF PLM 505 R 1 HETATM 18 C CG PLM . . . J 7 141.114 132.096 140.09 1 23.29 ? CG PLM 505 R 1 HETATM 19 H H21 PLM . . . J 7 145.934 123.515 128.257 1 23.29 ? H21 PLM 505 R 1 HETATM 20 H H22 PLM . . . J 7 146.347 123.98 129.897 1 23.29 ? H22 PLM 505 R 1 HETATM 21 H H31 PLM . . . J 7 144.062 124.981 130.199 1 23.29 ? H31 PLM 505 R 1 HETATM 22 H H32 PLM . . . J 7 143.635 124.536 128.567 1 23.29 ? H32 PLM 505 R 1 HETATM 23 H H41 PLM . . . J 7 143.835 122.112 129.111 1 23.29 ? H41 PLM 505 R 1 HETATM 24 H H42 PLM . . . J 7 144.434 122.489 130.721 1 23.29 ? H42 PLM 505 R 1 HETATM 25 H H51 PLM . . . J 7 141.664 123.346 129.727 1 23.29 ? H51 PLM 505 R 1 HETATM 26 H H52 PLM . . . J 7 141.958 121.815 130.539 1 23.29 ? H52 PLM 505 R 1 HETATM 27 H H61 PLM . . . J 7 142.508 124.581 131.75 1 23.29 ? H61 PLM 505 R 1 HETATM 28 H H62 PLM . . . J 7 142.809 123.052 132.561 1 23.29 ? H62 PLM 505 R 1 HETATM 29 H H71 PLM . . . J 7 140.078 124.135 131.679 1 23.29 ? H71 PLM 505 R 1 HETATM 30 H H72 PLM . . . J 7 140.315 122.515 132.319 1 23.29 ? H72 PLM 505 R 1 HETATM 31 H H81 PLM . . . J 7 139.57 123.838 134.17 1 23.29 ? H81 PLM 505 R 1 HETATM 32 H H82 PLM . . . J 7 141.285 123.568 134.442 1 23.29 ? H82 PLM 505 R 1 HETATM 33 H H91 PLM . . . J 7 141.729 125.87 133.39 1 23.29 ? H91 PLM 505 R 1 HETATM 34 H H92 PLM . . . J 7 139.992 126.126 133.353 1 23.29 ? H92 PLM 505 R 1 HETATM 35 H HA1 PLM . . . J 7 139.897 125.867 135.849 1 23.29 ? HA1 PLM 505 R 1 HETATM 36 H HA2 PLM . . . J 7 141.631 125.582 135.889 1 23.29 ? HA2 PLM 505 R 1 HETATM 37 H HB1 PLM . . . J 7 141.94 127.901 134.812 1 23.29 ? HB1 PLM 505 R 1 HETATM 38 H HB2 PLM . . . J 7 140.218 128.166 135.042 1 23.29 ? HB2 PLM 505 R 1 HETATM 39 H HC1 PLM . . . J 7 140.592 127.692 137.555 1 23.29 ? HC1 PLM 505 R 1 HETATM 40 H HC2 PLM . . . J 7 142.318 127.707 137.225 1 23.29 ? HC2 PLM 505 R 1 HETATM 41 H HD1 PLM . . . J 7 142.238 130.044 136.483 1 23.29 ? HD1 PLM 505 R 1 HETATM 42 H HD2 PLM . . . J 7 140.48 130.057 136.53 1 23.29 ? HD2 PLM 505 R 1 HETATM 43 H HE1 PLM . . . J 7 142.366 129.816 138.937 1 23.29 ? HE1 PLM 505 R 1 HETATM 44 H HE2 PLM . . . J 7 140.622 129.615 139.054 1 23.29 ? HE2 PLM 505 R 1 HETATM 45 H HF1 PLM . . . J 7 142.108 132.145 138.168 1 23.29 ? HF1 PLM 505 R 1 HETATM 46 H HF2 PLM . . . J 7 140.362 131.964 138.065 1 23.29 ? HF2 PLM 505 R 1 HETATM 47 H HG1 PLM . . . J 7 140.984 133.182 140.16 1 23.29 ? HG1 PLM 505 R 1 HETATM 48 H HG2 PLM . . . J 7 142.004 131.829 140.672 1 23.29 ? HG2 PLM 505 R 1 HETATM 49 H HG3 PLM . . . J 7 140.248 131.626 140.575 1 23.29 ? HG3 PLM 505 R 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 49 #