data_8JT6 # _model_server_result.job_id mAJkBuT7jx6YCJnXVUeQJA _model_server_result.datetime_utc '2025-01-25 22:14:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8jt6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":506}' # _entry.id 8JT6 # _exptl.entry_id 8JT6 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 386.654 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CHOLESTEROL _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8JT6 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8JT6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 F N N ? 6 G N N ? 6 H N N ? 6 I N N ? 6 K N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id E _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 231 _struct_conn.ptnr1_auth_asym_id R _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 109 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id E _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 309 _struct_conn.ptnr2_auth_asym_id R _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 187 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.031 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C27 H46 O' _chem_comp.formula_weight 386.654 _chem_comp.id CLR _chem_comp.mon_nstd_flag . _chem_comp.name CHOLESTEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 CLR sing 70 n n C1 C10 CLR sing 71 n n C1 H11 CLR sing 72 n n C1 H12 CLR sing 73 n n C2 C3 CLR sing 74 n n C2 H21 CLR sing 75 n n C2 H22 CLR sing 76 n n C3 C4 CLR sing 77 n n C3 O1 CLR sing 78 n n C3 H3 CLR sing 79 n n C4 C5 CLR sing 80 n n C4 H41 CLR sing 81 n n C4 H42 CLR sing 82 n n C5 C6 CLR doub 83 n n C5 C10 CLR sing 84 n n C6 C7 CLR sing 85 n n C6 H6 CLR sing 86 n n C7 C8 CLR sing 87 n n C7 H71 CLR sing 88 n n C7 H72 CLR sing 89 n n C8 C9 CLR sing 90 n n C8 C14 CLR sing 91 n n C8 H8 CLR sing 92 n n C9 C10 CLR sing 93 n n C9 C11 CLR sing 94 n n C9 H9 CLR sing 95 n n C10 C19 CLR sing 96 n n C11 C12 CLR sing 97 n n C11 H111 CLR sing 98 n n C11 H112 CLR sing 99 n n C12 C13 CLR sing 100 n n C12 H121 CLR sing 101 n n C12 H122 CLR sing 102 n n C13 C14 CLR sing 103 n n C13 C17 CLR sing 104 n n C13 C18 CLR sing 105 n n C14 C15 CLR sing 106 n n C14 H14 CLR sing 107 n n C15 C16 CLR sing 108 n n C15 H151 CLR sing 109 n n C15 H152 CLR sing 110 n n C16 C17 CLR sing 111 n n C16 H161 CLR sing 112 n n C16 H162 CLR sing 113 n n C17 C20 CLR sing 114 n n C17 H17 CLR sing 115 n n C18 H181 CLR sing 116 n n C18 H182 CLR sing 117 n n C18 H183 CLR sing 118 n n C19 H191 CLR sing 119 n n C19 H192 CLR sing 120 n n C19 H193 CLR sing 121 n n C20 C21 CLR sing 122 n n C20 C22 CLR sing 123 n n C20 H20 CLR sing 124 n n C21 H211 CLR sing 125 n n C21 H212 CLR sing 126 n n C21 H213 CLR sing 127 n n C22 C23 CLR sing 128 n n C22 H221 CLR sing 129 n n C22 H222 CLR sing 130 n n C23 C24 CLR sing 131 n n C23 H231 CLR sing 132 n n C23 H232 CLR sing 133 n n C24 C25 CLR sing 134 n n C24 H241 CLR sing 135 n n C24 H242 CLR sing 136 n n C25 C26 CLR sing 137 n n C25 C27 CLR sing 138 n n C25 H25 CLR sing 139 n n C26 H261 CLR sing 140 n n C26 H262 CLR sing 141 n n C26 H263 CLR sing 142 n n C27 H271 CLR sing 143 n n C27 H272 CLR sing 144 n n C27 H273 CLR sing 145 n n O1 H1 CLR sing 146 n n # _atom_sites.entry_id 8JT6 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 6 CLR R 1 501 602 CLR CLR . G 6 CLR R 1 502 603 CLR CLR . H 6 CLR R 1 503 604 CLR CLR . I 6 CLR R 1 504 605 CLR CLR . J 7 PLM R 1 505 606 PLM PLM . K 6 CLR R 1 506 608 CLR CLR . L 7 PLM R 1 507 614 PLM PLM . M 8 J40 R 1 508 601 J40 J40 . N 9 EZX R 1 509 1 EZX LIG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CLR . . . K 6 113.524 145.817 127.785 1 30.63 ? C1 CLR 506 R 1 HETATM 2 C C2 CLR . . . K 6 113.42 145.644 126.216 1 30.63 ? C2 CLR 506 R 1 HETATM 3 C C3 CLR . . . K 6 114.339 146.667 125.477 1 30.63 ? C3 CLR 506 R 1 HETATM 4 C C4 CLR . . . K 6 115.813 146.433 125.891 1 30.63 ? C4 CLR 506 R 1 HETATM 5 C C5 CLR . . . K 6 115.981 146.505 127.375 1 30.63 ? C5 CLR 506 R 1 HETATM 6 C C6 CLR . . . K 6 117.056 147.285 127.945 1 30.63 ? C6 CLR 506 R 1 HETATM 7 C C7 CLR . . . K 6 117.299 147.307 129.425 1 30.63 ? C7 CLR 506 R 1 HETATM 8 C C8 CLR . . . K 6 116.505 146.299 130.196 1 30.63 ? C8 CLR 506 R 1 HETATM 9 C C9 CLR . . . K 6 115.037 146.254 129.628 1 30.63 ? C9 CLR 506 R 1 HETATM 10 C C10 CLR . . . K 6 114.979 145.685 128.34 1 30.63 ? C10 CLR 506 R 1 HETATM 11 C C11 CLR . . . K 6 114.01 145.391 130.758 1 30.63 ? C11 CLR 506 R 1 HETATM 12 C C12 CLR . . . K 6 114.494 145.614 132.417 1 30.63 ? C12 CLR 506 R 1 HETATM 13 C C13 CLR . . . K 6 115.901 145.719 132.566 1 30.63 ? C13 CLR 506 R 1 HETATM 14 C C14 CLR . . . K 6 116.444 146.713 131.599 1 30.63 ? C14 CLR 506 R 1 HETATM 15 C C15 CLR . . . K 6 117.893 147.08 132.133 1 30.63 ? C15 CLR 506 R 1 HETATM 16 C C16 CLR . . . K 6 117.714 146.914 133.778 1 30.63 ? C16 CLR 506 R 1 HETATM 17 C C17 CLR . . . K 6 116.286 146.334 133.97 1 30.63 ? C17 CLR 506 R 1 HETATM 18 C C18 CLR . . . K 6 116.525 144.33 132.386 1 30.63 ? C18 CLR 506 R 1 HETATM 19 C C19 CLR . . . K 6 115.396 144.171 128.304 1 30.63 ? C19 CLR 506 R 1 HETATM 20 C C20 CLR . . . K 6 116.314 145.385 135.13 1 30.63 ? C20 CLR 506 R 1 HETATM 21 C C21 CLR . . . K 6 114.922 144.806 135.428 1 30.63 ? C21 CLR 506 R 1 HETATM 22 C C22 CLR . . . K 6 116.814 146.099 136.425 1 30.63 ? C22 CLR 506 R 1 HETATM 23 C C23 CLR . . . K 6 115.983 147.384 136.733 1 30.63 ? C23 CLR 506 R 1 HETATM 24 C C24 CLR . . . K 6 115.879 147.601 138.244 1 30.63 ? C24 CLR 506 R 1 HETATM 25 C C25 CLR . . . K 6 117.25 148.055 138.826 1 30.63 ? C25 CLR 506 R 1 HETATM 26 C C26 CLR . . . K 6 117.412 149.605 138.649 1 30.63 ? C26 CLR 506 R 1 HETATM 27 C C27 CLR . . . K 6 117.304 147.707 140.326 1 30.63 ? C27 CLR 506 R 1 HETATM 28 O O1 CLR . . . K 6 114.215 146.498 124.126 1 30.63 ? O1 CLR 506 R 1 HETATM 29 H H11 CLR . . . K 6 113.143 146.795 128.043 1 30.63 ? H11 CLR 506 R 1 HETATM 30 H H12 CLR . . . K 6 112.901 145.064 128.256 1 30.63 ? H12 CLR 506 R 1 HETATM 31 H H21 CLR . . . K 6 113.724 144.632 125.948 1 30.63 ? H21 CLR 506 R 1 HETATM 32 H H22 CLR . . . K 6 112.393 145.805 125.909 1 30.63 ? H22 CLR 506 R 1 HETATM 33 H H3 CLR . . . K 6 114.047 147.67 125.746 1 30.63 ? H3 CLR 506 R 1 HETATM 34 H H41 CLR . . . K 6 116.126 145.449 125.546 1 30.63 ? H41 CLR 506 R 1 HETATM 35 H H42 CLR . . . K 6 116.432 147.188 125.43 1 30.63 ? H42 CLR 506 R 1 HETATM 36 H H6 CLR . . . K 6 117.719 147.84 127.287 1 30.63 ? H6 CLR 506 R 1 HETATM 37 H H71 CLR . . . K 6 118.358 147.114 129.584 1 30.63 ? H71 CLR 506 R 1 HETATM 38 H H72 CLR . . . K 6 117.06 148.303 129.8 1 30.63 ? H72 CLR 506 R 1 HETATM 39 H H8 CLR . . . K 6 116.992 145.342 130.093 1 30.63 ? H8 CLR 506 R 1 HETATM 40 H H9 CLR . . . K 6 114.68 147.269 129.563 1 30.63 ? H9 CLR 506 R 1 HETATM 41 H H111 CLR . . . K 6 112.996 145.758 130.646 1 30.63 ? H111 CLR 506 R 1 HETATM 42 H H112 CLR . . . K 6 114.023 144.329 130.535 1 30.63 ? H112 CLR 506 R 1 HETATM 43 H H121 CLR . . . K 6 114.138 144.753 132.978 1 30.63 ? H121 CLR 506 R 1 HETATM 44 H H122 CLR . . . K 6 114.026 146.511 132.799 1 30.63 ? H122 CLR 506 R 1 HETATM 45 H H14 CLR . . . K 6 115.831 147.602 131.657 1 30.63 ? H14 CLR 506 R 1 HETATM 46 H H151 CLR . . . K 6 118.633 146.378 131.754 1 30.63 ? H151 CLR 506 R 1 HETATM 47 H H152 CLR . . . K 6 118.153 148.1 131.879 1 30.63 ? H152 CLR 506 R 1 HETATM 48 H H161 CLR . . . K 6 118.452 146.231 134.163 1 30.63 ? H161 CLR 506 R 1 HETATM 49 H H162 CLR . . . K 6 117.796 147.892 134.267 1 30.63 ? H162 CLR 506 R 1 HETATM 50 H H17 CLR . . . K 6 115.604 147.153 134.181 1 30.63 ? H17 CLR 506 R 1 HETATM 51 H H181 CLR . . . K 6 117.602 144.402 132.434 1 30.63 ? H181 CLR 506 R 1 HETATM 52 H H182 CLR . . . K 6 116.174 143.662 133.163 1 30.63 ? H182 CLR 506 R 1 HETATM 53 H H183 CLR . . . K 6 116.23 143.911 131.426 1 30.63 ? H183 CLR 506 R 1 HETATM 54 H H191 CLR . . . K 6 115.706 143.835 129.284 1 30.63 ? H191 CLR 506 R 1 HETATM 55 H H192 CLR . . . K 6 114.548 143.568 127.969 1 30.63 ? H192 CLR 506 R 1 HETATM 56 H H193 CLR . . . K 6 116.226 144.044 127.602 1 30.63 ? H193 CLR 506 R 1 HETATM 57 H H20 CLR . . . K 6 116.994 144.579 134.922 1 30.63 ? H20 CLR 506 R 1 HETATM 58 H H211 CLR . . . K 6 114.166 145.5 135.105 1 30.63 ? H211 CLR 506 R 1 HETATM 59 H H212 CLR . . . K 6 114.819 144.64 136.489 1 30.63 ? H212 CLR 506 R 1 HETATM 60 H H213 CLR . . . K 6 114.798 143.855 134.902 1 30.63 ? H213 CLR 506 R 1 HETATM 61 H H221 CLR . . . K 6 116.723 145.406 137.268 1 30.63 ? H221 CLR 506 R 1 HETATM 62 H H222 CLR . . . K 6 117.865 146.37 136.316 1 30.63 ? H222 CLR 506 R 1 HETATM 63 H H231 CLR . . . K 6 116.469 148.241 136.281 1 30.63 ? H231 CLR 506 R 1 HETATM 64 H H232 CLR . . . K 6 114.992 147.286 136.327 1 30.63 ? H232 CLR 506 R 1 HETATM 65 H H241 CLR . . . K 6 115.138 148.364 138.444 1 30.63 ? H241 CLR 506 R 1 HETATM 66 H H242 CLR . . . K 6 115.573 146.67 138.724 1 30.63 ? H242 CLR 506 R 1 HETATM 67 H H25 CLR . . . K 6 118.055 147.548 138.311 1 30.63 ? H25 CLR 506 R 1 HETATM 68 H H261 CLR . . . K 6 117.37 149.861 137.585 1 30.63 ? H261 CLR 506 R 1 HETATM 69 H H262 CLR . . . K 6 116.605 150.118 139.179 1 30.63 ? H262 CLR 506 R 1 HETATM 70 H H263 CLR . . . K 6 118.368 149.918 139.058 1 30.63 ? H263 CLR 506 R 1 HETATM 71 H H271 CLR . . . K 6 117.415 146.646 140.443 1 30.63 ? H271 CLR 506 R 1 HETATM 72 H H272 CLR . . . K 6 118.158 148.218 140.791 1 30.63 ? H272 CLR 506 R 1 HETATM 73 H H273 CLR . . . K 6 116.379 148.031 140.808 1 30.63 ? H273 CLR 506 R 1 HETATM 74 H H1 CLR . . . K 6 113.312 146.63 123.875 1 30.63 ? H1 CLR 506 R 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 439 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 74 #