data_8JU9 # _model_server_result.job_id 21rYKrZToA2oaw3inE6EfA _model_server_result.datetime_utc '2024-11-18 07:33:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ju9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":703}' # _entry.id 8JU9 # _exptl.entry_id 8JU9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8JU9 _cell.length_a 74.319 _cell.length_b 82.855 _cell.length_c 138.622 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8JU9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall 'I 2 2' _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'point symmetry operation' ? ? -1 0 0 0 -1 0 0 0 1 74.319 82.855 0 3 'point symmetry operation' ? ? -1 0 0 0 1 0 0 0 -1 74.319 0 277.244 4 'point symmetry operation' ? ? 1 0 0 0 -1 0 0 0 -1 0 82.855 277.244 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 263 n n C1 C2 PEG sing 264 n n C1 H11 PEG sing 265 n n C1 H12 PEG sing 266 n n O1 HO1 PEG sing 267 n n C2 O2 PEG sing 268 n n C2 H21 PEG sing 269 n n C2 H22 PEG sing 270 n n O2 C3 PEG sing 271 n n C3 C4 PEG sing 272 n n C3 H31 PEG sing 273 n n C3 H32 PEG sing 274 n n C4 O4 PEG sing 275 n n C4 H41 PEG sing 276 n n C4 H42 PEG sing 277 n n O4 HO4 PEG sing 278 n n # _atom_sites.entry_id 8JU9 _atom_sites.fract_transf_matrix[1][1] 0.013456 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012069 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007214 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 KDP A 1 701 701 KDP KDP . C 3 PEG A 1 702 302 PEG PEG . D 3 PEG A 1 703 402 PEG PEG . E 4 PG5 A 1 704 602 PG5 PG5 . F 5 HOH A 1 801 48 HOH HOH . F 5 HOH A 2 802 32 HOH HOH . F 5 HOH A 3 803 29 HOH HOH . F 5 HOH A 4 804 45 HOH HOH . F 5 HOH A 5 805 20 HOH HOH . F 5 HOH A 6 806 90 HOH HOH . F 5 HOH A 7 807 30 HOH HOH . F 5 HOH A 8 808 25 HOH HOH . F 5 HOH A 9 809 22 HOH HOH . F 5 HOH A 10 810 57 HOH HOH . F 5 HOH A 11 811 21 HOH HOH . F 5 HOH A 12 812 80 HOH HOH . F 5 HOH A 13 813 17 HOH HOH . F 5 HOH A 14 814 31 HOH HOH . F 5 HOH A 15 815 56 HOH HOH . F 5 HOH A 16 816 4 HOH HOH . F 5 HOH A 17 817 6 HOH HOH . F 5 HOH A 18 818 54 HOH HOH . F 5 HOH A 19 819 1 HOH HOH . F 5 HOH A 20 820 42 HOH HOH . F 5 HOH A 21 821 61 HOH HOH . F 5 HOH A 22 822 12 HOH HOH . F 5 HOH A 23 823 11 HOH HOH . F 5 HOH A 24 824 40 HOH HOH . F 5 HOH A 25 825 7 HOH HOH . F 5 HOH A 26 826 37 HOH HOH . F 5 HOH A 27 827 82 HOH HOH . F 5 HOH A 28 828 28 HOH HOH . F 5 HOH A 29 829 72 HOH HOH . F 5 HOH A 30 830 71 HOH HOH . F 5 HOH A 31 831 58 HOH HOH . F 5 HOH A 32 832 26 HOH HOH . F 5 HOH A 33 833 47 HOH HOH . F 5 HOH A 34 834 13 HOH HOH . F 5 HOH A 35 835 2 HOH HOH . F 5 HOH A 36 836 97 HOH HOH . F 5 HOH A 37 837 41 HOH HOH . F 5 HOH A 38 838 50 HOH HOH . F 5 HOH A 39 839 53 HOH HOH . F 5 HOH A 40 840 9 HOH HOH . F 5 HOH A 41 841 33 HOH HOH . F 5 HOH A 42 842 69 HOH HOH . F 5 HOH A 43 843 44 HOH HOH . F 5 HOH A 44 844 35 HOH HOH . F 5 HOH A 45 845 68 HOH HOH . F 5 HOH A 46 846 51 HOH HOH . F 5 HOH A 47 847 38 HOH HOH . F 5 HOH A 48 848 18 HOH HOH . F 5 HOH A 49 849 34 HOH HOH . F 5 HOH A 50 850 15 HOH HOH . F 5 HOH A 51 851 95 HOH HOH . F 5 HOH A 52 852 81 HOH HOH . F 5 HOH A 53 853 43 HOH HOH . F 5 HOH A 54 854 23 HOH HOH . F 5 HOH A 55 855 8 HOH HOH . F 5 HOH A 56 856 3 HOH HOH . F 5 HOH A 57 857 73 HOH HOH . F 5 HOH A 58 858 75 HOH HOH . F 5 HOH A 59 859 19 HOH HOH . F 5 HOH A 60 860 79 HOH HOH . F 5 HOH A 61 861 46 HOH HOH . F 5 HOH A 62 862 10 HOH HOH . F 5 HOH A 63 863 55 HOH HOH . F 5 HOH A 64 864 14 HOH HOH . F 5 HOH A 65 865 36 HOH HOH . F 5 HOH A 66 866 84 HOH HOH . F 5 HOH A 67 867 125 HOH HOH . F 5 HOH A 68 868 24 HOH HOH . F 5 HOH A 69 869 5 HOH HOH . F 5 HOH A 70 870 116 HOH HOH . F 5 HOH A 71 871 74 HOH HOH . F 5 HOH A 72 872 65 HOH HOH . F 5 HOH A 73 873 52 HOH HOH . F 5 HOH A 74 874 121 HOH HOH . F 5 HOH A 75 875 89 HOH HOH . F 5 HOH A 76 876 66 HOH HOH . F 5 HOH A 77 877 96 HOH HOH . F 5 HOH A 78 878 78 HOH HOH . F 5 HOH A 79 879 76 HOH HOH . F 5 HOH A 80 880 93 HOH HOH . F 5 HOH A 81 881 63 HOH HOH . F 5 HOH A 82 882 119 HOH HOH . F 5 HOH A 83 883 120 HOH HOH . F 5 HOH A 84 884 94 HOH HOH . F 5 HOH A 85 885 83 HOH HOH . F 5 HOH A 86 886 108 HOH HOH . F 5 HOH A 87 887 124 HOH HOH . F 5 HOH A 88 888 27 HOH HOH . F 5 HOH A 89 889 70 HOH HOH . F 5 HOH A 90 890 122 HOH HOH . F 5 HOH A 91 891 62 HOH HOH . F 5 HOH A 92 892 91 HOH HOH . F 5 HOH A 93 893 64 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . D 3 19.756 36.965 166.79 1 50.47 ? C1 PEG 703 A 1 HETATM 2 O O1 PEG . . . D 3 18.667 37.65 166.227 1 61.09 ? O1 PEG 703 A 1 HETATM 3 C C2 PEG . . . D 3 20.231 37.761 168.005 1 59.18 ? C2 PEG 703 A 1 HETATM 4 O O2 PEG . . . D 3 21.591 38.058 167.897 1 57.73 ? O2 PEG 703 A 1 HETATM 5 C C3 PEG . . . D 3 22.172 38.712 169.005 1 58.87 ? C3 PEG 703 A 1 HETATM 6 C C4 PEG . . . D 3 21.233 39.696 169.71 1 60.87 ? C4 PEG 703 A 1 HETATM 7 O O4 PEG . . . D 3 21.978 40.731 170.3 1 64.87 ? O4 PEG 703 A 1 HETATM 8 H H11 PEG . . . D 3 19.48 36.077 167.065 1 60.6 ? H11 PEG 703 A 1 HETATM 9 H H12 PEG . . . D 3 20.473 36.895 166.141 1 60.6 ? H12 PEG 703 A 1 HETATM 10 H HO1 PEG . . . D 3 18.28 37.148 165.66 1 73.34 ? HO1 PEG 703 A 1 HETATM 11 H H21 PEG . . . D 3 19.728 38.589 168.061 1 71.04 ? H21 PEG 703 A 1 HETATM 12 H H22 PEG . . . D 3 20.082 37.237 168.807 1 71.04 ? H22 PEG 703 A 1 HETATM 13 H H31 PEG . . . D 3 22.95 39.201 168.696 1 70.67 ? H31 PEG 703 A 1 HETATM 14 H H32 PEG . . . D 3 22.446 38.038 169.647 1 70.67 ? H32 PEG 703 A 1 HETATM 15 H H41 PEG . . . D 3 20.733 39.227 170.397 1 73.07 ? H41 PEG 703 A 1 HETATM 16 H H42 PEG . . . D 3 20.617 40.072 169.062 1 73.07 ? H42 PEG 703 A 1 HETATM 17 H HO4 PEG . . . D 3 21.457 41.243 170.734 1 77.87 ? HO4 PEG 703 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 370 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 17 #