data_8JUR # _model_server_result.job_id 5rF9Nw6MJGQj2NBxll8HRw _model_server_result.datetime_utc '2025-01-23 17:21:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8jur # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":401}' # _entry.id 8JUR # _exptl.entry_id 8JUR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 306.438 _entity.id 2 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8JUR _cell.length_a 86.326 _cell.length_b 134.103 _cell.length_c 145.787 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8JUR _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 I N N ? 2 M N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ASP 43 A ASP 43 1_555 F NA NA . A NA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.638 ? metalc ? metalc2 A O ASN 44 A ASN 44 1_555 F NA NA . A NA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.361 ? metalc ? metalc3 A O GLY 46 A GLY 46 1_555 F NA NA . A NA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.5 ? metalc ? metalc4 A OE1 GLN 107 A GLN 107 1_555 G NA NA . A NA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.122 ? metalc ? metalc5 A OE1 GLN 146 A GLN 146 1_555 E NA NA . A NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.408 ? metalc ? metalc6 A OE1 GLN 149 A GLN 149 1_555 E NA NA . A NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.632 ? metalc ? metalc7 A O ARG 154 A ARG 154 1_555 G NA NA . A NA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.962 ? metalc ? metalc8 A OD2 ASP 156 A ASP 156 1_555 G NA NA . A NA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.723 ? metalc ? metalc9 A OD1 ASP 174 A ASP 174 1_555 E NA NA . A NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.822 ? metalc ? metalc10 F NA NA . A NA 403 1_555 C O GLY 181 C GLY 181 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.751 ? metalc ? metalc11 B O ASN 44 B ASN 44 1_555 K NA NA . B NA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.022 ? metalc ? metalc12 B O GLY 46 B GLY 46 1_555 K NA NA . B NA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.789 ? metalc ? metalc13 B O PRO 82 B PRO 82 1_555 J NA NA . B NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.898 ? metalc ? metalc14 B O GLY 85 B GLY 85 1_555 J NA NA . B NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.975 ? metalc ? metalc15 B OD1 ASP 174 B ASP 174 1_555 L NA NA . B NA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.929 ? metalc ? metalc16 B O GLY 181 B GLY 181 1_555 O NA NA . C NA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.832 ? metalc ? metalc17 C O ASP 43 C ASP 43 1_555 O NA NA . C NA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.819 ? metalc ? metalc18 C O ASN 44 C ASN 44 1_555 O NA NA . C NA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.693 ? metalc ? metalc19 C O GLY 46 C GLY 46 1_555 O NA NA . C NA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? metalc ? metalc20 C OE1 GLN 146 C GLN 146 1_555 N NA NA . C NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.785 ? metalc ? metalc21 C OE1 GLN 149 C GLN 149 1_555 N NA NA . C NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.632 ? metalc ? metalc22 C OD1 ASP 174 C ASP 174 1_555 N NA NA . C NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.975 ? metalc ? metalc23 C OD2 ASP 174 C ASP 174 1_555 N NA NA . C NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.124 ? # _chem_comp.formula 'C16 H34 O5' _chem_comp.formula_weight 306.438 _chem_comp.id C8E _chem_comp.mon_nstd_flag . _chem_comp.name (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 C8E sing 70 n n C1 H11 C8E sing 71 n n C1 H12 C8E sing 72 n n C1 H13 C8E sing 73 n n C2 C3 C8E sing 74 n n C2 H21 C8E sing 75 n n C2 H22 C8E sing 76 n n C3 C4 C8E sing 77 n n C3 H31 C8E sing 78 n n C3 H32 C8E sing 79 n n C4 C5 C8E sing 80 n n C4 H41 C8E sing 81 n n C4 H42 C8E sing 82 n n C5 C6 C8E sing 83 n n C5 H51 C8E sing 84 n n C5 H52 C8E sing 85 n n C6 C7 C8E sing 86 n n C6 H61 C8E sing 87 n n C6 H62 C8E sing 88 n n C7 C8 C8E sing 89 n n C7 H71 C8E sing 90 n n C7 H72 C8E sing 91 n n C8 O9 C8E sing 92 n n C8 H81 C8E sing 93 n n C8 H82 C8E sing 94 n n O9 C10 C8E sing 95 n n C10 C11 C8E sing 96 n n C10 H101 C8E sing 97 n n C10 H102 C8E sing 98 n n C11 O12 C8E sing 99 n n C11 H111 C8E sing 100 n n C11 H112 C8E sing 101 n n O12 C13 C8E sing 102 n n C13 C14 C8E sing 103 n n C13 H131 C8E sing 104 n n C13 H132 C8E sing 105 n n C14 O15 C8E sing 106 n n C14 H141 C8E sing 107 n n C14 H142 C8E sing 108 n n O15 C16 C8E sing 109 n n C16 C17 C8E sing 110 n n C16 H161 C8E sing 111 n n C16 H162 C8E sing 112 n n C17 O18 C8E sing 113 n n C17 H171 C8E sing 114 n n C17 H172 C8E sing 115 n n O18 C19 C8E sing 116 n n C19 C20 C8E sing 117 n n C19 H191 C8E sing 118 n n C19 H192 C8E sing 119 n n C20 O21 C8E sing 120 n n C20 H201 C8E sing 121 n n C20 H202 C8E sing 122 n n O21 HO2 C8E sing 123 n n # _atom_sites.entry_id 8JUR _atom_sites.fract_transf_matrix[1][1] 0.011584 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007457 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006859 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 C8E A 1 401 507 C8E C8E . E 3 NA A 1 402 2 NA NA . F 3 NA A 1 403 4 NA NA . G 3 NA A 1 404 8 NA NA . H 4 LLL A 1 405 51 LLL LLL . I 2 C8E B 1 401 506 C8E C8E . J 3 NA B 1 402 3 NA NA . K 3 NA B 1 403 5 NA NA . L 3 NA B 1 404 7 NA NA . M 2 C8E C 1 401 509 C8E C8E . N 3 NA C 1 402 1 NA NA . O 3 NA C 1 403 6 NA NA . P 5 HOH A 1 501 20 HOH HOH . P 5 HOH A 2 502 12 HOH HOH . P 5 HOH A 3 503 22 HOH HOH . P 5 HOH A 4 504 14 HOH HOH . P 5 HOH A 5 505 21 HOH HOH . P 5 HOH A 6 506 26 HOH HOH . P 5 HOH A 7 507 25 HOH HOH . P 5 HOH A 8 508 17 HOH HOH . P 5 HOH A 9 509 24 HOH HOH . Q 5 HOH B 1 501 19 HOH HOH . Q 5 HOH B 2 502 16 HOH HOH . Q 5 HOH B 3 503 18 HOH HOH . R 5 HOH C 1 501 13 HOH HOH . R 5 HOH C 2 502 15 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 C8E . . . D 2 -18.247 5.359 0.778 1 38.97 ? C1 C8E 401 A 1 HETATM 2 C C2 C8E . . . D 2 -17.21 4.477 0.087 1 54.38 ? C2 C8E 401 A 1 HETATM 3 C C3 C8E . . . D 2 -15.816 4.697 0.665 1 43.33 ? C3 C8E 401 A 1 HETATM 4 C C4 C8E . . . D 2 -14.821 3.633 0.2 1 41.33 ? C4 C8E 401 A 1 HETATM 5 C C5 C8E . . . D 2 -13.476 3.897 0.869 1 41.43 ? C5 C8E 401 A 1 HETATM 6 C C6 C8E . . . D 2 -12.49 2.796 0.532 1 38.82 ? C6 C8E 401 A 1 HETATM 7 C C7 C8E . . . D 2 -11.082 3.044 1.079 1 42.97 ? C7 C8E 401 A 1 HETATM 8 C C8 C8E . . . D 2 -10.124 2.039 0.422 1 49.43 ? C8 C8E 401 A 1 HETATM 9 O O9 C8E . . . D 2 -8.789 2.222 0.829 1 39.09 ? O9 C8E 401 A 1 HETATM 10 C C10 C8E . . . D 2 -8.141 1.005 1.113 1 41.67 ? C10 C8E 401 A 1 HETATM 11 C C11 C8E . . . D 2 -6.695 1.302 1.493 1 48.76 ? C11 C8E 401 A 1 HETATM 12 O O12 C8E . . . D 2 -6.113 0.24 2.221 1 53.58 ? O12 C8E 401 A 1 HETATM 13 C C13 C8E . . . D 2 -5.553 -0.698 1.332 1 51.1 ? C13 C8E 401 A 1 HETATM 14 C C14 C8E . . . D 2 -5.231 -2.003 2.05 1 52.19 ? C14 C8E 401 A 1 HETATM 15 O O15 C8E . . . D 2 -4.18 -2.616 1.333 1 60.38 ? O15 C8E 401 A 1 HETATM 16 C C16 C8E . . . D 2 -4.191 -4.026 1.404 1 63.07 ? C16 C8E 401 A 1 HETATM 17 C C17 C8E . . . D 2 -3.239 -4.443 2.516 1 60.07 ? C17 C8E 401 A 1 HETATM 18 O O18 C8E . . . D 2 -2.965 -5.826 2.463 1 57.99 ? O18 C8E 401 A 1 HETATM 19 C C19 C8E . . . D 2 -1.662 -6.094 1.986 1 75.45 ? C19 C8E 401 A 1 HETATM 20 C C20 C8E . . . D 2 -0.656 -6.102 3.131 1 57.69 ? C20 C8E 401 A 1 HETATM 21 O O21 C8E . . . D 2 -0.141 -4.802 3.308 1 44.97 ? O21 C8E 401 A 1 # _model_server_stats.io_time_ms 24 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 21 #