data_8JUX # _model_server_result.job_id pIJkfZ3Ax_O3k3TP9qlKBQ _model_server_result.datetime_utc '2024-12-18 23:03:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8jux # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":401}' # _entry.id 8JUX # _exptl.entry_id 8JUX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 420.519 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ~{N}-[(3-fluorophenyl)methyl]-1-[(1~{R})-1-(3-methoxynaphthalen-1-yl)ethyl]piperidine-4-carboxamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8JUX _cell.length_a 99.83 _cell.length_b 99.83 _cell.length_c 295.872 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8JUX _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,F 1 1 B,E,G 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N # _chem_comp.formula 'C26 H29 F N2 O2' _chem_comp.formula_weight 420.519 _chem_comp.id V00 _chem_comp.mon_nstd_flag . _chem_comp.name ~{N}-[(3-fluorophenyl)methyl]-1-[(1~{R})-1-(3-methoxynaphthalen-1-yl)ethyl]piperidine-4-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag F21 C20 V00 sing 358 n n C20 C22 V00 doub 359 n y C20 C19 V00 sing 360 n y C22 C16 V00 sing 361 n y C19 C18 V00 doub 362 n y C16 C15 V00 sing 363 n n C16 C17 V00 doub 364 n y C18 C17 V00 sing 365 n y C15 N14 V00 sing 366 n n O13 C12 V00 doub 367 n n C12 N14 V00 sing 368 n n C12 C11 V00 sing 369 n n C23 C11 V00 sing 370 n n C23 C24 V00 sing 371 n n C11 C10 V00 sing 372 n n C10 C09 V00 sing 373 n n C24 N08 V00 sing 374 n n C09 N08 V00 sing 375 n n N08 C06 V00 sing 376 n n C07 C06 V00 sing 377 n n C06 C05 V00 sing 378 n n C04 C05 V00 doub 379 n y C04 C03 V00 sing 380 n y C05 C25 V00 sing 381 n y O02 C03 V00 sing 382 n n O02 C01 V00 sing 383 n n C03 C31 V00 doub 384 n y C25 C26 V00 doub 385 n y C25 C30 V00 sing 386 n y C26 C27 V00 sing 387 n y C31 C30 V00 sing 388 n y C30 C29 V00 doub 389 n y C27 C28 V00 doub 390 n y C29 C28 V00 sing 391 n y C01 H1 V00 sing 392 n n C01 H2 V00 sing 393 n n C01 H3 V00 sing 394 n n C04 H4 V00 sing 395 n n C06 H5 V00 sing 396 n n C07 H6 V00 sing 397 n n C07 H7 V00 sing 398 n n C07 H8 V00 sing 399 n n C09 H10 V00 sing 400 n n C09 H11 V00 sing 401 n n C10 H12 V00 sing 402 n n C10 H13 V00 sing 403 n n C11 H14 V00 sing 404 n n N14 H15 V00 sing 405 n n C15 H16 V00 sing 406 n n C15 H17 V00 sing 407 n n C17 H18 V00 sing 408 n n C18 H19 V00 sing 409 n n C19 H20 V00 sing 410 n n C22 H21 V00 sing 411 n n C23 H22 V00 sing 412 n n C23 H23 V00 sing 413 n n C24 H24 V00 sing 414 n n C24 H25 V00 sing 415 n n C26 H26 V00 sing 416 n n C27 H27 V00 sing 417 n n C28 H28 V00 sing 418 n n C29 H29 V00 sing 419 n n C31 H30 V00 sing 420 n n # _atom_sites.entry_id 8JUX _atom_sites.fract_transf_matrix[1][1] 0.010017 _atom_sites.fract_transf_matrix[1][2] 0.005783 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011567 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00338 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 400 400 MG MG . D 3 V00 A 1 401 401 V00 S99 . E 3 V00 B 1 401 401 V00 S99 . F 4 HOH A 1 501 10 HOH HOH . F 4 HOH A 2 502 22 HOH HOH . F 4 HOH A 3 503 39 HOH HOH . F 4 HOH A 4 504 6 HOH HOH . F 4 HOH A 5 505 27 HOH HOH . G 4 HOH B 1 501 25 HOH HOH . G 4 HOH B 2 502 105 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 V00 . . . E 3 37.808 -4.998 100.293 1 103.94 ? C01 V00 401 B 1 HETATM 2 O O02 V00 . . . E 3 37.682 -4.552 101.613 1 109.84 ? O02 V00 401 B 1 HETATM 3 C C03 V00 . . . E 3 38.769 -3.803 102.092 1 127.33 ? C03 V00 401 B 1 HETATM 4 C C04 V00 . . . E 3 39.313 -2.778 101.304 1 123.02 ? C04 V00 401 B 1 HETATM 5 C C05 V00 . . . E 3 40.384 -2.008 101.768 1 147.15 ? C05 V00 401 B 1 HETATM 6 C C06 V00 . . . E 3 40.979 -0.887 100.871 1 131.41 ? C06 V00 401 B 1 HETATM 7 C C07 V00 . . . E 3 41.427 -1.473 99.526 1 106.63 ? C07 V00 401 B 1 HETATM 8 N N08 V00 . . . E 3 40.231 0.081 100.698 1 135.06 ? N08 V00 401 B 1 HETATM 9 C C09 V00 . . . E 3 40.918 1.143 99.985 1 114.91 ? C09 V00 401 B 1 HETATM 10 C C10 V00 . . . E 3 40.254 2.532 100.02 1 110.19 ? C10 V00 401 B 1 HETATM 11 C C11 V00 . . . E 3 39.838 2.884 101.352 1 92.85 ? C11 V00 401 B 1 HETATM 12 C C12 V00 . . . E 3 39.069 4.206 101.425 1 80.45 ? C12 V00 401 B 1 HETATM 13 O O13 V00 . . . E 3 38.253 4.479 100.612 1 113.62 ? O13 V00 401 B 1 HETATM 14 N N14 V00 . . . E 3 39.336 5.107 102.539 1 101.94 ? N14 V00 401 B 1 HETATM 15 C C15 V00 . . . E 3 38.622 6.368 102.69 1 105.05 ? C15 V00 401 B 1 HETATM 16 C C16 V00 . . . E 3 37.59 6.199 103.813 1 101.96 ? C16 V00 401 B 1 HETATM 17 C C17 V00 . . . E 3 36.821 5.045 103.879 1 128.34 ? C17 V00 401 B 1 HETATM 18 C C18 V00 . . . E 3 35.889 4.878 104.895 1 112.19 ? C18 V00 401 B 1 HETATM 19 C C19 V00 . . . E 3 35.727 5.866 105.854 1 119.54 ? C19 V00 401 B 1 HETATM 20 C C20 V00 . . . E 3 36.499 7.017 105.793 1 139.95 ? C20 V00 401 B 1 HETATM 21 C C22 V00 . . . E 3 37.431 7.186 104.774 1 106.97 ? C22 V00 401 B 1 HETATM 22 C C23 V00 . . . E 3 38.967 1.871 101.87 1 103.5 ? C23 V00 401 B 1 HETATM 23 C C24 V00 . . . E 3 39.692 0.534 101.957 1 149.32 ? C24 V00 401 B 1 HETATM 24 C C25 V00 . . . E 3 40.935 -2.302 103.07 1 152.79 ? C25 V00 401 B 1 HETATM 25 C C26 V00 . . . E 3 42.035 -1.547 103.58 1 144.49 ? C26 V00 401 B 1 HETATM 26 C C27 V00 . . . E 3 42.563 -1.822 104.839 1 135.96 ? C27 V00 401 B 1 HETATM 27 C C28 V00 . . . E 3 42.017 -2.842 105.62 1 158.44 ? C28 V00 401 B 1 HETATM 28 C C29 V00 . . . E 3 40.944 -3.581 105.131 1 148.11 ? C29 V00 401 B 1 HETATM 29 C C30 V00 . . . E 3 40.402 -3.301 103.84 1 137.33 ? C30 V00 401 B 1 HETATM 30 C C31 V00 . . . E 3 39.302 -4.069 103.354 1 126.26 ? C31 V00 401 B 1 HETATM 31 F F21 V00 . . . E 3 36.34 7.988 106.742 1 140.9 ? F21 V00 401 B 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 237 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 31 #