data_8K0T # _model_server_result.job_id SBonHLoyY6lWC21IEMNgpg _model_server_result.datetime_utc '2025-07-06 14:38:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8k0t # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":101}' # _entry.id 8K0T # _exptl.entry_id 8K0T _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 180.164 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description THEOPHYLLINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 113.32 _cell.angle_gamma 90 _cell.entry_id 8K0T _cell.length_a 62.747 _cell.length_b 41.244 _cell.length_c 34.157 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8K0T _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall 'C 2y' _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OP2 DC 14 A DC 14 1_555 C K K . A K 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? metalc ? metalc2 A OP2 DC 14 A DC 14 1_555 C K K . A K 102 2_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? metalc ? metalc3 E NA NA . A NA 104 1_555 F O HOH . A HOH 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.981 ? metalc ? metalc4 E NA NA . A NA 104 1_555 F O HOH . A HOH 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.737 ? hydrog WATSON-CRICK hydrog1 A N1 DG 1 A DG 1 1_555 A N3 DC 29 A DC 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 A N2 DG 1 A DG 1 1_555 A O2 DC 29 A DC 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 A O6 DG 1 A DG 1 1_555 A N4 DC 29 A DC 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 A N3 DC 2 A DC 2 1_555 A N1 DG 28 A DG 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 A N4 DC 2 A DC 2 1_555 A O6 DG 28 A DG 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 A O2 DC 2 A DC 2 1_555 A N2 DG 28 A DG 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 A N1 DG 3 A DG 3 1_555 A N3 DC 27 A DC 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 A N2 DG 3 A DG 3 1_555 A O2 DC 27 A DC 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 A O6 DG 3 A DG 3 1_555 A N4 DC 27 A DC 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 A N1 DG 4 A DG 4 1_555 A N3 DC 26 A DC 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 A N2 DG 4 A DG 4 1_555 A O2 DC 26 A DC 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 A O6 DG 4 A DG 4 1_555 A N4 DC 26 A DC 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_28_PAIR hydrog13 A N3 DT 5 A DT 5 1_555 A O6 DG 25 A DG 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_28_PAIR hydrog14 A O2 DT 5 A DT 5 1_555 A N1 DG 25 A DG 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_7_PAIR hydrog15 A N7 DG 6 A DG 6 1_555 A N1 DG 19 A DG 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_7_PAIR hydrog16 A O6 DG 6 A DG 6 1_555 A N2 DG 19 A DG 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog17 A N1 DG 6 A DG 6 1_555 A N3 DC 24 A DC 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog18 A N2 DG 6 A DG 6 1_555 A O2 DC 24 A DC 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog19 A O6 DG 6 A DG 6 1_555 A N4 DC 24 A DC 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_7_PAIR hydrog20 A N7 DG 7 A DG 7 1_555 A N1 DG 18 A DG 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_7_PAIR hydrog21 A O6 DG 7 A DG 7 1_555 A N2 DG 18 A DG 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog22 A N1 DG 7 A DG 7 1_555 A N3 DC 23 A DC 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog23 A N2 DG 7 A DG 7 1_555 A O2 DC 23 A DC 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog24 A O6 DG 7 A DG 7 1_555 A N4 DC 23 A DC 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog25 A N3 DC 9 A DC 9 1_555 A N1 DG 21 A DG 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog26 A N4 DC 9 A DC 9 1_555 A O6 DG 21 A DG 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog27 A O2 DC 9 A DC 9 1_555 A N2 DG 21 A DG 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog28 A N1 DA 11 A DA 11 1_555 A N3 DT 16 A DT 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog29 A N6 DA 11 A DA 11 1_555 A O4 DT 16 A DT 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog HOOGSTEEN hydrog30 A N3 DT 12 A DT 12 1_555 A N7 DA 15 A DA 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog HOOGSTEEN hydrog31 A O4 DT 12 A DT 12 1_555 A N6 DA 15 A DA 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'C7 H8 N4 O2' _chem_comp.formula_weight 180.164 _chem_comp.id TEP _chem_comp.mon_nstd_flag . _chem_comp.name THEOPHYLLINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 N1 TEP sing 152 n n C1 H11 TEP sing 153 n n C1 H12 TEP sing 154 n n C1 H13 TEP sing 155 n n N1 C2 TEP sing 156 n y N1 C6 TEP sing 157 n y C2 O2 TEP doub 158 n n C2 N3 TEP sing 159 n y N3 C3 TEP sing 160 n n N3 C4 TEP sing 161 n y C3 H31 TEP sing 162 n n C3 H32 TEP sing 163 n n C3 H33 TEP sing 164 n n C4 C5 TEP doub 165 n y C4 N9 TEP sing 166 n y C5 C6 TEP sing 167 n y C5 N7 TEP sing 168 n y C6 O6 TEP doub 169 n n N7 C8 TEP sing 170 n y N7 HN7 TEP sing 171 n n C8 N9 TEP doub 172 n y C8 H8 TEP sing 173 n n # _atom_sites.entry_id 8K0T _atom_sites.fract_transf_matrix[1][1] 0.015937 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00687 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.024246 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.031881 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TEP A 1 101 101 TEP TEP . C 3 K A 1 102 1 K K . D 4 IOD A 1 103 1 IOD IOD . E 5 NA A 1 104 1 NA NA . F 6 HOH A 1 201 1 HOH HOH . F 6 HOH A 2 202 5 HOH HOH . F 6 HOH A 3 203 3 HOH HOH . F 6 HOH A 4 204 4 HOH HOH . F 6 HOH A 5 205 2 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 TEP . . . B 2 -17.077 2.73 -6.678 1 65.86 ? C1 TEP 101 A 1 HETATM 2 N N1 TEP . . . B 2 -17.118 1.383 -7.239 1 64.12 ? N1 TEP 101 A 1 HETATM 3 C C2 TEP . . . B 2 -17.547 1.307 -8.554 1 64.44 ? C2 TEP 101 A 1 HETATM 4 O O2 TEP . . . B 2 -17.861 2.32 -9.169 1 65.57 ? O2 TEP 101 A 1 HETATM 5 N N3 TEP . . . B 2 -17.58 0.055 -9.117 1 64.88 ? N3 TEP 101 A 1 HETATM 6 C C3 TEP . . . B 2 -18.033 -0.122 -10.468 1 68.35 ? C3 TEP 101 A 1 HETATM 7 C C4 TEP . . . B 2 -17.23 -1.035 -8.404 1 63.99 ? C4 TEP 101 A 1 HETATM 8 C C5 TEP . . . B 2 -16.809 -0.938 -7.122 1 64.57 ? C5 TEP 101 A 1 HETATM 9 C C6 TEP . . . B 2 -16.745 0.311 -6.43 1 64.66 ? C6 TEP 101 A 1 HETATM 10 O O6 TEP . . . B 2 -16.391 0.477 -5.277 1 64.33 ? O6 TEP 101 A 1 HETATM 11 N N7 TEP . . . B 2 -16.559 -2.242 -6.747 1 63.55 ? N7 TEP 101 A 1 HETATM 12 C C8 TEP . . . B 2 -16.822 -3.002 -7.807 1 63.57 ? C8 TEP 101 A 1 HETATM 13 N N9 TEP . . . B 2 -17.264 -2.3 -8.83 1 63.37 ? N9 TEP 101 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 13 #