data_8K1P
#
_model_server_result.job_id            C6Kek9GrS8hnkwL4FupSYA 
_model_server_result.datetime_utc      '2024-12-26 22:46:01' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8k1p 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":402}' 
#
_entry.id    8K1P 
#
_exptl.entry_id    8K1P 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              507.181 
_entity.id                          7 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "ADENOSINE-5'-TRIPHOSPHATE" 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8K1P 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8K1P 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      7 
_struct_asym.id                             J 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 B OG SER 49 B SER 49 1_555 F MG MG . B MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.336 ? 
metalc ? metalc2 F MG MG . B MG 401 1_555 H O2 VO4 . B VO4 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.127 ? 
metalc ? metalc3 C OG SER 49 C SER 49 1_555 I MG MG . C MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? 
metalc ? metalc4 I MG MG . C MG 401 1_555 J O2B ATP . C ATP 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.667 ? 
metalc ? metalc5 I MG MG . C MG 401 1_555 J O3G ATP . C ATP 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.336 ? 
#
_chem_comp.formula           'C10 H16 N5 O13 P3' 
_chem_comp.formula_weight    507.181 
_chem_comp.id                ATP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "ADENOSINE-5'-TRIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G ATP doub 114 n n 
PG O2G ATP sing 115 n n 
PG O3G ATP sing 116 n n 
PG O3B ATP sing 117 n n 
O2G HOG2 ATP sing 118 n n 
O3G HOG3 ATP sing 119 n n 
PB O1B ATP doub 120 n n 
PB O2B ATP sing 121 n n 
PB O3B ATP sing 122 n n 
PB O3A ATP sing 123 n n 
O2B HOB2 ATP sing 124 n n 
PA O1A ATP doub 125 n n 
PA O2A ATP sing 126 n n 
PA O3A ATP sing 127 n n 
PA O5' ATP sing 128 n n 
O2A HOA2 ATP sing 129 n n 
O5' C5' ATP sing 130 n n 
C5' C4' ATP sing 131 n n 
C5' "H5'1" ATP sing 132 n n 
C5' "H5'2" ATP sing 133 n n 
C4' O4' ATP sing 134 n n 
C4' C3' ATP sing 135 n n 
C4' H4' ATP sing 136 n n 
O4' C1' ATP sing 137 n n 
C3' O3' ATP sing 138 n n 
C3' C2' ATP sing 139 n n 
C3' H3' ATP sing 140 n n 
O3' HO3' ATP sing 141 n n 
C2' O2' ATP sing 142 n n 
C2' C1' ATP sing 143 n n 
C2' H2' ATP sing 144 n n 
O2' HO2' ATP sing 145 n n 
C1' N9 ATP sing 146 n n 
C1' H1' ATP sing 147 n n 
N9 C8 ATP sing 148 n y 
N9 C4 ATP sing 149 n y 
C8 N7 ATP doub 150 n y 
C8 H8 ATP sing 151 n n 
N7 C5 ATP sing 152 n y 
C5 C6 ATP sing 153 n y 
C5 C4 ATP doub 154 n y 
C6 N6 ATP sing 155 n n 
C6 N1 ATP doub 156 n y 
N6 HN61 ATP sing 157 n n 
N6 HN62 ATP sing 158 n n 
N1 C2 ATP sing 159 n y 
C2 N3 ATP doub 160 n y 
C2 H2 ATP sing 161 n n 
N3 C4 ATP sing 162 n y 
#
_atom_sites.entry_id                     8K1P 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 3 CDL A 1 601 1 CDL CDL . 
E 3 CDL A 1 602 2 CDL CDL . 
F 4 MG B 1 401 301 MG MG . 
G 5 ADP B 1 402 401 ADP ADP . 
H 6 VO4 B 1 403 501 VO4 VO4 . 
I 4 MG C 1 401 301 MG MG . 
J 7 ATP C 1 402 302 ATP ATP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG ATP . . . J 7 149.278 142.644 132.622 1 19.5 ? PG ATP 402 C 1 
HETATM 2 O O1G ATP . . . J 7 148.933 143.908 131.942 1 19.5 ? O1G ATP 402 C 1 
HETATM 3 O O2G ATP . . . J 7 149.174 141.479 131.739 1 19.5 ? O2G ATP 402 C 1 
HETATM 4 O O3G ATP . . . J 7 150.584 142.711 133.326 1 19.5 ? O3G ATP 402 C 1 
HETATM 5 P PB ATP . . . J 7 148.211 140.916 134.511 1 19.5 ? PB ATP 402 C 1 
HETATM 6 O O1B ATP . . . J 7 147.748 139.876 133.587 1 19.5 ? O1B ATP 402 C 1 
HETATM 7 O O2B ATP . . . J 7 149.539 140.832 135.129 1 19.5 ? O2B ATP 402 C 1 
HETATM 8 O O3B ATP . . . J 7 148.197 142.294 133.723 1 19.5 ? O3B ATP 402 C 1 
HETATM 9 P PA ATP . . . J 7 147.184 140.45 137.169 1 19.5 ? PA ATP 402 C 1 
HETATM 10 O O1A ATP . . . J 7 148.227 141.133 137.964 1 19.5 ? O1A ATP 402 C 1 
HETATM 11 O O2A ATP . . . J 7 147.191 138.984 137.085 1 19.5 ? O2A ATP 402 C 1 
HETATM 12 O O3A ATP . . . J 7 147.172 141.051 135.702 1 19.5 ? O3A ATP 402 C 1 
HETATM 13 O O5' ATP . . . J 7 145.754 140.867 137.685 1 19.5 ? O5' ATP 402 C 1 
HETATM 14 C C5' ATP . . . J 7 145.085 140.011 138.619 1 19.5 ? C5' ATP 402 C 1 
HETATM 15 C C4' ATP . . . J 7 143.66 140.473 138.773 1 19.5 ? C4' ATP 402 C 1 
HETATM 16 O O4' ATP . . . J 7 143.406 140.784 140.162 1 19.5 ? O4' ATP 402 C 1 
HETATM 17 C C3' ATP . . . J 7 143.295 141.771 138.066 1 19.5 ? C3' ATP 402 C 1 
HETATM 18 O O3' ATP . . . J 7 141.885 141.825 137.946 1 19.5 ? O3' ATP 402 C 1 
HETATM 19 C C2' ATP . . . J 7 143.825 142.81 139.049 1 19.5 ? C2' ATP 402 C 1 
HETATM 20 O O2' ATP . . . J 7 143.176 144.052 138.93 1 19.5 ? O2' ATP 402 C 1 
HETATM 21 C C1' ATP . . . J 7 143.528 142.165 140.393 1 19.5 ? C1' ATP 402 C 1 
HETATM 22 N N9 ATP . . . J 7 144.584 142.347 141.359 1 19.5 ? N9 ATP 402 C 1 
HETATM 23 C C8 ATP . . . J 7 145.926 142.358 141.135 1 19.5 ? C8 ATP 402 C 1 
HETATM 24 N N7 ATP . . . J 7 146.625 142.545 142.227 1 19.5 ? N7 ATP 402 C 1 
HETATM 25 C C5 ATP . . . J 7 145.673 142.689 143.224 1 19.5 ? C5 ATP 402 C 1 
HETATM 26 C C6 ATP . . . J 7 145.766 142.928 144.605 1 19.5 ? C6 ATP 402 C 1 
HETATM 27 N N6 ATP . . . J 7 146.912 143.074 145.256 1 19.5 ? N6 ATP 402 C 1 
HETATM 28 N N1 ATP . . . J 7 144.613 143.027 145.299 1 19.5 ? N1 ATP 402 C 1 
HETATM 29 C C2 ATP . . . J 7 143.458 142.888 144.643 1 19.5 ? C2 ATP 402 C 1 
HETATM 30 N N3 ATP . . . J 7 143.251 142.652 143.354 1 19.5 ? N3 ATP 402 C 1 
HETATM 31 C C4 ATP . . . J 7 144.413 142.568 142.694 1 19.5 ? C4 ATP 402 C 1 
#
_model_server_stats.io_time_ms              29 
_model_server_stats.parse_time_ms           32 
_model_server_stats.create_model_time_ms    37 
_model_server_stats.query_time_ms           936 
_model_server_stats.encode_time_ms          15 
_model_server_stats.element_count           31 
#