data_8K2I
#
_model_server_result.job_id            1rfeeXf6bn3k11J1QKGShg 
_model_server_result.datetime_utc      '2024-11-27 06:09:28' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8k2i 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":702}' 
#
_entry.id    8K2I 
#
_exptl.entry_id    8K2I 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              219.258 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            3AR,5R,6S,7R,7AR-5-HYDROXYMETHYL-2-METHYL-5,6,7,7A-TETRAHYDRO-3AH-PYRANO[3,2-D]THIAZOLE-6,7-DIOL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8K2I 
_cell.length_a            69.284 
_cell.length_b            133.833 
_cell.length_c            150.723 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8K2I 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,H 1 1 
B,E,F,G,I 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 F N N 
#
_chem_comp.formula           'C8 H13 N O4 S' 
_chem_comp.formula_weight    219.258 
_chem_comp.id                NGT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              3AR,5R,6S,7R,7AR-5-HYDROXYMETHYL-2-METHYL-5,6,7,7A-TETRAHYDRO-3AH-PYRANO[3,2-D]THIAZOLE-6,7-DIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 NGT sing 237 n n 
C1 S1 NGT sing 238 n n 
C1 O5 NGT sing 239 n n 
C1 HC1 NGT sing 240 n n 
C2 C3 NGT sing 241 n n 
C2 N2 NGT sing 242 n n 
C2 HC2 NGT sing 243 n n 
C3 C4 NGT sing 244 n n 
C3 O3 NGT sing 245 n n 
C3 HC3 NGT sing 246 n n 
C4 C5 NGT sing 247 n n 
C4 O4 NGT sing 248 n n 
C4 HC4 NGT sing 249 n n 
C5 C6 NGT sing 250 n n 
C5 O5 NGT sing 251 n n 
C5 HC5 NGT sing 252 n n 
C6 O6 NGT sing 253 n n 
C6 HC61 NGT sing 254 n n 
C6 HC62 NGT sing 255 n n 
C7 C8 NGT sing 256 n n 
C7 N2 NGT doub 257 n n 
C7 S1 NGT sing 258 n n 
C8 HC81 NGT sing 259 n n 
C8 HC82 NGT sing 260 n n 
C8 HC83 NGT sing 261 n n 
O3 HO3 NGT sing 262 n n 
O4 HO4 NGT sing 263 n n 
O6 HO6 NGT sing 264 n n 
#
_atom_sites.entry_id                     8K2I 
_atom_sites.fract_transf_matrix[1][1]    0.014433 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007472 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006635 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 PEG B 1 701 702 PEG PEG . 
D 3 NGT B 1 702 703 NGT NGT . 
E 2 PEG A 1 701 702 PEG PEG . 
F 3 NGT A 1 702 703 NGT NGT . 
G 4 CL A 1 703 1 CL CL . 
H 5 HOH B 1 801 110 HOH HOH . 
H 5 HOH B 2 802 95 HOH HOH . 
H 5 HOH B 3 803 126 HOH HOH . 
H 5 HOH B 4 804 52 HOH HOH . 
H 5 HOH B 5 805 161 HOH HOH . 
H 5 HOH B 6 806 200 HOH HOH . 
H 5 HOH B 7 807 53 HOH HOH . 
H 5 HOH B 8 808 155 HOH HOH . 
H 5 HOH B 9 809 232 HOH HOH . 
H 5 HOH B 10 810 40 HOH HOH . 
H 5 HOH B 11 811 235 HOH HOH . 
H 5 HOH B 12 812 25 HOH HOH . 
H 5 HOH B 13 813 132 HOH HOH . 
H 5 HOH B 14 814 203 HOH HOH . 
H 5 HOH B 15 815 125 HOH HOH . 
H 5 HOH B 16 816 56 HOH HOH . 
H 5 HOH B 17 817 22 HOH HOH . 
H 5 HOH B 18 818 158 HOH HOH . 
H 5 HOH B 19 819 88 HOH HOH . 
H 5 HOH B 20 820 187 HOH HOH . 
H 5 HOH B 21 821 196 HOH HOH . 
H 5 HOH B 22 822 236 HOH HOH . 
H 5 HOH B 23 823 179 HOH HOH . 
H 5 HOH B 24 824 140 HOH HOH . 
H 5 HOH B 25 825 162 HOH HOH . 
H 5 HOH B 26 826 174 HOH HOH . 
H 5 HOH B 27 827 114 HOH HOH . 
H 5 HOH B 28 828 198 HOH HOH . 
H 5 HOH B 29 829 39 HOH HOH . 
H 5 HOH B 30 830 184 HOH HOH . 
H 5 HOH B 31 831 55 HOH HOH . 
H 5 HOH B 32 832 231 HOH HOH . 
H 5 HOH B 33 833 23 HOH HOH . 
H 5 HOH B 34 834 212 HOH HOH . 
H 5 HOH B 35 835 224 HOH HOH . 
H 5 HOH B 36 836 17 HOH HOH . 
H 5 HOH B 37 837 182 HOH HOH . 
H 5 HOH B 38 838 33 HOH HOH . 
H 5 HOH B 39 839 70 HOH HOH . 
H 5 HOH B 40 840 170 HOH HOH . 
H 5 HOH B 41 841 119 HOH HOH . 
H 5 HOH B 42 842 171 HOH HOH . 
H 5 HOH B 43 843 117 HOH HOH . 
H 5 HOH B 44 844 59 HOH HOH . 
H 5 HOH B 45 845 168 HOH HOH . 
H 5 HOH B 46 846 112 HOH HOH . 
H 5 HOH B 47 847 163 HOH HOH . 
H 5 HOH B 48 848 156 HOH HOH . 
H 5 HOH B 49 849 134 HOH HOH . 
H 5 HOH B 50 850 44 HOH HOH . 
H 5 HOH B 51 851 185 HOH HOH . 
H 5 HOH B 52 852 241 HOH HOH . 
H 5 HOH B 53 853 105 HOH HOH . 
H 5 HOH B 54 854 109 HOH HOH . 
H 5 HOH B 55 855 64 HOH HOH . 
H 5 HOH B 56 856 118 HOH HOH . 
H 5 HOH B 57 857 47 HOH HOH . 
H 5 HOH B 58 858 104 HOH HOH . 
H 5 HOH B 59 859 37 HOH HOH . 
H 5 HOH B 60 860 43 HOH HOH . 
H 5 HOH B 61 861 3 HOH HOH . 
H 5 HOH B 62 862 133 HOH HOH . 
H 5 HOH B 63 863 166 HOH HOH . 
H 5 HOH B 64 864 164 HOH HOH . 
H 5 HOH B 65 865 75 HOH HOH . 
H 5 HOH B 66 866 207 HOH HOH . 
H 5 HOH B 67 867 115 HOH HOH . 
H 5 HOH B 68 868 42 HOH HOH . 
H 5 HOH B 69 869 80 HOH HOH . 
H 5 HOH B 70 870 222 HOH HOH . 
H 5 HOH B 71 871 74 HOH HOH . 
H 5 HOH B 72 872 213 HOH HOH . 
H 5 HOH B 73 873 20 HOH HOH . 
H 5 HOH B 74 874 130 HOH HOH . 
H 5 HOH B 75 875 165 HOH HOH . 
H 5 HOH B 76 876 204 HOH HOH . 
H 5 HOH B 77 877 129 HOH HOH . 
H 5 HOH B 78 878 67 HOH HOH . 
H 5 HOH B 79 879 208 HOH HOH . 
H 5 HOH B 80 880 128 HOH HOH . 
H 5 HOH B 81 881 58 HOH HOH . 
H 5 HOH B 82 882 144 HOH HOH . 
H 5 HOH B 83 883 78 HOH HOH . 
H 5 HOH B 84 884 152 HOH HOH . 
H 5 HOH B 85 885 215 HOH HOH . 
H 5 HOH B 86 886 169 HOH HOH . 
H 5 HOH B 87 887 91 HOH HOH . 
H 5 HOH B 88 888 159 HOH HOH . 
H 5 HOH B 89 889 24 HOH HOH . 
H 5 HOH B 90 890 137 HOH HOH . 
H 5 HOH B 91 891 183 HOH HOH . 
H 5 HOH B 92 892 4 HOH HOH . 
H 5 HOH B 93 893 76 HOH HOH . 
H 5 HOH B 94 894 45 HOH HOH . 
H 5 HOH B 95 895 123 HOH HOH . 
H 5 HOH B 96 896 210 HOH HOH . 
H 5 HOH B 97 897 223 HOH HOH . 
H 5 HOH B 98 898 154 HOH HOH . 
H 5 HOH B 99 899 27 HOH HOH . 
H 5 HOH B 100 900 18 HOH HOH . 
H 5 HOH B 101 901 36 HOH HOH . 
H 5 HOH B 102 902 218 HOH HOH . 
H 5 HOH B 103 903 214 HOH HOH . 
H 5 HOH B 104 904 46 HOH HOH . 
H 5 HOH B 105 905 103 HOH HOH . 
H 5 HOH B 106 906 111 HOH HOH . 
H 5 HOH B 107 907 69 HOH HOH . 
H 5 HOH B 108 908 13 HOH HOH . 
H 5 HOH B 109 909 237 HOH HOH . 
H 5 HOH B 110 910 121 HOH HOH . 
H 5 HOH B 111 911 83 HOH HOH . 
H 5 HOH B 112 912 216 HOH HOH . 
H 5 HOH B 113 913 14 HOH HOH . 
H 5 HOH B 114 914 12 HOH HOH . 
H 5 HOH B 115 915 97 HOH HOH . 
H 5 HOH B 116 916 233 HOH HOH . 
H 5 HOH B 117 917 217 HOH HOH . 
H 5 HOH B 118 918 239 HOH HOH . 
H 5 HOH B 119 919 131 HOH HOH . 
H 5 HOH B 120 920 226 HOH HOH . 
H 5 HOH B 121 921 2 HOH HOH . 
H 5 HOH B 122 922 127 HOH HOH . 
H 5 HOH B 123 923 230 HOH HOH . 
H 5 HOH B 124 924 116 HOH HOH . 
H 5 HOH B 125 925 195 HOH HOH . 
H 5 HOH B 126 926 6 HOH HOH . 
H 5 HOH B 127 927 146 HOH HOH . 
H 5 HOH B 128 928 73 HOH HOH . 
H 5 HOH B 129 929 202 HOH HOH . 
H 5 HOH B 130 930 157 HOH HOH . 
H 5 HOH B 131 931 15 HOH HOH . 
H 5 HOH B 132 932 34 HOH HOH . 
H 5 HOH B 133 933 77 HOH HOH . 
H 5 HOH B 134 934 145 HOH HOH . 
H 5 HOH B 135 935 211 HOH HOH . 
H 5 HOH B 136 936 141 HOH HOH . 
I 5 HOH A 1 801 113 HOH HOH . 
I 5 HOH A 2 802 50 HOH HOH . 
I 5 HOH A 3 803 142 HOH HOH . 
I 5 HOH A 4 804 151 HOH HOH . 
I 5 HOH A 5 805 54 HOH HOH . 
I 5 HOH A 6 806 138 HOH HOH . 
I 5 HOH A 7 807 100 HOH HOH . 
I 5 HOH A 8 808 175 HOH HOH . 
I 5 HOH A 9 809 89 HOH HOH . 
I 5 HOH A 10 810 49 HOH HOH . 
I 5 HOH A 11 811 65 HOH HOH . 
I 5 HOH A 12 812 38 HOH HOH . 
I 5 HOH A 13 813 102 HOH HOH . 
I 5 HOH A 14 814 199 HOH HOH . 
I 5 HOH A 15 815 150 HOH HOH . 
I 5 HOH A 16 816 234 HOH HOH . 
I 5 HOH A 17 817 93 HOH HOH . 
I 5 HOH A 18 818 219 HOH HOH . 
I 5 HOH A 19 819 96 HOH HOH . 
I 5 HOH A 20 820 176 HOH HOH . 
I 5 HOH A 21 821 191 HOH HOH . 
I 5 HOH A 22 822 62 HOH HOH . 
I 5 HOH A 23 823 177 HOH HOH . 
I 5 HOH A 24 824 186 HOH HOH . 
I 5 HOH A 25 825 66 HOH HOH . 
I 5 HOH A 26 826 90 HOH HOH . 
I 5 HOH A 27 827 205 HOH HOH . 
I 5 HOH A 28 828 197 HOH HOH . 
I 5 HOH A 29 829 173 HOH HOH . 
I 5 HOH A 30 830 79 HOH HOH . 
I 5 HOH A 31 831 30 HOH HOH . 
I 5 HOH A 32 832 220 HOH HOH . 
I 5 HOH A 33 833 61 HOH HOH . 
I 5 HOH A 34 834 32 HOH HOH . 
I 5 HOH A 35 835 51 HOH HOH . 
I 5 HOH A 36 836 189 HOH HOH . 
I 5 HOH A 37 837 41 HOH HOH . 
I 5 HOH A 38 838 180 HOH HOH . 
I 5 HOH A 39 839 28 HOH HOH . 
I 5 HOH A 40 840 31 HOH HOH . 
I 5 HOH A 41 841 7 HOH HOH . 
I 5 HOH A 42 842 178 HOH HOH . 
I 5 HOH A 43 843 60 HOH HOH . 
I 5 HOH A 44 844 188 HOH HOH . 
I 5 HOH A 45 845 227 HOH HOH . 
I 5 HOH A 46 846 160 HOH HOH . 
I 5 HOH A 47 847 57 HOH HOH . 
I 5 HOH A 48 848 225 HOH HOH . 
I 5 HOH A 49 849 190 HOH HOH . 
I 5 HOH A 50 850 71 HOH HOH . 
I 5 HOH A 51 851 8 HOH HOH . 
I 5 HOH A 52 852 122 HOH HOH . 
I 5 HOH A 53 853 72 HOH HOH . 
I 5 HOH A 54 854 81 HOH HOH . 
I 5 HOH A 55 855 29 HOH HOH . 
I 5 HOH A 56 856 85 HOH HOH . 
I 5 HOH A 57 857 86 HOH HOH . 
I 5 HOH A 58 858 192 HOH HOH . 
I 5 HOH A 59 859 181 HOH HOH . 
I 5 HOH A 60 860 84 HOH HOH . 
I 5 HOH A 61 861 10 HOH HOH . 
I 5 HOH A 62 862 107 HOH HOH . 
I 5 HOH A 63 863 172 HOH HOH . 
I 5 HOH A 64 864 92 HOH HOH . 
I 5 HOH A 65 865 167 HOH HOH . 
I 5 HOH A 66 866 16 HOH HOH . 
I 5 HOH A 67 867 149 HOH HOH . 
I 5 HOH A 68 868 153 HOH HOH . 
I 5 HOH A 69 869 98 HOH HOH . 
I 5 HOH A 70 870 5 HOH HOH . 
I 5 HOH A 71 871 229 HOH HOH . 
I 5 HOH A 72 872 120 HOH HOH . 
I 5 HOH A 73 873 139 HOH HOH . 
I 5 HOH A 74 874 201 HOH HOH . 
I 5 HOH A 75 875 148 HOH HOH . 
I 5 HOH A 76 876 206 HOH HOH . 
I 5 HOH A 77 877 11 HOH HOH . 
I 5 HOH A 78 878 35 HOH HOH . 
I 5 HOH A 79 879 136 HOH HOH . 
I 5 HOH A 80 880 21 HOH HOH . 
I 5 HOH A 81 881 63 HOH HOH . 
I 5 HOH A 82 882 68 HOH HOH . 
I 5 HOH A 83 883 106 HOH HOH . 
I 5 HOH A 84 884 221 HOH HOH . 
I 5 HOH A 85 885 101 HOH HOH . 
I 5 HOH A 86 886 99 HOH HOH . 
I 5 HOH A 87 887 240 HOH HOH . 
I 5 HOH A 88 888 108 HOH HOH . 
I 5 HOH A 89 889 9 HOH HOH . 
I 5 HOH A 90 890 143 HOH HOH . 
I 5 HOH A 91 891 209 HOH HOH . 
I 5 HOH A 92 892 238 HOH HOH . 
I 5 HOH A 93 893 48 HOH HOH . 
I 5 HOH A 94 894 228 HOH HOH . 
I 5 HOH A 95 895 1 HOH HOH . 
I 5 HOH A 96 896 94 HOH HOH . 
I 5 HOH A 97 897 19 HOH HOH . 
I 5 HOH A 98 898 87 HOH HOH . 
I 5 HOH A 99 899 193 HOH HOH . 
I 5 HOH A 100 900 26 HOH HOH . 
I 5 HOH A 101 901 194 HOH HOH . 
I 5 HOH A 102 902 147 HOH HOH . 
I 5 HOH A 103 903 135 HOH HOH . 
I 5 HOH A 104 904 82 HOH HOH . 
I 5 HOH A 105 905 124 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 NGT . . . F 3 -14.157 6.11 -4.521 1 51.56 ? C1 NGT 702 A 1 
HETATM 2 C C2 NGT . . . F 3 -15.624 5.677 -4.76 1 44.94 ? C2 NGT 702 A 1 
HETATM 3 C C3 NGT . . . F 3 -15.845 5.185 -6.187 1 45.89 ? C3 NGT 702 A 1 
HETATM 4 C C4 NGT . . . F 3 -15.302 6.264 -7.137 1 50.67 ? C4 NGT 702 A 1 
HETATM 5 C C5 NGT . . . F 3 -13.762 6.365 -6.916 1 45.61 ? C5 NGT 702 A 1 
HETATM 6 C C6 NGT . . . F 3 -13.088 7.401 -7.782 1 45.18 ? C6 NGT 702 A 1 
HETATM 7 C C7 NGT . . . F 3 -14.967 3.878 -3.507 1 48.84 ? C7 NGT 702 A 1 
HETATM 8 C C8 NGT . . . F 3 -14.984 2.597 -2.736 1 51.43 ? C8 NGT 702 A 1 
HETATM 9 N N2 NGT . . . F 3 -15.98 4.598 -3.802 1 41.66 ? N2 NGT 702 A 1 
HETATM 10 S S1 NGT . . . F 3 -13.417 4.467 -4.038 1 45.28 ? S1 NGT 702 A 1 
HETATM 11 O O3 NGT . . . F 3 -17.231 4.958 -6.423 1 46.5 ? O3 NGT 702 A 1 
HETATM 12 O O4 NGT . . . F 3 -15.609 5.96 -8.518 1 41.52 ? O4 NGT 702 A 1 
HETATM 13 O O5 NGT . . . F 3 -13.459 6.791 -5.574 1 45.44 ? O5 NGT 702 A 1 
HETATM 14 O O6 NGT . . . F 3 -11.738 7.637 -7.438 1 43.66 ? O6 NGT 702 A 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    29 
_model_server_stats.query_time_ms           290 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           14 
#