data_8K2V # _model_server_result.job_id 67clRf5xFI4aCEoceyMuMA _model_server_result.datetime_utc '2024-10-25 20:25:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8k2v # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":800}' # _entry.id 8K2V # _exptl.entry_id 8K2V _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 228.311 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-(HEXAHYDRO-2-OXO-1H-THIENO[3,4-D]IMIDAZOL-6-YL)PENTANAL _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8K2V _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8K2V _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details 12-meric _pdbx_struct_assembly.oligomeric_count 12 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 M N N ? 3 N N N ? 3 O N N ? 3 P N N ? 3 Q N N ? 3 R N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A NZ LYS 681 A LYS 681 1_555 M C11 BTI . A BTI 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.464 ? covale ? covale2 B NZ LYS 681 B LYS 681 1_555 N C11 BTI . B BTI 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.465 ? covale ? covale3 C NZ LYS 681 C LYS 681 1_555 O C11 BTI . C BTI 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.464 ? covale ? covale4 D NZ LYS 681 D LYS 681 1_555 P C11 BTI . D BTI 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.464 ? covale ? covale5 E NZ LYS 681 E LYS 681 1_555 Q C11 BTI . E BTI 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.463 ? covale ? covale6 F NZ LYS 681 F LYS 681 1_555 R C11 BTI . F BTI 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.465 ? # _chem_comp.formula 'C10 H16 N2 O2 S' _chem_comp.formula_weight 228.311 _chem_comp.id BTI _chem_comp.mon_nstd_flag . _chem_comp.name 5-(HEXAHYDRO-2-OXO-1H-THIENO[3,4-D]IMIDAZOL-6-YL)PENTANAL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C11 O11 BTI doub 161 n n C11 C10 BTI sing 162 n n C11 H11 BTI sing 163 n n C10 C9 BTI sing 164 n n C10 H102 BTI sing 165 n n C10 H103 BTI sing 166 n n C9 C8 BTI sing 167 n n C9 H92 BTI sing 168 n n C9 H93 BTI sing 169 n n C8 C7 BTI sing 170 n n C8 H82 BTI sing 171 n n C8 H83 BTI sing 172 n n C7 C2 BTI sing 173 n n C7 H72 BTI sing 174 n n C7 H73 BTI sing 175 n n C2 S1 BTI sing 176 n n C2 C4 BTI sing 177 n n C2 H2 BTI sing 178 n n S1 C6 BTI sing 179 n n C6 C5 BTI sing 180 n n C6 H62 BTI sing 181 n n C6 H63 BTI sing 182 n n C5 N3 BTI sing 183 n n C5 C4 BTI sing 184 n n C5 H5 BTI sing 185 n n N3 C3 BTI sing 186 n n N3 HN3 BTI sing 187 n n C3 O3 BTI doub 188 n n C3 N2 BTI sing 189 n n N2 C4 BTI sing 190 n n N2 HN2 BTI sing 191 n n C4 H4 BTI sing 192 n n # _atom_sites.entry_id 8K2V _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 3 BTI A 1 800 800 BTI BTI . N 3 BTI B 1 800 800 BTI BTI . O 3 BTI C 1 800 800 BTI BTI . P 3 BTI D 1 800 800 BTI BTI . Q 3 BTI E 1 800 800 BTI BTI . R 3 BTI F 1 800 800 BTI BTI . S 4 ACO G 1 601 601 ACO ACO . T 4 ACO I 1 601 601 ACO ACO . U 4 ACO J 1 601 601 ACO ACO . V 4 ACO K 1 601 601 ACO ACO . W 4 ACO L 1 601 601 ACO ACO . X 4 ACO H 1 601 601 ACO ACO . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C11 BTI . . . O 3 226.18 166.688 177.728 1 241.18 ? C11 BTI 800 C 1 HETATM 2 O O11 BTI . . . O 3 227.128 165.917 177.724 1 241.18 ? O11 BTI 800 C 1 HETATM 3 C C10 BTI . . . O 3 225.17 166.652 176.601 1 241.18 ? C10 BTI 800 C 1 HETATM 4 C C9 BTI . . . O 3 223.762 166.66 177.184 1 241.18 ? C9 BTI 800 C 1 HETATM 5 C C8 BTI . . . O 3 223.035 165.34 176.968 1 241.18 ? C8 BTI 800 C 1 HETATM 6 C C7 BTI . . . O 3 221.541 165.526 177.189 1 241.18 ? C7 BTI 800 C 1 HETATM 7 C C2 BTI . . . O 3 220.833 164.182 177.232 1 241.18 ? C2 BTI 800 C 1 HETATM 8 S S1 BTI . . . O 3 221.373 163.177 175.892 1 241.18 ? S1 BTI 800 C 1 HETATM 9 C C6 BTI . . . O 3 219.849 162.317 175.718 1 241.18 ? C6 BTI 800 C 1 HETATM 10 C C5 BTI . . . O 3 218.753 163.235 176.229 1 241.18 ? C5 BTI 800 C 1 HETATM 11 N N3 BTI . . . O 3 218.136 163.961 175.14 1 241.18 ? N3 BTI 800 C 1 HETATM 12 C C3 BTI . . . O 3 218.268 165.272 175.297 1 241.18 ? C3 BTI 800 C 1 HETATM 13 O O3 BTI . . . O 3 217.793 166.112 174.55 1 241.18 ? O3 BTI 800 C 1 HETATM 14 N N2 BTI . . . O 3 218.979 165.543 176.383 1 241.18 ? N2 BTI 800 C 1 HETATM 15 C C4 BTI . . . O 3 219.329 164.337 177.105 1 241.18 ? C4 BTI 800 C 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 37 _model_server_stats.query_time_ms 264 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 15 #